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Articles

Original Research

Published on 28 Jan 2022

Identification of Master Regulators Driving Disease Progression, Relapse, and Drug Resistance in Lung Adenocarcinoma

in Genomic Analysis

Qiong Xu
Qiongfang Cha
Hui Qin
Bin Liu
Xueling Wu
Jiantao Shi

Identification of Master Regulators Driving Disease Progression, Relapse, and Drug Resistance in Lung Adenocarcinoma

Frontiers in Bioinformatics

doi 10.3389/fbinf.2022.813960

2,906 views
3 citations

Technology and Code

Published on 27 Jan 2022

RecruitPlotEasy: An Advanced Read Recruitment Plot Tool for Assessing Metagenomic Population Abundance and Genetic Diversity

in Genomic Analysis

Kenji Gerhardt
Carlos A. Ruiz-Perez
Luis M. Rodriguez-R
Roth E. Conrad
Konstantinos T. Konstantinidis

RecruitPlotEasy: An Advanced Read Recruitment Plot Tool for Assessing Metagenomic Population Abundance and Genetic Diversity

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.826701

4,292 views
5 citations

Perspective

Published on 18 Jan 2022

The Effect of Model Directionality on Cell-Type-Specific Differential DNA Methylation Analysis

in Genomic Analysis

Elior Rahmani
Brandon Jew
Eran Halperin

The Effect of Model Directionality on Cell-Type-Specific Differential DNA Methylation Analysis

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.792605

1,959 views
1 citation

Review

Published on 17 Jan 2022

Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale

in Genomic Analysis

Bin Hu
Shane Canon
Emiley A. Eloe-Fadrosh
Anubhav
Michal Babinski
Yuri Corilo
Karen Davenport
William D. Duncan
Kjiersten Fagnan
Mark Flynn

Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.826370

7,455 views
13 citations

Original Research

Published on 16 Dec 2021

HSDFinder: A BLAST-Based Strategy for Identifying Highly Similar Duplicated Genes in Eukaryotic Genomes

in Genomic Analysis

Xi Zhang
Yining Hu
David Roy Smith

HSDFinder: A BLAST-Based Strategy for Identifying Highly Similar Duplicated Genes in Eukaryotic Genomes

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.803176

3,980 views
7 citations

Methods

Published on 09 Dec 2021

StartLink and StartLink+: Prediction of Gene Starts in Prokaryotic Genomes

in Genomic Analysis

Karl Gemayel
Alexandre Lomsadze
Mark Borodovsky

StartLink and StartLink+: Prediction of Gene Starts in Prokaryotic Genomes

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.704157

2,499 views
1 citation

Opinion

Published on 06 Dec 2021

Releasing the Kraken

in Genomic Analysis

Steven L. Salzberg
Derrick E. Wood

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.808003

4,408 views
8 citations