Frontiers in Genetics

Original Research

Published on 29 Apr 2025

Chromosome-level draft genome assembly of Hypomesus nipponensis reveals transposable element expansion reshaping the genome structure

Chenzhao Zhu
Youyi Kuang
Zhe Li
Fujiang Tang

Frontiers in Genetics

doi 10.3389/fgene.2025.1502681

2,343 views

Original Research

Published on 29 Apr 2025

Artificial intelligence meets genomic selection: comparing deep learning and GBLUP across diverse plant datasets

Abelardo Montesinos-López
Osval A. Montesinos-López
Sofia Ramos-Pulido
Brandon Alejandro Mosqueda-González
Edgar Alejandro Guerrero-Arroyo
José Crossa
Rodomiro Ortiz

Frontiers in Genetics

doi 10.3389/fgene.2025.1568705

6,245 views
9 citations

Original Research

Published on 29 Apr 2025

Constructing ancestral recombination graphs through reinforcement learning

Mélanie Raymond
Marie-Hélène Descary
Cédric Beaulac
Fabrice Larribe

Frontiers in Genetics

doi 10.3389/fgene.2025.1569358

2,621 views

Original Research

Published on 29 Apr 2025

Potential common mechanisms between primary Sjögren’s syndrome and Hashimoto’s thyroiditis: a public databases-based study

Yanjun Lin
Shupin Tang
Yan Lin
Rihui Wang
Yifeng Xing
Zonghe Xu
Yan Li
Qingxia Fang
Wenwei Wei
Dong Wu

Frontiers in Genetics

doi 10.3389/fgene.2025.1520332

3,438 views
1 citation

Original Research

Published on 29 Apr 2025

The identification of a blood circular RNA signature that differentiates Chikungunya virus infection

Xue Bai
Hanlin Yan
Guoxia Wen
Shaoxun Yuan
Wanjun Gu

Frontiers in Genetics

doi 10.3389/fgene.2025.1602177

2,718 views

Mini Review

Published on 28 Apr 2025

Frontier progress and translational challenges of pluripotent differentiation of stem cells

Zhengbing Su
Hui Dong
Xiang Fang
Wenli Zhang
Hong Duan

Frontiers in Genetics

doi 10.3389/fgene.2025.1583391

5,698 views
6 citations

Original Research

Published on 28 Apr 2025

Skin transcriptomic and selection signature analyses identify ASIP as a key gene in cattle coat color determination

Xin Wang
Longxin Xu
Di Zhou
Yanli Lv
Junda Wu
Yuanfeng Zhao
Mengmeng Ni
Wenzhang Zhou
Kaikai Zhang
Hua Wang

Frontiers in Genetics

doi 10.3389/fgene.2025.1577647

2,707 views
2 citations

Original Research

Published on 28 Apr 2025

Shared genetic features inference among hypoxia-ischemia diseases in the presence of heterogenous omics data based on a novel risk assessment method

Yifan Zhang
Jianfeng Liu
Zhuoma Basang
Qianxun Yang
Hongce Chen
Shuo Chen
Shaogang Li
Changgui Lei
Mingyan Fang
Huanhuan Liu

Frontiers in Genetics

doi 10.3389/fgene.2025.1587854

4,297 views
2 citations

Original Research

Published on 28 Apr 2025

Single-cell transcriptomic construction of fibroblast score for analysis of immune infiltration in primary and metastatic ovarian cancer

Qian Guo
Hongmei Ding
Qinlin Zheng

Frontiers in Genetics

doi 10.3389/fgene.2025.1549541

2,261 views

Original Research

Published on 28 Apr 2025

Integrative analysis of DNA methylation, RNA sequencing, and genomic variants in the cancer genome atlas (TCGA) to predict endometrial cancer recurrence

Jin Hwa Hong
Yung Taek Ouh
Sohyeon Jeong
Yoonji Oh
Hyun Woong Cho
Jae Kwan Lee
Hayeon Kim
Chungyeul Kim
Sanghyun Roh
Eun Na Kim

Frontiers in Genetics

doi 10.3389/fgene.2025.1569122

4,467 views
3 citations

Original Research

Published on 28 Apr 2025

Exploring WNT pathway dysregulation in serrated colorectal cancer for improved diagnostic and therapeutic strategies

Fengzhi Zhu
Helen Hoi Ning Yan
Yin Tong
Yueliang Zhao

Frontiers in Genetics

doi 10.3389/fgene.2025.1586867

2,452 views
1 citation

Original Research

Published on 25 Apr 2025

Genetic diversity and novel haplotypes of Apis mellifera jemenitica on the Arabian Peninsula: insights from mtDNA markers

Mohammed Alsharhi
Ahmad Al-Ghamdi
Maged Ahmed Al-Garadi
Mohamed Alburaki

Frontiers in Genetics

doi 10.3389/fgene.2025.1532988

2,454 views
1 citation

Original Research

Published on 25 Apr 2025

A rare germline mutation reverses the suppressive effect of GPC5 thereby promoting lung adenocarcinoma development and tumorigenesis

Zhifa Zheng
Lina Zhao
Sen Zhao
Zhihong Wu
Nan Wu

Frontiers in Genetics

doi 10.3389/fgene.2025.1582504

2,577 views

Original Research

Published on 25 Apr 2025

Relationship of VDR and VDBP gene polymorphisms with sepsis susceptibility and prognosis

Chan Lian
Kangtai Ying
Haiyan Shao
Haiting Gu
Wenwei Mao

Frontiers in Genetics

doi 10.3389/fgene.2025.1590750

1,864 views

Original Research

Published on 25 Apr 2025

Correlation of tumor necrosis factor-α and interleukin-1 single-nucleotide polymorphisms with the risk of migraine development

Guijiao Huang
Xin Dong
Xiaojiao Shao
Mengping Wu
Shan Gao
Yixuan Wang
Xinying Guan

Frontiers in Genetics

doi 10.3389/fgene.2025.1556498

1,895 views
2 citations

Case Report

Published on 25 Apr 2025

Prenatal diagnosis of a compound heterozygous variation in the FBXL4 gene by trio-WES and imaging monitoring: a case report

Yujia Zhai
Jing Chen
Shuo Yang
He Wang
Yuanyuan Xiao
Shanling Liu

Frontiers in Genetics

doi 10.3389/fgene.2025.1539288

2,144 views

Perspective

Published on 25 Apr 2025

Emerging and evolving values in the changing landscape of genomics

Maria Siermann
Riya Mohan
Eline M. Bunnik
Anne Cambon-Thomsen
Ruth Chadwick
Martina C. Cornel
Johannes J. M. van Delden
Yann Joly
Fruzsina Molnár-Gábor
Maria Pilar Nicolás Jiménez

Frontiers in Genetics

doi 10.3389/fgene.2025.1566291

4,129 views
3 citations

Original Research

Published on 25 Apr 2025

Fetal karyotyping in adolescent pregnancies: a population-based cohort study on outcomes of invasive prenatal testing

Jakub Staniczek
Maisa Manasar-Dyrbuś
Patrycja Sodowska
Krzysztof Sodowski
Agata Włoch
Bartosz Czuba
Wojciech Cnota
Monika Paul-Samojedny
Agnieszka Kania
Henryka Sodowska

Frontiers in Genetics

doi 10.3389/fgene.2025.1581249

2,604 views

Review

Published on 25 Apr 2025

Mitochondrial microRNAs (mitomiRs) as emerging biomarkers and therapeutic targets for chronic human diseases

Andrea Méndez-García
Marely Abigail García-Mendoza
Carmila Patricia Zárate-Peralta
Fernanda Valeria Flores-Perez
Luis Fernando Carmona-Ramirez
Surajit Pathak
Antara Banerjee
Asim K. Duttaroy
Sujay Paul

Frontiers in Genetics

doi 10.3389/fgene.2025.1555563

5,962 views
5 citations

Original Research

Published on 24 Apr 2025

Key gene screening and diagnostic model establishment for acute type a aortic dissection

Yue Pan
Zhiming Yu
Xiaoyu Qian
Xuesong Zhang
Qun Xue
Weizhang Xiao

Frontiers in Genetics

doi 10.3389/fgene.2025.1586880

3,624 views

Original Research

Published on 24 Apr 2025

Genomic and health characteristics of crossbred dairy cattle in central Uganda

Enrique Sanchez-Molano
Robert Mukiibi
Valentina Riggio
Joel Ogwang
Leonard Kawule
Katali Benda
Peter Beine
Barend M. de Clare Bronsvoort
James Prendergast
Andrea B. Doeschl-Wilson

Frontiers in Genetics

doi 10.3389/fgene.2025.1567910

2,381 views
1 citation

Original Research

Published on 24 Apr 2025

Integration of bulk RNA-seq and scRNA-seq reveals transcriptomic signatures associated with deep vein thrombosis

Bao-ze Pan
Ming-jun Jiang
Li-ming Deng
Jie Chen
Xian-peng Dai
Zi-xuan Wu
Zhi-he Deng
Dong-yang Luo
Yang-yi-jing Wang
Dan Ning

Frontiers in Genetics

doi 10.3389/fgene.2025.1551879

4,278 views
1 citation

Methods

Published on 24 Apr 2025

MSI expresso: a software for determining MSI status and detecting MSI-related transcription events from RNA sequencing data

Emmanuel Tubacher
Alexandre How-Kit
Mourad Sahbatou
Alex Duval
Victor Renault
Jean-François Deleuze

Frontiers in Genetics

doi 10.3389/fgene.2025.1523278

3,070 views

Original Research

Published on 24 Apr 2025

Genetic estimates and genome-wide association studies of antibody response in Tanzanian dairy cattle

Luis E. Hernandez-Castro
Elizabeth Anne Jessie Cook
Oswald Matika
Isaac Joseph Mengele
Shabani Kiyabo Motto
Shedrack Festo Bwatota
Bibiana Zirra-Shallangwa
Ricardo Pong-Wong
James Prendergast
Raphael Mrode

Frontiers in Genetics

doi 10.3389/fgene.2025.1497355

2,953 views

16,571 Publications

volumes

Volume 16 - 2025

Chromosome-level draft genome assembly of Hypomesus nipponensis reveals transposable element expansion reshaping the genome structure

Artificial intelligence meets genomic selection: comparing deep learning and GBLUP across diverse plant datasets

Constructing ancestral recombination graphs through reinforcement learning

Potential common mechanisms between primary Sjögren’s syndrome and Hashimoto’s thyroiditis: a public databases-based study

The identification of a blood circular RNA signature that differentiates Chikungunya virus infection

Frontier progress and translational challenges of pluripotent differentiation of stem cells

Skin transcriptomic and selection signature analyses identify ASIP as a key gene in cattle coat color determination

Shared genetic features inference among hypoxia-ischemia diseases in the presence of heterogenous omics data based on a novel risk assessment method

Single-cell transcriptomic construction of fibroblast score for analysis of immune infiltration in primary and metastatic ovarian cancer

Integrative analysis of DNA methylation, RNA sequencing, and genomic variants in the cancer genome atlas (TCGA) to predict endometrial cancer recurrence

Exploring WNT pathway dysregulation in serrated colorectal cancer for improved diagnostic and therapeutic strategies

Genetic diversity and novel haplotypes of Apis mellifera jemenitica on the Arabian Peninsula: insights from mtDNA markers

A rare germline mutation reverses the suppressive effect of GPC5 thereby promoting lung adenocarcinoma development and tumorigenesis

Relationship of VDR and VDBP gene polymorphisms with sepsis susceptibility and prognosis

Correlation of tumor necrosis factor-α and interleukin-1 single-nucleotide polymorphisms with the risk of migraine development

Prenatal diagnosis of a compound heterozygous variation in the FBXL4 gene by trio-WES and imaging monitoring: a case report

Emerging and evolving values in the changing landscape of genomics

Fetal karyotyping in adolescent pregnancies: a population-based cohort study on outcomes of invasive prenatal testing

Mitochondrial microRNAs (mitomiRs) as emerging biomarkers and therapeutic targets for chronic human diseases

Key gene screening and diagnostic model establishment for acute type a aortic dissection

Genomic and health characteristics of crossbred dairy cattle in central Uganda

Integration of bulk RNA-seq and scRNA-seq reveals transcriptomic signatures associated with deep vein thrombosis

MSI expresso: a software for determining MSI status and detecting MSI-related transcription events from RNA sequencing data

Genetic estimates and genome-wide association studies of antibody response in Tanzanian dairy cattle