Frontiers in Microbiology

Original Research

Published on 22 Jan 2026

Mosquito viromes across England and Wales reveal hidden arbovirus signals and limited ecological structuring

in Virology

Jack Pilgrim
Emma Widlake
Roksana Wilson
Alexander G. C. Vaux
Jolyon M. Medlock
Alistair C. Darby
Matthew Baylis
Marcus S. C. Blagrove

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1749228

844 views

Original Research

Published on 22 Jan 2026

Shotgun metagenomics reveals the prevalence and mobility of antibiotic resistance genes in the West Bay of the human-impacted Laguna Lake

in Antimicrobials, Resistance and Chemotherapy

Lance Matthew F. Farinas
Laurice Beatrice Raphaelle O. dela Peña
Windell L. Rivera

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1742578

819 views

Original Research

Published on 22 Jan 2026

Evaluation of the inhibitory effect of the cell-free fermentation filtrate of Bacillus atrophaeus YL84 on Fusarium oxysporum f. sp. vasinfectum and analysis of its metabolic products

in Microbe and Virus Interactions with Plants

Yuxin Tang
Zhe Wang
Hongzu Feng
Lan Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1761389

465 views

Original Research

Published on 22 Jan 2026

Application of juniper (Juniperus communis) essential oil nanoemulsions to control spoilage and pathogenic bacteria in fish

in Food Microbiology

Hakan Çolak
Mustafa Durmuş
Esmeray Küley
Ali Rıza Köşker
Yetkin Sakarya
Tuba Esatbeyoglu
Fatih Özogul

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1758540

655 views

Original Research

Published on 22 Jan 2026

Sucrose supplementation influences gut microbial diversity and functional shifts in Apis cerana indica

in Microbial Symbioses

Deeptismita Nayak
Pravasini Behera
Satyapriya Singh
Partha Sarathi Tripathy
Soumya Shephalika Dash
Madhumita Dasgupta
Sansuta Mohanty
Manas Ranjan Sahoo
Chitta Ranjan Satapathy
Arundhati Sasmal

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1733283

1,069 views

Original Research

Published on 22 Jan 2026

Associations between volatile fatty acid profiles, methane emissions, and rumen microbiota in sheep fed Ethiopian forage

in Microorganisms in Vertebrate Digestive Systems

Wondimagegne Bekele
Lovely Mahawar
Mohammad Ramin
Addis Simachew
Benedicte Riber Albrectsen
Abiy Zegeye

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1731623

652 views

Original Research

Published on 22 Jan 2026

Polymorphospora lycopeni A560, a new strain capable of producing lycopene, and its optimal fermentation and extraction conditions

in Food Microbiology

Xiaomin Duan
Shilong Li
Yan Li
Zihao Yang
Xiumin Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1723758

543 views

Original Research

Published on 22 Jan 2026

Integrated multi-omics analysis reveals rumen and rectal microbiota–metabolite interaction features in polytocous fine-wool sheep with divergent residual feed intake

in Microorganisms in Vertebrate Digestive Systems

Menghua Kong
Zhangyuan Pan
Xu Wang
Juncheng Huang
Hanikezi Tulafu
Yue Xu
Yiming Sulaiman
Weiwei Wu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1712307

723 views

Original Research

Published on 22 Jan 2026

GlnR positively affects the acid resistance of Lactiplantibacillus plantarum from wine by regulating glutamate metabolism

in Microbial Physiology and Metabolism

Ke Lu
Kan Shi
Yuxin Yuan
Yuanyuan Liu
Chuangyi Miao
Tao Pan
Pengfei Duan
Jangyong Wang
Shuwen Liu
Lili Zhao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1757806

580 views

Original Research

Published on 22 Jan 2026

Parents-child multiple sites of microbial and metabolic signatures in autism spectrum disorder

in Microorganisms in Vertebrate Digestive Systems

Lingping Zhu
Haiyan Zhang
Meiling Tang
Xuefeng Yang
Yongjun Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1745874

660 views

Correction

Published on 22 Jan 2026

Correction: Peppermint extract improves egg production and quality, increases antioxidant capacity, and alters cecal microbiota in late-phase laying hens

in Microorganisms in Vertebrate Digestive Systems

Miaomiao Bai
Hongnan Liu
Yihui Zhang
Shanshan Wang
Yirui Shao
Xia Xiong
Xin Hu
Rongyao Yu
Wei Lan
Yadong Cui

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1746506

549 views

Original Research

Published on 22 Jan 2026

Single-cell RNA-seq reveals a key role for Vibrio cholerae Mak toxins in Tetrahymena pyriformis killing and bacterial survival

in Aquatic Microbiology

Jonah M. Moon
M. Mozammel Hoque
Dana Ronin
Parisa Noorian
Joyce To
Scott A. Rice
Diane McDougald
Gustavo Espinoza-Vergara

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1729243

1,119 views

Original Research

Accepted on 21 Jan 2026

B-cell peptide epitopes as diagnostic targets for Q fever in sheep

in Infectious Agents and Disease

Tamara Kozytska
Claudia Gerlach
Maksym Danchenko
Gabriela Flores-Ramirez
Hanka Brangsch
Heinrich Neubauer
Martin Pfeffer
Mathias Wilhelm Pletz
Ludovit Skultety
Katja Mertens-Scholz

Frontiers in Microbiology

291 views

Methods

Accepted on 21 Jan 2026

Triplex viability PCR for simultaneous quantification of viable Lactobacillus acidophilus, Streptococcus thermophilus, and Bifidobacterium bifidum in live microbial formulations

in Microbiotechnology

Luca Del Pio
Stefania Catone
Giulio Pisani
Giovanna Franciosa

Frontiers in Microbiology

215 views

Original Research

Accepted on 21 Jan 2026

Tree species diversity promotes soil microbial carbon fixation gene abundance via nutrient-mediated interactions in subtropical forests

in Terrestrial Microbiology

SIWEN SU
Jinwen Pan
Huili Wu
Shuai Ouyang
Liang Chen
Yelin Zeng
Nan Deng

Frontiers in Microbiology

114 views

Original Research

Accepted on 21 Jan 2026

Basecalling-free resistance gene identification using a hybrid transformer in raw nanopore signals

in Antimicrobials, Resistance and Chemotherapy

Roman Jakubicek
Jevhenij Vorochta
Marketa Jakubickova
Matej Bezdicek
Martina Lengerova
Helena Vitkova

Frontiers in Microbiology

345 views

Original Research

Accepted on 21 Jan 2026

Candida serves as a reservoir facilitating associating with facilitating the survival and pathogenesis of Helicobacter pylori

in Infectious Agents and Disease

Jianchao Sun
Tingxiu Yang
Qing Luo
Yan Wang
Wei Zhang
Zhenghong Chen

Frontiers in Microbiology

273 views

Perspective

Accepted on 21 Jan 2026

Stratified Management of Residual Gastric Cancer Risk After H. 1 pylori Eradication

in Infectious Agents and Disease

QiYing Yu
Li Song

Frontiers in Microbiology

283 views

Opinion

Accepted on 21 Jan 2026

Commentary: CRISPR–Cas systems against carbapenem resistance — from proof‑of‑concept to clinical translation

in Antimicrobials, Resistance and Chemotherapy

Vijayasimha, M
Srikanth Mulavagili

Frontiers in Microbiology

160 views

Original Research

Published on 21 Jan 2026

Genome-wide characterization of histone deacetylases in Fusarium proliferatum: phylogeny, structure, and stress responses

in Microbial Physiology and Metabolism

Hong-Mei Shi
Hong-Xin Liao
Jin-Rui Wen
Huan-Qi Cun
Yun-Ju Hong
Zhang-Feng Hu
Fu-Rong Xu
Sulukkana Noiprasert
Kanyaphat Apiwongsrichai
Xiao-Yun Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1692364

907 views

Original Research

Published on 21 Jan 2026

motA-mediated flagellar motility modulates biofilm formation and competitive nodulation in Mesorhizobium ciceri USDA 3378

in Microbial Symbioses

Keyu Chen
Haoran Hao
Kaiwen Zhang
Ke Li
Youguo Li
Mitchell Andrews
Hua Zhang
Zhiqiang Feng
Junjie Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1743961

631 views

Original Research

Published on 21 Jan 2026

Emerging fluconazole-resistant Candida parapsilosis in Australia: a case cluster and insights into the genetic diversity of this species

in Infectious Agents and Disease

Manoshi Perera
Winkie Fong
Rose Haywood
Geraldine J. Sullivan
Qinning Wang
Catriona L. Halliday
Sharn Dowsett-Moeahu
Chayanika Biswas
Carolina Firacative
Marie-Claire Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1742871

552 views

Original Research

Published on 21 Jan 2026

Consensus scoring-guided virtual screening identifies potent anti-saprolegniasis compounds targeting a P450 fusion protein

in Aquatic Microbiology

Muhammad Akhtar Ali
Anum Javaid
Charuvaka Muvva
Natarajan Arul Murugan
Vaibhav Srivastava

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1723326

762 views

Review

Published on 21 Jan 2026

Multidrug-resistant Pseudomonas aeruginosa infections: current status, challenges, and prospects of phage therapy

in Phage Biology

Bo Yan
Can Yan
Yafang Ding
Siyi Cai
Yujin Wang
Elvis Agbo
Xianyun Xu
Kunhao Qin
Qiang Fu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1723885

1,448 views

39,351 articles

articles

Mosquito viromes across England and Wales reveal hidden arbovirus signals and limited ecological structuring

Shotgun metagenomics reveals the prevalence and mobility of antibiotic resistance genes in the West Bay of the human-impacted Laguna Lake

Evaluation of the inhibitory effect of the cell-free fermentation filtrate of Bacillus atrophaeus YL84 on Fusarium oxysporum f. sp. vasinfectum and analysis of its metabolic products

Application of juniper (Juniperus communis) essential oil nanoemulsions to control spoilage and pathogenic bacteria in fish

Sucrose supplementation influences gut microbial diversity and functional shifts in Apis cerana indica

Associations between volatile fatty acid profiles, methane emissions, and rumen microbiota in sheep fed Ethiopian forage

Polymorphospora lycopeni A560, a new strain capable of producing lycopene, and its optimal fermentation and extraction conditions

Integrated multi-omics analysis reveals rumen and rectal microbiota–metabolite interaction features in polytocous fine-wool sheep with divergent residual feed intake

GlnR positively affects the acid resistance of Lactiplantibacillus plantarum from wine by regulating glutamate metabolism

Parents-child multiple sites of microbial and metabolic signatures in autism spectrum disorder

Correction: Peppermint extract improves egg production and quality, increases antioxidant capacity, and alters cecal microbiota in late-phase laying hens

Single-cell RNA-seq reveals a key role for Vibrio cholerae Mak toxins in Tetrahymena pyriformis killing and bacterial survival

B-cell peptide epitopes as diagnostic targets for Q fever in sheep

Triplex viability PCR for simultaneous quantification of viable Lactobacillus acidophilus, Streptococcus thermophilus, and Bifidobacterium bifidum in live microbial formulations

Tree species diversity promotes soil microbial carbon fixation gene abundance via nutrient-mediated interactions in subtropical forests

Basecalling-free resistance gene identification using a hybrid transformer in raw nanopore signals

Candida serves as a reservoir facilitating associating with facilitating the survival and pathogenesis of Helicobacter pylori

Stratified Management of Residual Gastric Cancer Risk After H. 1 pylori Eradication

Commentary: CRISPR–Cas systems against carbapenem resistance — from proof‑of‑concept to clinical translation

Genome-wide characterization of histone deacetylases in Fusarium proliferatum: phylogeny, structure, and stress responses

motA-mediated flagellar motility modulates biofilm formation and competitive nodulation in Mesorhizobium ciceri USDA 3378

Emerging fluconazole-resistant Candida parapsilosis in Australia: a case cluster and insights into the genetic diversity of this species

Consensus scoring-guided virtual screening identifies potent anti-saprolegniasis compounds targeting a P450 fusion protein

Multidrug-resistant Pseudomonas aeruginosa infections: current status, challenges, and prospects of phage therapy