Frontiers in Genetics

Original Research

Published on 18 Jun 2025

Benchmarking of feed-forward neural network models for genomic prediction of quantitative traits in pigs

in Livestock Genomics

Junjian Wang
Francesco Tiezzi
Yijian Huang
Christian Maltecca
Jicai Jiang

Frontiers in Genetics

doi 10.3389/fgene.2025.1618891

2,704 views
2 citations

Original Research

Published on 18 Jun 2025

Whole genome sequencing and functional annotation of Fusarium oxysporum f. sp. lentis to unravel virulence and secondary metabolite biosynthesis gene clusters

in Genomics of Plants and the Phytoecosystem

Sanjay Kharte
Ashish Kumar
Priyamvada Mishra
R. S. Ramakrishnan
Stuti Sharma
Nishi Mishra
Puneet Singh Chauhan
Radheshyam Sharma
Vedant Gautam
Shweta Tiwari

Frontiers in Genetics

doi 10.3389/fgene.2025.1585510

3,301 views

Original Research

Published on 18 Jun 2025

Application of non-invasive prenatal testing for fetal chromosomal disorders in low-risk pregnancies: a follow-up study in central China

in Genetics of Common and Rare Diseases

Qiuxiang Huang
Qiao Xu
Meihuan Chen
Wenli Fan
Hailong Huang

Frontiers in Genetics

doi 10.3389/fgene.2025.1574775

3,701 views

Case Report

Published on 17 Jun 2025

Case Report: Successful late-line pralsetinib treatment in an ALK-rearranged lung adenocarcinoma patient with KIF5B-RET fusion resistant to alectinib

in Pharmacogenetics and Pharmacogenomics

Feng Jin
Chenyang Wang
Fang Yang
Shubin Wang
Fen Wang

Frontiers in Genetics

doi 10.3389/fgene.2025.1569912

3,220 views

Original Research

Published on 17 Jun 2025

Transcriptomic analysis and machine learning modeling identifies novel biomarkers and genetic characteristics of hypertrophic cardiomyopathy

in Statistical Genetics and Methodology

Feng Zhang
Chunrui Li
Lulu Zhang

Frontiers in Genetics

doi 10.3389/fgene.2025.1596049

3,315 views

Original Research

Published on 13 Jun 2025

Reduced T-Cell stemness underlies Th17 expansion and graft dysfunction in kidney transplant recipients

in Stem Cell Research

Chang Liu
Hao Jiang
Andu Zhu
Chen Xu
Zhenfan Wang
Guocai Mao
Minjun Jiang
Jianchun Chen
Zheng Ma
Jiaqian Qi

Frontiers in Genetics

doi 10.3389/fgene.2025.1588941

2,562 views

Original Research

Published on 13 Jun 2025

The joint role of the immune microenvironment and N7-methylguanosine for prognosis prediction and targeted therapy in acute myeloid leukemia

in Cancer Genetics and Oncogenomics

Zhixiang Chen
Zhimei Chen
Xiaobo Huang
Xiongbin Yan
Xiaolin Lai
Shaoyuan Wang

Frontiers in Genetics

doi 10.3389/fgene.2025.1540992

2,820 views
1 citation

Case Report

Published on 13 Jun 2025

Genetic mutation and blue rubber bleb nevus syndrome: case reports and literature review

in Genetics of Common and Rare Diseases

Yueyi Xing
Han Liu
Hua Liu
Xueli Ding
Xue Jing

Frontiers in Genetics

doi 10.3389/fgene.2025.1516562

1,937 views

Original Research

Published on 12 Jun 2025

Identification of a novel AGO2 variant causing LESKRES in a Chinese family with intellectual disability

in Human and Medical Genomics

Shufa Yang
Wei Song
Yousheng Yan

Frontiers in Genetics

doi 10.3389/fgene.2025.1598462

2,034 views
1 citation

Original Research

Published on 12 Jun 2025

Metabolic reprogramming and prognostic modeling in pancreatic cancer: insights from WGCNA

in Cancer Genetics and Oncogenomics

Zhuo Song
Zhijia Sun
Yupeng Di
Xu Liu
Xiaoli Kang
Gang Ren
Yingjie Wang

Frontiers in Genetics

doi 10.3389/fgene.2025.1487046

1,717 views

Original Research

Published on 12 Jun 2025

Highly multiplexed molecular inversion probe panel in Plasmodium falciparum targeting common SNPs approximates whole-genome sequencing assessments for selection and relatedness

in Applied Genetic Epidemiology

Karamoko Niaré
Rebecca Crudale
Abebe A. Fola
Neeva Wernsman Young
Victor Asua
Melissa D. Conrad
Pierre Gashema
Anita Ghansah
Stan Hangi
Deus S. Ishengoma

Frontiers in Genetics

doi 10.3389/fgene.2025.1526049

2,737 views
4 citations

Original Research

Published on 12 Jun 2025

Genetic and codon usage analyses reveal the evolution of the seoul virus

in Evolutionary and Population Genetics

Yamei Wei
Yanan Cai
Xu Han
Zhanying Han
Yanbo Zhang
Yonggang Xu
Caixiao Jiang
Qi Li

Frontiers in Genetics

doi 10.3389/fgene.2025.1544577

2,227 views

Original Research

Published on 12 Jun 2025

Identification of the U-box gene family in peach (Prunus persica) and functional analysis of PpPUB20 in response to salt stress

in Genomics of Plants and the Phytoecosystem

Huiwen Zhang
Ruxuan Guo
Xiaoshuang Zhang
Chongyu Zhao
Junkai Wu
Xiao Xiao
Yanhong Shen
Chunsheng Liu
Gang Li
Kai Su

Frontiers in Genetics

doi 10.3389/fgene.2025.1549981

1,923 views

Original Research

Published on 12 Jun 2025

Parentage assignment in black soldier fly (Hermetia illucens) using genotyping-by-sequencing

in Livestock Genomics

Guyllaume Dufresne
Catherine Bolduc
Christopher Warburton
Grant Vandenberg
Marie-Hélène Deschamps
Nabeel Alnahhas

Frontiers in Genetics

doi 10.3389/fgene.2025.1541812

2,268 views

Original Research

Published on 11 Jun 2025

RPMB predicts the disease-free survival of head-and-neck squamous carcinoma after adjuvant concurrent radio-chemotherapy

in Cancer Genetics and Oncogenomics

Ning An
Yongchun Zhang
Haijun Lu
Xue Yang

Frontiers in Genetics

doi 10.3389/fgene.2025.1585970

1,624 views

Original Research

Published on 11 Jun 2025

Gene expression profiling of SPIN1 in gastric cancer: insights into tumorigenesis and potential therapeutic targets

in Cancer Genetics and Oncogenomics

Bei-Bei Lv
Lei Cai
Yao Xiao
Rui-Han Wang
Xiao-Yan Lin

Frontiers in Genetics

doi 10.3389/fgene.2025.1510849

2,251 views

Systematic Review

Published on 11 Jun 2025

Exome sequencing and prenatal skeletal abnormalities: comprehensive review and meta-analysis and way forward

in Cytogenomics

Mengting Jiang
Bin Zhang
Jing Wang
Cui Wei
Xiuzhen Mao
Bin Yu

Frontiers in Genetics

doi 10.3389/fgene.2025.1502538

2,353 views

Original Research

Published on 11 Jun 2025

iKcr-DRC: prediction of lysine crotonylation sites in proteins based on a novel attention module and DenseNet

in Computational Genomics

Xin Wei
Siqin Hu
Jian Tu
Muhammad Akmal Remli

Frontiers in Genetics

doi 10.3389/fgene.2025.1574832

1,757 views

Original Research

Published on 11 Jun 2025

A comprehensive splicing characterization of COL4A5 mutations and prognostic significance in a single cohort with X-linked alport syndrome

in Genetics of Common and Rare Diseases

Haomiao Li
Shengnan Zhang
Wei Zhou
Chunli Wang
Chunhua Zhu
Sanlong Zhao
Fei Zhao
Zhanjun Jia
Aihua Zhang
Bixia Zheng

Frontiers in Genetics

doi 10.3389/fgene.2025.1564343

2,366 views

Original Research

Published on 11 Jun 2025

Machine learning driven multi-omics analysis of the genetic mechanisms behind the double-coat fleece formation in Hetian sheep

in Livestock Genomics

Yanwei Zhang
Wenrong Li
Xinming Xu
Mengwan Xie
Liping Tang
Peiyu Zheng
Nannan Song
Lijuan Yu
Jiang Di

Frontiers in Genetics

doi 10.3389/fgene.2025.1582244

2,457 views
1 citation

Brief Research Report

Published on 11 Jun 2025

Allelic dropout in the endoglin (ENG) gene caused by common duplication beyond the primer binding site

in Human and Medical Genomics

Anna G. Shestak
Victoria A. Rumyantseva
Elena V. Zaklyazminskaya

Frontiers in Genetics

doi 10.3389/fgene.2025.1571437

2,131 views
1 citation

Original Research

Published on 10 Jun 2025

Silent but significant: Functional elucidation of a synonymous ATP7B mutation in Wilson’s disease pedigrees

in Statistical Genetics and Methodology

Qi Zhang
Xiaoming Xie
Hairong Li
Yulei Li
Hongyao Huang

Frontiers in Genetics

doi 10.3389/fgene.2025.1604683

2,300 views

Original Research

Published on 10 Jun 2025

Auto-branch multi-task learning for simultaneous prediction of multiple correlated traits associated with Alzheimer’s disease

in Computational Genomics

Jiaqi Liang
Zhao Xue
Wenchao Zhou
Xiangjie Guo
Yalu Wen

Frontiers in Genetics

doi 10.3389/fgene.2025.1538544

1,631 views

Original Research

Published on 10 Jun 2025

Genome-wide association study of cocoon-producing traits in four Henan silkworm strains revealed new candidate genes

in Evolutionary and Population Genetics

Xingya Song
Yingxian Lyu
Yuqiao Zhang
Wenjia Ding
Yongzhen Huang
Shang Yang

Frontiers in Genetics

doi 10.3389/fgene.2025.1580806

1,641 views

16,444 articles

articles

Benchmarking of feed-forward neural network models for genomic prediction of quantitative traits in pigs

Whole genome sequencing and functional annotation of Fusarium oxysporum f. sp. lentis to unravel virulence and secondary metabolite biosynthesis gene clusters

Application of non-invasive prenatal testing for fetal chromosomal disorders in low-risk pregnancies: a follow-up study in central China

Case Report: Successful late-line pralsetinib treatment in an ALK-rearranged lung adenocarcinoma patient with KIF5B-RET fusion resistant to alectinib

Transcriptomic analysis and machine learning modeling identifies novel biomarkers and genetic characteristics of hypertrophic cardiomyopathy

Reduced T-Cell stemness underlies Th17 expansion and graft dysfunction in kidney transplant recipients

The joint role of the immune microenvironment and N7-methylguanosine for prognosis prediction and targeted therapy in acute myeloid leukemia

Genetic mutation and blue rubber bleb nevus syndrome: case reports and literature review

Identification of a novel AGO2 variant causing LESKRES in a Chinese family with intellectual disability

Metabolic reprogramming and prognostic modeling in pancreatic cancer: insights from WGCNA

Highly multiplexed molecular inversion probe panel in Plasmodium falciparum targeting common SNPs approximates whole-genome sequencing assessments for selection and relatedness

Genetic and codon usage analyses reveal the evolution of the seoul virus

Identification of the U-box gene family in peach (Prunus persica) and functional analysis of PpPUB20 in response to salt stress

Parentage assignment in black soldier fly (Hermetia illucens) using genotyping-by-sequencing

RPMB predicts the disease-free survival of head-and-neck squamous carcinoma after adjuvant concurrent radio-chemotherapy

Gene expression profiling of SPIN1 in gastric cancer: insights into tumorigenesis and potential therapeutic targets

Exome sequencing and prenatal skeletal abnormalities: comprehensive review and meta-analysis and way forward

iKcr-DRC: prediction of lysine crotonylation sites in proteins based on a novel attention module and DenseNet

A comprehensive splicing characterization of COL4A5 mutations and prognostic significance in a single cohort with X-linked alport syndrome

Machine learning driven multi-omics analysis of the genetic mechanisms behind the double-coat fleece formation in Hetian sheep

Allelic dropout in the endoglin (ENG) gene caused by common duplication beyond the primer binding site

Silent but significant: Functional elucidation of a synonymous ATP7B mutation in Wilson’s disease pedigrees

Auto-branch multi-task learning for simultaneous prediction of multiple correlated traits associated with Alzheimer’s disease

Genome-wide association study of cocoon-producing traits in four Henan silkworm strains revealed new candidate genes