Frontiers in Bioinformatics | Data Visualization

Original Research

Published on 31 Jan 2022

New Approach to Accelerated Image Annotation by Leveraging Virtual Reality and Cloud Computing

in Data Visualization

Corentin Guérinot
Valentin Marcon
Charlotte Godard
Thomas Blanc
Hippolyte Verdier
Guillaume Planchon
Francesca Raimondi
Nathalie Boddaert
Mariana Alonso
Kurt Sailor

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.777101

6,412 views
10 citations

Original Research

Published on 26 Jan 2022

Interactive, Visual Simulation of a Spatio-Temporal Model of Gas Exchange in the Human Alveolus

in Data Visualization

Kerstin Schmid
Andreas Knote
Alexander Mück
Keram Pfeiffer
Sebastian von Mammen
Sabine C. Fischer

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.774300

8,354 views
6 citations

Methods

Published on 20 Jan 2022

Towards Human in the Loop Analysis of Complex Point Clouds: Advanced Visualizations, Quantifications, and Communication Features in Virtual Reality

in Data Visualization

Thomas Blanc
Hippolyte Verdier
Louise Regnier
Guillaume Planchon
Corentin Guérinot
Mohamed El Beheiry
Jean-Baptiste Masson
Bassam Hajj

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.775379

4,720 views
7 citations

Original Research

Published on 10 Jan 2022

Extending Association Rule Mining to Microbiome Pattern Analysis: Tools and Guidelines to Support Real Applications

in Data Visualization

Agostinetto Giulia
Sandionigi Anna
Bruno Antonia
Pescini Dario
Casiraghi Maurizio

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.794547

5,488 views
8 citations

Brief Research Report

Published on 13 Dec 2021

Visualizing Phytochemical-Protein Interaction Networks: Momordica charantia and Cancer

in Data Visualization

Yumi L. Briones
Alexander T. Young
Fabian M. Dayrit
Armando Jerome De Jesus
Nina Rosario L. Rojas

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.768886

8,494 views
2 citations

Review

Published on 08 Dec 2021

Cryo-EM Analyses Permit Visualization of Structural Polymorphism of Biological Macromolecules

in Data Visualization

Wei-Hau Chang
Shih-Hsin Huang
Hsin-Hung Lin
Szu-Chi Chung
I-Ping Tu

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.788308

6,104 views
10 citations

Review

Published on 02 Dec 2021

Exploring the Microbiome Analysis and Visualization Landscape

in Data Visualization

Jannes Peeters
Olivier Thas
Ziv Shkedy
Leyla Kodalci
Connie Musisi
Olajumoke Evangelina Owokotomo
Aleksandra Dyczko
Ibrahim Hamad
Jaco Vangronsveld
Markus Kleinewietfeld

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.774631

34,297 views
16 citations

Technology and Code

Published on 25 Nov 2021

GeneCloudOmics: A Data Analytic Cloud Platform for High-Throughput Gene Expression Analysis

in Data Visualization

Mohamed Helmy
Rahul Agrawal
Javed Ali
Mohamed Soudy
Thuy Tien Bui
Kumar Selvarajoo

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.693836

19,680 views
8 citations

Original Research

Published on 08 Nov 2021

VTR: A Web Tool for Identifying Analogous Contacts on Protein Structures and Their Complexes

in Data Visualization

Vitor Pimentel
Diego Mariano
Letícia Xavier Silva Cantão
Luana Luiza Bastos
Pedro Fischer
Leonardo Henrique Franca de Lima
Alexandre Victor Fassio
Raquel Cardoso de Melo-Minardi

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.730350

9,244 views
12 citations

Technology and Code

Published on 25 Aug 2021

Peptimetric: Quantifying and Visualizing Differences in Peptidomic Data

in Data Visualization

Erik Hartman
Simon Mahdavi
Sven Kjellström
Artur Schmidtchen

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.722466

5,180 views
1 citation

Specialty Grand Challenge

Published on 17 Jun 2021

Grand Challenges in Bioinformatics Data Visualization

in Data Visualization

Seán I. O'Donoghue

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.669186

22,738 views
41 citations

Brief Research Report

Published on 01 Apr 2021

Summary Visualizations of Gene Ontology Terms With GO-Figure!

in Data Visualization

Maarten J. M. F. Reijnders
Robert M. Waterhouse

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.638255

69,306 views
120 citations

Methods

Published on 29 Mar 2021

CellPAINT: Turnkey Illustration of Molecular Cell Biology

in Data Visualization

Adam Gardner
Ludovic Autin
Daniel Fuentes
Martina Maritan
Benjamin A. Barad
Michaela Medina
Arthur J. Olson
Danielle A. Grotjahn
David S. Goodsell

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.660936

23,390 views
22 citations

61 articles

articles

New Approach to Accelerated Image Annotation by Leveraging Virtual Reality and Cloud Computing

Interactive, Visual Simulation of a Spatio-Temporal Model of Gas Exchange in the Human Alveolus

Towards Human in the Loop Analysis of Complex Point Clouds: Advanced Visualizations, Quantifications, and Communication Features in Virtual Reality

Extending Association Rule Mining to Microbiome Pattern Analysis: Tools and Guidelines to Support Real Applications

Visualizing Phytochemical-Protein Interaction Networks: Momordica charantia and Cancer

Cryo-EM Analyses Permit Visualization of Structural Polymorphism of Biological Macromolecules

Exploring the Microbiome Analysis and Visualization Landscape

GeneCloudOmics: A Data Analytic Cloud Platform for High-Throughput Gene Expression Analysis

VTR: A Web Tool for Identifying Analogous Contacts on Protein Structures and Their Complexes

Peptimetric: Quantifying and Visualizing Differences in Peptidomic Data

Grand Challenges in Bioinformatics Data Visualization

Summary Visualizations of Gene Ontology Terms With GO-Figure!

CellPAINT: Turnkey Illustration of Molecular Cell Biology