Frontiers in Genetics | Genomics of Plants and the Phytoecosystem

Original Research

Accepted on 27 Jun 2025

Mechanism of nodulation and nitrogen fixation of Caucasian clover (Trifolium ambiguum Bieb.) based on transcriptomics and proteomics

in Genomics of Plants and the Phytoecosystem

Jiawei Liu
Xinyan Hao
Yue Guo
Mingjiu Wang
Fan Huang

Frontiers in Genetics

doi 10.3389/fgene.2025.1600377

Editorial

Accepted on 26 Jun 2025

Editorial: [Integrated Molecular Mechanisms of Plant Stress Responses: Insights from Transcriptomics, Metabolomics, and Gene Family Evolution]

in Genomics of Plants and the Phytoecosystem

Xiaobo Luo
Georgia Ntatsi
Rong Zhou
Mintao Sun

Frontiers in Genetics

doi 10.3389/fgene.2025.1607710

112 views

Original Research

Accepted on 24 Jun 2025

The Chloroplast Genome of the Peltigera elisabethae Photobiont Chloroidium sp. W5 and Its Phylogenetic Implications

in Genomics of Plants and the Phytoecosystem

Reyim Mamut
Guldiyar Adil
Shenglei Liu
Xiaoyan Bao

Frontiers in Genetics

doi 10.3389/fgene.2025.1602048

Original Research

Published on 18 Jun 2025

A xyloglucan endotransglucosylase/hydrolase gene, IbXTH16, increases cold tolerance in transgenic sweetpotato

in Genomics of Plants and the Phytoecosystem

Tao Yu
Jiaquan Pan
Sitong Liu
Zitong Yang
Zhenlei Liu

Frontiers in Genetics

doi 10.3389/fgene.2025.1629260

364 views

Original Research

Published on 18 Jun 2025

Whole genome sequencing and functional annotation of Fusarium oxysporum f. sp. lentis to unravel virulence and secondary metabolite biosynthesis gene clusters

in Genomics of Plants and the Phytoecosystem

Sanjay Kharte
Ashish Kumar
Priyamvada Mishra
R. S. Ramakrishnan
Stuti Sharma
Nishi Mishra
Puneet Singh Chauhan
Radheshyam Sharma
Vedant Gautam
Shweta Tiwari

Frontiers in Genetics

doi 10.3389/fgene.2025.1585510

926 views

Original Research

Accepted on 17 Jun 2025

Genome-wide identification of GATA family genes in sweet potato (Ipomoea batatas L.) and its expression pattern under abiotic stress

in Genomics of Plants and the Phytoecosystem

Chong Wang
Mengjiao Lan
Manqiu Xiao
Ying Peng
Hao Pan
Jiaqi Deng
Wensheng Wu

Frontiers in Genetics

doi 10.3389/fgene.2025.1635749

133 views

Original Research

Published on 12 Jun 2025

Identification of the U-box gene family in peach (Prunus persica) and functional analysis of PpPUB20 in response to salt stress

in Genomics of Plants and the Phytoecosystem

Huiwen Zhang
Ruxuan Guo
Xiaoshuang Zhang
Chongyu Zhao
Junkai Wu
Xiao Xiao
Yanhong Shen
Chunsheng Liu
Gang Li
Kai Su

Frontiers in Genetics

doi 10.3389/fgene.2025.1549981

756 views

Original Research

Accepted on 10 Jun 2025

Genome-wide association study and haplotype analyses reveal genetic architecture of agronomic traits and sugars in sweet sorghum

in Genomics of Plants and the Phytoecosystem

Abdullah Bin Umar
Ajay Prasanth Ramalingam
Bushra Sadia
Faisal Saeed Awan
Farooq Ahmad Khan
Mariam Nasir
Amy Bernardo
Paul St. Amand
Guihua Bai
P. V. Vara Prasad

Frontiers in Genetics

doi 10.3389/fgene.2025.1611863

277 views

Data Report

Published on 05 Jun 2025

K-rice: a comprehensive database of Korean rice germplasm variants

in Genomics of Plants and the Phytoecosystem

Jeong-Gu Kim
Gyu-Hwang Park
Jinhyun Kim
Jinho Jeong
Tae-Ho Lee

Frontiers in Genetics

doi 10.3389/fgene.2025.1544652

908 views

Original Research

Accepted on 03 Jun 2025

The Effect of Chinese herbal Medicines on the Storage Quality of Sweet Potatoes

in Genomics of Plants and the Phytoecosystem

Zengzhi Si
Fengrui Men
Yangyang Liu
Weicao Wang
Jiale Song

Frontiers in Genetics

doi 10.3389/fgene.2025.1623582

200 views

Original Research

Published on 30 May 2025

Effects of salinity stress on morphological structure, physiology, and mRNA expression in different wheat (Triticum aestivum L.) cultivars

in Genomics of Plants and the Phytoecosystem

Xiaohui Sun
Yuliu Tan
Yumei Zhang
Weiwei Guo
Ximei Li
Nataliia Golub
Lili Zhang
Huifang Wang

Frontiers in Genetics

doi 10.3389/fgene.2025.1535610

1,078 views

Original Research

Published on 29 May 2025

Elucidating the role of pyrabactin-like receptors of finger millet under drought and salinity stress: an insight into in silico, machine learning and molecular approaches

in Genomics of Plants and the Phytoecosystem

Varsha Rani
Theivanayagam Maharajan
Shefali Singh
D. C. Joshi
Ramwant Gupta
Dinesh Yadav

Frontiers in Genetics

doi 10.3389/fgene.2025.1598523

1,217 views

Original Research

Published on 15 May 2025

Genome-wide identification and expression analysis of the WRKY transcription factors related to sesquiterpenes biosynthesis in Atractylodes lancea

in Genomics of Plants and the Phytoecosystem

Hua Liang
Weiwei Liu
Zhiqiang Zhao
Yaqian Li
Liangping Zha

Frontiers in Genetics

doi 10.3389/fgene.2025.1551991

1,045 views

Data Report

Published on 14 May 2025

Complete assembly of the organellar genome of Rubroshorea johorensis utilizing advanced long-read sequencing technologies

in Genomics of Plants and the Phytoecosystem

Aditya Nugroho
Evayusvita Rustam
Nurin Widyani
Fitri Indriani
Dede J. Sudrajat
Mohammad Agus Salim
Muhammad Majiidu
Fifi Gus Dwiyanti
Rahadian Pratama
Iskandar Z. Siregar

Frontiers in Genetics

doi 10.3389/fgene.2025.1574266

1,179 views

Original Research

Published on 14 May 2025

Scaffolded and annotated nuclear and organelle genomes of the North American brown alga Saccharina latissima

in Genomics of Plants and the Phytoecosystem

Kelly DeWeese
Gary Molano
Sara Calhoun
Anna Lipzen
Jerry Jenkins
Melissa Williams
Christopher Plott
Jayson Talag
Jane Grimwood
Jean-Luc Jannink

Frontiers in Genetics

doi 10.3389/fgene.2025.1494480

1,269 views

Original Research

Published on 08 May 2025

Genetic dissection of yield and yield-related traits in mungbean based on QTL meta-analysis

in Genomics of Plants and the Phytoecosystem

Binbin Du
Qifei Wang
Song Gao
Fan Yang
Lei Zhang
Xiao Zhang
Dongao Huo
Jia Wu
Xingen Zhang
Fang Li

Frontiers in Genetics

doi 10.3389/fgene.2025.1600979

1,169 views