Frontiers in Microbiology

Original Research

Published on 27 Jan 2026

Disease-driven restructuring of the gut microbiome underlies inflammatory bowel disease dysbiosis

in Microorganisms in Vertebrate Digestive Systems

Zixu Ding
Ke Ren
Yixue Xu
Tong Feng
Kuiqing Cui
Qingyou Liu
Cun Liao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1744574

1,001 views

Original Research

Published on 27 Jan 2026

Multifaceted antimicrobial mechanisms of NCR147-derived peptides from Medicago truncatula

in Antimicrobials, Resistance and Chemotherapy

Hilda Tiricz
Rui M. Lima
Ilona Pfeiffer
Nóra Igaz
Ildikó Domonkos
Sándor Jenei
Dian H. O. Howan
Alexandra Pál
Edit Tímár
Éva Hunyadi-Gulyás

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1720738

795 views

Original Research

Published on 27 Jan 2026

Fluoroquinolone resistant Escherichia coli in community: molecular analyses of resistance genes, virulence factors, and antimicrobial susceptibility test

in Antimicrobials, Resistance and Chemotherapy

Zuleica Naomi Tano
João Gabriel Soncini
Vanessa Lumi Koga
Julia Silva Pimenta
Pedro Olimpio Siqueira Castilho
Maria Julia Onça Moreira
Alanis Cassamassimo Cardoso
Larissa Sugiura
Renata Katsuko Takayama Kobayashi
Nilton Lincopan

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1730332

812 views

Review

Published on 27 Jan 2026

Microbial dysbiosis in cholangiocarcinoma

in Microorganisms in Vertebrate Digestive Systems

Yunjia Liu
Shaohui Huang
Yang Zhang
Yuankun Zhang
Yunfei Xu
Yongchang Tang
Sen Guo
Zongli Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1727736

502 views

Editorial

Published on 27 Jan 2026

Editorial: Diagnostic innovations for microbial pathogens in edible plants: cutting-edge technologies for enhanced detection

in Microbe and Virus Interactions with Plants

Ravinder Kumar
Anirban Roy
Ying Zhai

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1777845

736 views

Original Research

Published on 27 Jan 2026

Effect of replacing concentrate diet with oat brewery waste on enteric methane emissions, nutrients intake, digestibility and compositional and functional abundances of rumen microbiota in growing male sheep

in Microorganisms in Vertebrate Digestive Systems

Vedant Jayeshkumar Prajapati
Archit Mohapatra
Shraddha Trivedi
Pradeep Kumar Malik
Atul Purushottam Kolte
Umaya R. Suganthi
Tsuma Victor
Elena Ahasic
Artabandhu Sahoo
Raghavendra Bhatta

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1646477

667 views

Original Research

Published on 27 Jan 2026

Neutrophil CD64 index for rapid diagnosis of Pneumocystis jirovecii pneumonia in malignancy patients requiring mechanical ventilation: a retrospective analysis

in Infectious Agents and Disease

Xiaoming Li
Hongyu Yi
Guixin Wu
Aiting He
Rui Li
Yi Long
Changhai Lin
Zhengying Jiang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1706786

518 views

Review

Published on 27 Jan 2026

Advances in microbial sulfoquinovose catabolism

in Microbial Physiology and Metabolism

Yiwei Chen
Dazhi Liu
Ruoxing Chu
Zongyuan Li
Yueya Zhang
Kailiang Ma
Li Jiang
Qiaoyu Yang
Fengxia Lu
Yan Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1758990

644 views

Original Research

Published on 27 Jan 2026

Comprehensive analysis of the mitochondrial genome in lichen genus Xanthoparmelia: genetic diversity, intron dynamics, and evolutionary dynamics

in Microbial Symbioses

Jinsiguli Bahenuer
Anwar Tumur

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1740728

756 views

Review

Published on 27 Jan 2026

From microbiome collapse to recovery: a roadmap for microbiome-informed grassland restoration under global change

in Terrestrial Microbiology

Xu Qiao
Xu Yan
Cui Dong
Lin Tao
Aishajiang Aili
Abdul Waheed

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1741287

860 views

Original Research

Published on 27 Jan 2026

Soil microbial communities in contrasting environments show a common core of species linked to Maytenus senegalensis shrubs

in Terrestrial Microbiology

Elena Díaz-Santiago
Thiaba D. Sadio
Joseph S. Diéme
Miguel Hurtado-Martínez
Christian Kindler
Esteban Manrique
Francisco I. Pugnaire

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1699694

842 views

Original Research

Published on 27 Jan 2026

A retrospective study on the prevalence and genetic characteristics of porcine parvovirus 6 in Guangxi, China

in Infectious Agents and Disease

Liang Cao
Chenxi Ji
Ziping Yu
Wei Wang
Lulu Kang
Lin Jin
Zaiyong Han
Fulong Nan
Wenjie Li
Jialiang Xin

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1754811

631 views

Mini Review

Published on 27 Jan 2026

Gut dysbiosis in neurodevelopmental disorders: linking microbiota signatures to cognitive rigidity in autism spectrum disorder

in Microorganisms in Vertebrate Digestive Systems

Bhagavathi Sundaram Sivamaruthi
Periyanaina Kesika
Chaiyavat Chaiyasut
Durairaj Ragu Varman

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1760635

755 views

Original Research

Published on 27 Jan 2026

Tailored phage cocktail with resistance management for controlling Dickeya solani in potatoes

in Phage Biology

Miloud Sabri
Khaoula Mektoubi
Khaoula Habbadi
Orges Cara
Kaoutar El Handi
Angelo De Stradis
Toufic Elbeaino

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1748314

881 views

Original Research

Published on 27 Jan 2026

Microbiome changes in the sponge Halichondria panicea along the Baltic Sea salinity gradient

in Aquatic Microbiology

Philipp Hoy
Christiane Hassenrück
Felix Mittermayer-Schmittmann
Lara Schmittmann
Klaus Jürgens

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1723082

426 views

Original Research

Published on 27 Jan 2026

Broad-spectrum inhibition of SARS-CoV-2 variants by dibutyl phthalate through allosteric disruption of Spike-ACE2 interface

in Virology

Jiafan Chen
Dekuan Guo
Xiaoxuan Guo
Lijun Zhao
Geng Li
Helu Liu
Shaobo Wang
Zizhao Lao
Meiling Zhu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1610775

725 views

Original Research

Accepted on 26 Jan 2026

Taxonomic landscape of the Mycobacterium "Fortuitum-Vaccae" clade: a genome study

in Infectious Agents and Disease

Zhiyong Zong
Chengcheng Wang
Yu Feng
Dan Zhou
Feifei Zhao
Yuling Xiao
Yi Xie
Alan Mcnally

Frontiers in Microbiology

287 views

Review

Accepted on 26 Jan 2026

Can microalgae grow on dissolved black carbon generated from high-frequency wildfires?

in Microbiotechnology

Shah Faisal
Ahmad Mustafa
Mahdy Elsayed
Shangze Zhang
Xuyang Qiao
Irfan Saif
Javed Muhammad
Ting Li
Jialing Tang
Cassamo Ussemane Mussagy

Frontiers in Microbiology

161 views

Original Research

Accepted on 26 Jan 2026

Dissemination of a blaNDM-1-harboring IncH plasmid associated with concurrent ST30 Klebsiella pneumoniae and ST2 Klebsiella oxytoca outbreaks in a Chinese neonatal unit

in Antimicrobials, Resistance and Chemotherapy

Dandan Dong
Zhenzhen Liu
Nan Jia
Yanfei Liu
Hui Zhao
Yuanqi Zhu

Frontiers in Microbiology

125 views

Original Research

Accepted on 26 Jan 2026

Antibiotic Resistance Characteristics, Molecular Typing, and Potential Transmission Reservoirs of Methicillin-resistant Staphylococcus aureus in Patients with Postoperative Infection

in Antimicrobials, Resistance and Chemotherapy

Nan Cao
Ming-Xin Li
Ming-Yan Zhu
Yu Wang
Bing Wan
Jia Xu

Frontiers in Microbiology

155 views

Original Research

Accepted on 26 Jan 2026

Enzymatic activities of proteins encoded by PmurB, PmurC, and PmurE involved in methanogen pseudomurein biosynthesis

in Biology of Archaea

Guihong Cha
Zhenli Lai
Shuxin Wang
Qing Yang
Pengyan Zhao
Yi Chen
Wei Han
Liping Bai

Frontiers in Microbiology

380 views

Original Research

Accepted on 26 Jan 2026

Fourier Transform Infrared Spectroscopy Enables Rapid Strain Typing and Cluster Analysis of Listeria monocytogenes under Diverse Growth Conditions

in Food Microbiology

Francis Muchaamba
Marc J. A. Stevens
Roger Stephan

Frontiers in Microbiology

146 views

Original Research

Accepted on 26 Jan 2026

First Rreport of a Nnovel Paenibacillus Sstrain JDF1 and Iits Bbiocontrol Ppotential against Ccitrus Bbacterial Ccanker

in Microbe and Virus Interactions with Plants

Ze-Qiong Wang
Yu-Xiong Xiao
Zhu Tong
Xiu-Juan He
Hai-Yue Zhang
Wenming Qiu

Frontiers in Microbiology

123 views

Original Research

Accepted on 26 Jan 2026

Rumen and Cecum Microbial Dynamics Following Narasin Inclusion in Nellore Cattle Diets

in Microorganisms in Vertebrate Digestive Systems

Johnny Souza
Leandro A F Silva
Daniel M Casali
Janaina C S M Souza
Luke A Wolfe
Joseph H Skarlupka
Ibrahim Zuniga-Chaves
Andrew Steinberger
Courtney L Deblois
Andrew J Scheftgen

Frontiers in Microbiology

124 views

39,342 articles

articles

Disease-driven restructuring of the gut microbiome underlies inflammatory bowel disease dysbiosis

Multifaceted antimicrobial mechanisms of NCR147-derived peptides from Medicago truncatula

Fluoroquinolone resistant Escherichia coli in community: molecular analyses of resistance genes, virulence factors, and antimicrobial susceptibility test

Microbial dysbiosis in cholangiocarcinoma

Editorial: Diagnostic innovations for microbial pathogens in edible plants: cutting-edge technologies for enhanced detection

Effect of replacing concentrate diet with oat brewery waste on enteric methane emissions, nutrients intake, digestibility and compositional and functional abundances of rumen microbiota in growing male sheep

Neutrophil CD64 index for rapid diagnosis of Pneumocystis jirovecii pneumonia in malignancy patients requiring mechanical ventilation: a retrospective analysis

Advances in microbial sulfoquinovose catabolism

Comprehensive analysis of the mitochondrial genome in lichen genus Xanthoparmelia: genetic diversity, intron dynamics, and evolutionary dynamics

From microbiome collapse to recovery: a roadmap for microbiome-informed grassland restoration under global change

Soil microbial communities in contrasting environments show a common core of species linked to Maytenus senegalensis shrubs

A retrospective study on the prevalence and genetic characteristics of porcine parvovirus 6 in Guangxi, China

Gut dysbiosis in neurodevelopmental disorders: linking microbiota signatures to cognitive rigidity in autism spectrum disorder

Tailored phage cocktail with resistance management for controlling Dickeya solani in potatoes

Microbiome changes in the sponge Halichondria panicea along the Baltic Sea salinity gradient

Broad-spectrum inhibition of SARS-CoV-2 variants by dibutyl phthalate through allosteric disruption of Spike-ACE2 interface

Taxonomic landscape of the Mycobacterium "Fortuitum-Vaccae" clade: a genome study

Can microalgae grow on dissolved black carbon generated from high-frequency wildfires?

Dissemination of a blaNDM-1-harboring IncH plasmid associated with concurrent ST30 Klebsiella pneumoniae and ST2 Klebsiella oxytoca outbreaks in a Chinese neonatal unit

Antibiotic Resistance Characteristics, Molecular Typing, and Potential Transmission Reservoirs of Methicillin-resistant Staphylococcus aureus in Patients with Postoperative Infection

Enzymatic activities of proteins encoded by PmurB, PmurC, and PmurE involved in methanogen pseudomurein biosynthesis

Fourier Transform Infrared Spectroscopy Enables Rapid Strain Typing and Cluster Analysis of Listeria monocytogenes under Diverse Growth Conditions

First Rreport of a Nnovel Paenibacillus Sstrain JDF1 and Iits Bbiocontrol Ppotential against Ccitrus Bbacterial Ccanker

Rumen and Cecum Microbial Dynamics Following Narasin Inclusion in Nellore Cattle Diets