Frontiers in Genetics | Genomic Assay Technology

Original Research

Published on 15 Aug 2025

A Benchmark of methods for SARS-CoV-2 whole genome sequencing and development of a more sensitive method

in Genomic Assay Technology

Anthony Bayega
Sarah J. Reiling
Ju Ling Liu
Isabelle Dubuc
Annie Gravel
Louis Flamand
Jiannis Ragoussis

Frontiers in Genetics

doi 10.3389/fgene.2025.1516791

394 views

Original Research

Published on 14 Aug 2025

Cis-regulation analysis of RNA m6A methylation and gene expression in colorectal cancer

in Genomic Assay Technology

Zhen-Liang Lin
Pan-Pan Yu
Bei-Lei Ye

Frontiers in Genetics

doi 10.3389/fgene.2025.1622957

307 views

Methods

Published on 06 Aug 2025

High-throughput PacBio library preparation and sequencing techniques for genomic DNA and TNA

in Genomic Assay Technology

Meghan L. Bentz
Cristina Clines
Jasmine Padilla
Christopher Horn
Justin Lee
Mili Sheth

Frontiers in Genetics

doi 10.3389/fgene.2025.1587691

603 views

Review

Published on 02 Jul 2025

Get ready for short tandem repeats analysis using long reads-the challenges and the state of the art

in Genomic Assay Technology

Marija Chaushevska
Karmele Alapont-Celaya
Anne Kristine Schack
Lukasz Krych
M. Carmen Garrido Navas
Anastasia Krithara
Gjorgji Madjarov

Frontiers in Genetics

doi 10.3389/fgene.2025.1610026

1,710 views

Original Research

Published on 09 Apr 2025

An in vivo systemic massively parallel platform for deciphering animal tissue-specific regulatory function

in Genomic Assay Technology

Ashley R. Brown
Grant A. Fox
Irene M. Kaplow
Alyssa J. Lawler
BaDoi N. Phan
Lahari Gadey
Morgan E. Wirthlin
Easwaran Ramamurthy
Gemma E. May
Ziheng Chen

Frontiers in Genetics

doi 10.3389/fgene.2025.1533900

3,221 views
1 citation

Brief Research Report

Published on 02 Apr 2025

Optical genome mapping with whole genome sequencing identifies complex chromosomal structural variations in acute leukemia

in Genomic Assay Technology

Meng-Ju Melody Tsai
Hsiao-Jung Kao
Hsiao-Huei Chen
Chih-Hsiang Yu
Yin-Hsiu Chien
Wuh-Liang Hwu
Pui-Yan Kwok
Ni-Chung Lee
Yung-Li Yang

Frontiers in Genetics

doi 10.3389/fgene.2025.1496847

2,385 views

Original Research

Published on 26 Feb 2025

Comparative genomics of three non-hematophagous leeches (Whitmania spp.) with emphasis on antithrombotic biomolecules

in Genomic Assay Technology

Fang Zhao
Zuhao Huang
Lizhou Tang
Wenting Zhang
Zichao Liu
Gonghua Lin

Frontiers in Genetics

doi 10.3389/fgene.2025.1548006

1,199 views

Correction

Published on 21 Jan 2025

Corrigendum: Set of 15 SNP-SNP markers for detection of unbalanced degraded DNA mixtures and noninvasive prenatal paternity testing

in Genomic Assay Technology

Ranran Zhang
Yu Tan
Li Wang
Hui Jian
Jing Zhu
Yuanyuan Xiao
Mengyu Tan
Jiaming Xue
Fan Yang
Weibo Liang

Frontiers in Genetics

doi 10.3389/fgene.2025.1553186

1,095 views

Original Research

Published on 06 Jan 2025

Evaluation of controls, quality control assays, and protocol optimisations for PacBio HiFi sequencing on diverse and challenging samples

in Genomic Assay Technology

Iraad F. Bronner
Emma Dawson
Naomi Park
Olaf Piepenburg
Michael A. Quail

Frontiers in Genetics

doi 10.3389/fgene.2024.1505839

2,257 views

Review

Published on 28 Nov 2024

Application of next-generation sequencing in the detection of transgenic crop

in Genomic Assay Technology

Shitian He
Yueyuan Fan
Shaomin Tao
Yanxia Zhang
Chuanlin Yin
Xiaoping Yu

Frontiers in Genetics

doi 10.3389/fgene.2024.1461115

3,614 views

Original Research

Published on 06 Nov 2024

Clinical application of chromosome microarray analysis and karyotyping in prenatal diagnosis in Northwest China

in Genomic Assay Technology

ShuYuan Xue
YuTong Liu
LiXia Wang
Le Zhang
Bozhen Chang
GuiFeng Ding
PengGao Dai

Frontiers in Genetics

doi 10.3389/fgene.2024.1347942

2,436 views
1 citation

Review

Published on 02 Oct 2024

Prenatal finding of isolated ventricular septal defect: genetic association, outcomes and counseling

in Genomic Assay Technology

Xin Chen
Qian Zhang
Man Lu
Qiuxia Feng
Litao Qin
Shixiu Liao

Frontiers in Genetics

doi 10.3389/fgene.2024.1447216

3,478 views
1 citation

Brief Research Report

Published on 02 Aug 2024

Optical genome mapping identifies a homozygous deletion in the non-coding region of the SCN9A gene in individuals from the same family with congenital insensitivity to pain

in Genomic Assay Technology

Aïcha Boughalem
Viorica Ciorna-Monferrato
Natacha Sloboda
Amélie Guegan
François Page
Sophie Zimmer
Marion Benazra
Pascale Kleinfinger
Laurence Lohmann
Mylène Valduga

Frontiers in Genetics

doi 10.3389/fgene.2024.1375770

4,045 views

Original Research

Published on 07 Jun 2024

The performance evaluation of NIPT for fetal chromosome microdeletion/microduplication detection: a retrospective analysis of 68,588 Chinese cases

in Genomic Assay Technology

Shichun Shen
Haimei Qi
Xianping Yuan
Jinhui Gan
Junkun Chen
Jungao Huang

Frontiers in Genetics

doi 10.3389/fgene.2024.1390539

4,394 views
3 citations

Original Research

Published on 30 May 2024

Effect of clinical whole exome sequencing in aetiological investigation and reproductive risk prediction for a couple with monogenic inherited diseases

in Genomic Assay Technology

Yanan Wang
Yuqiong Chai
Jieqiong Wang
Mingya Gao
Weiwei Zang
Yujie Chang

Frontiers in Genetics

doi 10.3389/fgene.2024.1364769

1,437 views

Editorial

Published on 20 Mar 2024

Editorial: Novel applications of ONT technologies in genomics and transcriptomics

in Genomic Assay Technology

Eugenia Poliakov
Ludmila Kaplun
Igor B. Rogozin

Frontiers in Genetics

doi 10.3389/fgene.2024.1384584

2,622 views