Frontiers in Genetics | Genomics of Plants and the Phytoecosystem

Review

Published on 19 Apr 2024

Advances in genomics and genome editing for improving strawberry (Fragaria ×ananassa)

in Genomics of Plants and the Phytoecosystem

Kaitlyn Vondracek
Fredy Altpeter
Tie Liu
Seonghee Lee

Frontiers in Genetics

doi 10.3389/fgene.2024.1382445

12,342 views
11 citations

Original Research

Published on 16 Apr 2024

Comparative genomics analysis of pheophorbide a oxygenase (PAO) genes in eight pyrus genomes and their regulatory role in multiple stress responses in Chinese pear (Pyrus bretschneideri)

in Genomics of Plants and the Phytoecosystem

Yuchen Ma
Jiao Sun
Xiao Zhang
Muhammad Sadaqat
Muhammad Tahir Ul Qamar
Tingting Liu

Frontiers in Genetics

doi 10.3389/fgene.2024.1396744

2,875 views
4 citations

Mini Review

Published on 16 Apr 2024

CRF transcription factors in the trade-off between abiotic stress response and plant developmental processes

in Genomics of Plants and the Phytoecosystem

Davide Gentile
Giovanna Serino
Giovanna Frugis

Frontiers in Genetics

doi 10.3389/fgene.2024.1377204

3,402 views
8 citations

Original Research

Published on 12 Apr 2024

Characterization of FBA genes in potato (Solanum tuberosum L.) and expression patterns in response to light spectrum and abiotic stress

in Genomics of Plants and the Phytoecosystem

Ting Li
Xinyue Hou
Zhanglun Sun
Bin Ma
Xingxing Wu
Tingting Feng
Hao Ai
Xianzhong Huang
Ruining Li

Frontiers in Genetics

doi 10.3389/fgene.2024.1364944

2,788 views
7 citations

Original Research

Published on 10 Apr 2024

Combined metabolome and transcriptome analyses reveal that growing under Red shade affects secondary metabolite content in Huangjinya green tea

in Genomics of Plants and the Phytoecosystem

Zaifa Shu
Qingyong Ji
Tianjun He
Dayun Zhou
Shenghong Zheng
Huijuan Zhou
Weizhong He

Frontiers in Genetics

doi 10.3389/fgene.2024.1365243

2,927 views
4 citations

Hypothesis and Theory

Published on 09 Apr 2024

The influence of the pollination compatibility type on the pistil S-RNase expression in European pear (Pyrus communis)

in Genomics of Plants and the Phytoecosystem

Hanne Claessen
Han Palmers
Wannes Keulemans
Bram Van de Poel
Nico De Storme

Frontiers in Genetics

doi 10.3389/fgene.2024.1360332

2,203 views

Original Research

Published on 08 Apr 2024

Expression profiling of ALOG family genes during inflorescence development and abiotic stress responses in rice (Oryza sativa L.)

in Genomics of Plants and the Phytoecosystem

Zhiyuan Liu
Zhenjiang Fan
Lei Wang
Siyue Zhang
Weichen Xu
Sijie Zhao
Sijia Fang
Mei Liu
Sackitey Mark Kofi
Shuangxi Zhang

Frontiers in Genetics

doi 10.3389/fgene.2024.1381690

2,553 views
4 citations

Original Research

Published on 02 Apr 2024

Chloroplast genomes in seven Lagerstroemia species provide new insights into molecular evolution of photosynthesis genes

in Genomics of Plants and the Phytoecosystem

Ling He
Sujuan Xu
Xinnian Cheng
Hanlin Huang
Hongyu Dai
Xin Wang
Zhiyang Ding
Ming Xu
Haoran Gu
Na Yan

Frontiers in Genetics

doi 10.3389/fgene.2024.1378403

2,499 views
1 citation

Original Research

Published on 26 Mar 2024

Comparison of ddRADseq and EUChip60K SNP genotyping systems for population genetics and genomic selection in Eucalyptus dunnii (Maiden)

in Genomics of Plants and the Phytoecosystem

Natalia Cristina Aguirre
Pamela Victoria Villalba
Martín Nahuel García
Carla Valeria Filippi
Juan Gabriel Rivas
María Carolina Martínez
Cintia Vanesa Acuña
Augusto J. López
Juan Adolfo López
Pablo Pathauer

Frontiers in Genetics

doi 10.3389/fgene.2024.1361418

5,629 views
3 citations

Retraction

Published on 19 Mar 2024

Retraction: Corrigendum: Cytokinin and abiotic stress tolerance-what has been accomplished and the way forward?

in Genomics of Plants and the Phytoecosystem

Frontiers Editorial Office

Frontiers in Genetics

doi 10.3389/fgene.2024.1399266

2,667 views

Retraction

Published on 19 Mar 2024

Retraction: Cytokinin and abiotic stress tolerance -what has been accomplished and the way forward?

in Genomics of Plants and the Phytoecosystem

Frontiers Editorial Office

Frontiers in Genetics

doi 10.3389/fgene.2024.1399259

2,818 views

Editorial

Published on 13 Mar 2024

Editorial: Enriching genomic breeding with environmental covariates, crop models, and high-throughput phenotyping

in Genomics of Plants and the Phytoecosystem

Alencar Xavier
Katy M. Rainey
Kelly R. Robbins

Frontiers in Genetics

doi 10.3389/fgene.2024.1391938

2,799 views

Original Research

Published on 08 Mar 2024

Dual-transgenic BiFC vector systems for protein-protein interaction analysis in plants

in Genomics of Plants and the Phytoecosystem

Piaojuan Chen
Meiling Ye
Yadi Chen
Qin Wang
Qiongli Wang
Ming Zhong

Frontiers in Genetics

doi 10.3389/fgene.2024.1355568

6,213 views
2 citations

Original Research

Published on 06 Mar 2024

Comparative stigmatic transcriptomics reveals self and cross pollination responses to heteromorphic incompatibility in Plumbago auriculata Lam.

in Genomics of Plants and the Phytoecosystem

Di Hu
Di Lin
Shouli Yi
Suping Gao
Ting Lei
Wenji Li
Tingdan Xu

Frontiers in Genetics

doi 10.3389/fgene.2024.1372644

2,475 views
2 citations

Editorial

Published on 05 Mar 2024

Editorial: Molecular and breeding mechanisms for enhanced performance in underutilized leguminous crops in Africa

in Genomics of Plants and the Phytoecosystem

Lydia N. Horn
M. T. Labuschagne

Frontiers in Genetics

doi 10.3389/fgene.2024.1385989

1,611 views

Original Research

Published on 26 Feb 2024

Comparative genomics and bioinformatics approaches revealed the role of CC-NBS-LRR genes under multiple stresses in passion fruit

in Genomics of Plants and the Phytoecosystem

Komal Zia
Muhammad Sadaqat
Baopeng Ding
Kinza Fatima
Norah A. Albekairi
Abdulrahman Alshammari
Muhammad Tahir ul Qamar

Frontiers in Genetics

doi 10.3389/fgene.2024.1358134

4,361 views
6 citations

Original Research

Published on 23 Feb 2024

Comparative transcriptome and metabolome profiles of the leaf and fruits of a Xianjinfeng litchi budding mutant and its mother plant

in Genomics of Plants and the Phytoecosystem

Ning Xu
Xian-quan Qin
Dong-bo Li
Yan-jie Hou
Chen Fang
Shu-wei Zhang
Jing-yi You
Hong-Li Li
Hong-ye Qiu

Frontiers in Genetics

doi 10.3389/fgene.2024.1360138

3,752 views
1 citation

Original Research

Published on 21 Feb 2024

Linkage mapping and genomic prediction of grain quality traits in tropical maize (Zea mays L.)

in Genomics of Plants and the Phytoecosystem

Noel Ndlovu
Rajashekar M. Kachapur
Yoseph Beyene
Biswanath Das
Veronica Ogugo
Dan Makumbi
Charles Spillane
Peter C. McKeown
Boddupalli M. Prasanna
Manje Gowda

Frontiers in Genetics

doi 10.3389/fgene.2024.1353289

4,445 views
10 citations

Review

Published on 19 Feb 2024

A comprehensive review on Gossypium hirsutum resistance against cotton leaf curl virus

in Genomics of Plants and the Phytoecosystem

Sahar Nadeem
Syed Riaz Ahmed
Tahira Luqman
Daniel K. Y. Tan
Zahra Maryum
Khalid Pervaiz Akhtar
Sana Muhy Ud Din Khan
Muhammad Sayyam Tariq
Nazar Muhammad
Muhammad Kashif Riaz Khan

Frontiers in Genetics

doi 10.3389/fgene.2024.1306469

6,480 views
12 citations

Original Research

Published on 19 Feb 2024

Genomic characterisation and dissection of the onset of resistance to acetyl CoA carboxylase-inhibiting herbicides in a large collection of Digitaria insularis from Brazil

in Genomics of Plants and the Phytoecosystem

Deepmala Sehgal
Claudia Oliveira
Sandra Mathioni
Stephanie Widdison
Will Plumb
Breno Campos
Shiv Shankhar Kaundun

Frontiers in Genetics

doi 10.3389/fgene.2024.1340852

3,086 views
3 citations

Original Research

Published on 16 Feb 2024

Genome-wide identification of U-box gene family and expression analysis in response to saline-alkali stress in foxtail millet (Setaria italica L. Beauv)

in Genomics of Plants and the Phytoecosystem

Xiaoke Zhou
Yun Li
Jian Wang
Yuxue Zhao
Huimin Wang
Yucui Han
Xiaohu Lin

Frontiers in Genetics

doi 10.3389/fgene.2024.1356807

3,519 views
4 citations

Original Research

Published on 06 Feb 2024

Genome-wide association and genomic prediction for iron and zinc concentration and iron bioavailability in a collection of yellow dry beans

in Genomics of Plants and the Phytoecosystem

Paulo Izquierdo
Rie Sadohara
Jason Wiesinger
Raymond Glahn
Carlos Urrea
Karen Cichy

Frontiers in Genetics

doi 10.3389/fgene.2024.1330361

3,276 views
6 citations

Original Research

Published on 02 Feb 2024

Development of early maturing salt-tolerant rice variety KKL(R) 3 using a combination of conventional and molecular breeding approaches

in Genomics of Plants and the Phytoecosystem

Thirumeni Saminadane
Sathyadevi Geddam
Paramasivam Krishnaswamy
Karthick Jothiganapathy
Anandhan Tamilselvan
Bharathi Raja Ramadoss
Patil Sri Hari Reddy
Uma Shankar Singh
Rakesh Kumar Singh
John Damien Platten

Frontiers in Genetics

doi 10.3389/fgene.2023.1332691

8,183 views
8 citations

Original Research

Published on 02 Feb 2024

Mining of disease-resistance genes in Crocus sativus based on transcriptome sequencing

in Genomics of Plants and the Phytoecosystem

Dongdong Ye
Siwei Zhang
Xiankui Gao
Xiujuan Li
Xin Jin
Min Shi
Guoyin Kai
Wei Zhou

Frontiers in Genetics

doi 10.3389/fgene.2024.1349626

3,350 views
3 citations

903 articles

articles

Advances in genomics and genome editing for improving strawberry (Fragaria ×ananassa)

Comparative genomics analysis of pheophorbide a oxygenase (PAO) genes in eight pyrus genomes and their regulatory role in multiple stress responses in Chinese pear (Pyrus bretschneideri)

CRF transcription factors in the trade-off between abiotic stress response and plant developmental processes

Characterization of FBA genes in potato (Solanum tuberosum L.) and expression patterns in response to light spectrum and abiotic stress

Combined metabolome and transcriptome analyses reveal that growing under Red shade affects secondary metabolite content in Huangjinya green tea

The influence of the pollination compatibility type on the pistil S-RNase expression in European pear (Pyrus communis)

Expression profiling of ALOG family genes during inflorescence development and abiotic stress responses in rice (Oryza sativa L.)

Chloroplast genomes in seven Lagerstroemia species provide new insights into molecular evolution of photosynthesis genes

Comparison of ddRADseq and EUChip60K SNP genotyping systems for population genetics and genomic selection in Eucalyptus dunnii (Maiden)

Retraction: Corrigendum: Cytokinin and abiotic stress tolerance-what has been accomplished and the way forward?

Retraction: Cytokinin and abiotic stress tolerance -what has been accomplished and the way forward?

Editorial: Enriching genomic breeding with environmental covariates, crop models, and high-throughput phenotyping

Dual-transgenic BiFC vector systems for protein-protein interaction analysis in plants

Comparative stigmatic transcriptomics reveals self and cross pollination responses to heteromorphic incompatibility in Plumbago auriculata Lam.

Editorial: Molecular and breeding mechanisms for enhanced performance in underutilized leguminous crops in Africa

Comparative genomics and bioinformatics approaches revealed the role of CC-NBS-LRR genes under multiple stresses in passion fruit

Comparative transcriptome and metabolome profiles of the leaf and fruits of a Xianjinfeng litchi budding mutant and its mother plant

Linkage mapping and genomic prediction of grain quality traits in tropical maize (Zea mays L.)

A comprehensive review on Gossypium hirsutum resistance against cotton leaf curl virus

Genomic characterisation and dissection of the onset of resistance to acetyl CoA carboxylase-inhibiting herbicides in a large collection of Digitaria insularis from Brazil

Genome-wide identification of U-box gene family and expression analysis in response to saline-alkali stress in foxtail millet (Setaria italica L. Beauv)

Genome-wide association and genomic prediction for iron and zinc concentration and iron bioavailability in a collection of yellow dry beans

Development of early maturing salt-tolerant rice variety KKL(R) 3 using a combination of conventional and molecular breeding approaches

Mining of disease-resistance genes in Crocus sativus based on transcriptome sequencing