Frontiers in Microbiology

Original Research

Published on 21 Nov 2025

Comprehensive fecal metagenomic and metabolomic analysis reveals the role of gut microbiota and metabolites in detecting brain metastasis of small cell lung cancer

in Microorganisms in Vertebrate Digestive Systems

Xu Han
Qiang-Guo Sun
Dan Zang
Jun Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1673983

1,960 views
1 citation

Editorial

Published on 21 Nov 2025

Editorial: Forest microbiome: dynamics and interactions in the anthropocene era

in Terrestrial Microbiology

Amrita Chakraborty
Amit Roy
Shulin He
Antonio Castellano-Hinojosa
Fred O. Asiegbu
Teresa Ann Coutinho

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1729625

1,691 views

Original Research

Published on 21 Nov 2025

A new perspective on Wendan decoction: attenuation of CUMS-induced anxiety in mice by regulating gut microbiota and neuroinflammation

in Microorganisms in Vertebrate Digestive Systems

Zixuan Guo
Qianqian Wang
Yunge Cao
Baiyan Wang
Boyi Zhang
Jiawei Huang
Yuanyuan Niu
Junhong Huang
Zilong Wang
Shuying Feng

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1708868

1,629 views

Original Research

Published on 21 Nov 2025

Microbial diversity in the critically endangered Orinoco crocodile (Crocodylus intermedius): influence of body site and Helicobacter spp. on microbiota composition

in Microbial Symbioses

Loreley Castelli
María Alexandra García-Amado
Carla A. Rudolf
Monica Contreras
Ariel S. Espinosa-Blanco
Filipa Godoy-Vitorino

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1697111

1,733 views

Original Research

Published on 21 Nov 2025

CVB3-induced P62 cleavage promotes ferroptosis through the NRF2/GPX4 axis and facilitates viral replication

in Virology

Feng He
Zhuo Liu
Miao Feng
Dingding Cao
Sen Li
Xuelai Liu
Yiting Jiang
Xiaoyu Yi
Zhewei Liu
Hailan Yao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1675667

1,512 views

Original Research

Published on 21 Nov 2025

Genomic characterization and evolution analysis of peste des petits ruminants virus in China from 2007 to 2024

in Virology

Jingyue Bao
Ruiying Jiang
Shujuan Wang
Qinghua Wang
Jiao Xu
Yunling Zhao
Yutian Liu
Lin Li
Xiaohua Wang
Zhiliang Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1697536

1,862 views

Original Research

Published on 21 Nov 2025

Bioremediation of coking contaminated soil: Mn(II)-oxidizing bacteria (MnOB) boost the degradation of high-molecular-weight polycyclic aromatic hydrocarbons (PAHs)

in Microbiotechnology

Xueqin Wang
Ya-nan Wang
Yidan Yan
Yuxin Liu
Huawei Wang
Yuewei Yang
Yuanwen Liu
Yingjie Sun
Jianwei Zhao
Ying Gao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1707146

1,614 views

Original Research

Published on 21 Nov 2025

Cross-generational ripples: sublethal fipronil exposure alters Binodoxys communis microbiome without lethal consequences

in Microbial Symbioses

Lisha Wang
Weijiao Liu
Li Wang
Kaixin Zhang
Dongyang Li
Jichao Ji
Junyu Luo
Xiangzhen Zhu
Jinjie Cui
Xueke Gao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1637234

1,513 views

Original Research

Published on 21 Nov 2025

The impact of temperature and sediment resuspension on microbial eukaryote recruitment from shallow Baltic Sea sediment

in Aquatic Microbiology

Ingrid Sassenhagen
Daniel P. R. Herlemann
Kaja Gentsch
Anke Kremp
Matthias Labrenz
Jörg Dutz

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1654505

1,276 views

Original Research

Published on 21 Nov 2025

Methylotrophic yeast Candida boidinii enhances the colonization of plant growth-promoting yeast Papiliotrema laurentii in the phyllosphere

in Microbial Symbioses

Kana Shigeta
Kosuke Shiraishi
Moritz Schroll
Rebekka Lauer
Frank Keppler
Yasuyoshi Sakai
Hiroya Yurimoto

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1677102

1,814 views
1 citation

Editorial

Published on 21 Nov 2025

Editorial: Mutualistic and antagonistic interactions in the human oral microbiome

in Microbial Symbioses

Wen Zhou
Shi Huang
Xiaojing Huang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1731807

1,365 views

Original Research

Published on 20 Nov 2025

Heterogeneity of the horizontal environment drives community assemblages and species coexistence of prokaryotic communities in cold seep sediments

in Extreme Microbiology

Qixuan Wu
Jingchun Feng
Yongji Huang
Song Zhong
Cun Li
Si Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1687453

1,723 views

Original Research

Published on 20 Nov 2025

Ear tissue as a diagnostic sample for pestivirus detection in semi-domesticated Eurasian tundra reindeer (Rangifer tarandus tarandus) in Norway

in Virology

Ester Malmström
Morten Tryland
Thomas Passler
Alice Becker
Stine Bull-Aurbakken
Scott Silvis
Rachel Phillips
Shollie Falkenberg

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1688206

1,241 views

Original Research

Published on 20 Nov 2025

Genistein supplementation modulates the intestinal microbiota–liver–lumbar muscle metabolic axis in DLY commercial pigs without concomitant changes in growth performance

in Microorganisms in Vertebrate Digestive Systems

Yong Du
Yiting Yang
Yan Wang
Yuanyuan Wu
Chengming Liu
Ziling Hao
Zhijuan Yan
Junxiang Mao
Jiaqi Wen
Ye Zhao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1686257

1,775 views

Original Research

Published on 20 Nov 2025

Clinical and radiological characteristics of Mpox pneumonia in immunosuppressed HIV-infected patients: a multicenter study from China

in Virology

Wei Wang
Zhongkai Zhou
Chunwang Yuan
Fuxiang Wang
Yue Yin
Lingling Zhao
Yanbin Shi
Budong Chen
Hongjun Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1705001

1,890 views

Review

Published on 20 Nov 2025

Gut microbiota and colorectal cancer: mechanistic insights, diagnostic advances, and microbiome-based therapeutic strategies

in Microorganisms in Vertebrate Digestive Systems

Bingbing Bai
Jianing Ma
Wenlong Xu
Xiaomin Chen
Xu Chen
Chao Lv
Wei Su
Yaoxu Li
Hongyin Sun
Baoyin Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1699893

3,434 views

Original Research

Published on 20 Nov 2025

Exploring the characteristics of gut microbiota in the development and progression of early-stage colorectal cancer based on metagenomic sequencing

in Microorganisms in Vertebrate Digestive Systems

Qianqian Chen
Jing Guan
Lu Yang
Jie Lv
Gen Gui
Jianhua Xu
Zhaoyun Yang
Xu Wang
Bin Sun

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1658160

1,763 views

Original Research

Published on 20 Nov 2025

Genomic dissection of the antimicrobial resistance epidemiology of Salmonella Typhimurium

in Antimicrobials, Resistance and Chemotherapy

Sandeep Kaur
Sally R. Partridge
Michael Payne
Vitali Sintchenko
Ruiting Lan

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1683995

1,940 views

Original Research

Published on 20 Nov 2025

Genetically engineered Pseudomonas aeruginosa with lipase regulation for production of rhamnolipids from waste frying oil

in Systems Microbiology

Runyu Yang
Yitong Shi
Jinyu Bian
Mengxiao Sun
Junchi Ma
Cailing Ren
Xueyan Feng
Yun Wang
Yuanhui Yang
Jianqiang Zhou

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1691217

2,031 views

Original Research

Published on 19 Nov 2025

Molecular transmission network analysis of newly diagnosed HIV-1 infections in Ningbo from 2018–2022

in Virology

Yue-Qi Yin
Yu-Hui Liu
Jing Zhu
Peng Shen
Yun-Peng Chen
Zhi-Qin Jiang
Hong-Bo Lin
Hong-Xia Ni
Ye-Xiang Sun

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1701408

1,325 views

Original Research

Published on 19 Nov 2025

Strain-specific tropism and transcriptional responses of enterovirus D68 infection in human spinal cord organoids

in Virology

Nathânia Dábilla
Sarah Maya
Colton McNinch
Taylor Eddens
Patrick T. Dolan
Megan Culler Freeman

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1698639

2,226 views
2 citations

Original Research

Published on 19 Nov 2025

Metabolomic profiling of indigenous lactic acid bacteria reveals functional traits shaping the flavor and bioactivity of Ecuadorian coffee

in Food Microbiology

Victor Cifuentes
Ioana C. Marinas
George Cătălin Marinescu
Roua Gabriela Popescu
Mariana C. Chifiriuc
Gabriela N. Tenea

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1697280

2,453 views
2 citations

Original Research

Published on 19 Nov 2025

Clinical and genomic characterization of Klebsiella pneumoniae in a district hospital in Chengdu, China

in Antimicrobials, Resistance and Chemotherapy

Yiyi Hu
Xingyu Lu
Yuyan Sun
Maowen Yu
Lei Zhang
Jianping Jiang
Juan Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1700934

1,758 views

Original Research

Published on 19 Nov 2025

PCV2 Cap protein nuclear import via importin α/β receptor: molecular insights and antiviral potential

in Virology

Cui Lin
Na Li
Lihan Tao
Haiqin Li
Jiezhi Ma
Chengcheng Wu
Fanfan Zhang
Shaopei Fang
Jia Tan
Yezhen Huang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1701697

1,727 views

39,488 articles

articles

Comprehensive fecal metagenomic and metabolomic analysis reveals the role of gut microbiota and metabolites in detecting brain metastasis of small cell lung cancer

Editorial: Forest microbiome: dynamics and interactions in the anthropocene era

A new perspective on Wendan decoction: attenuation of CUMS-induced anxiety in mice by regulating gut microbiota and neuroinflammation

Microbial diversity in the critically endangered Orinoco crocodile (Crocodylus intermedius): influence of body site and Helicobacter spp. on microbiota composition

CVB3-induced P62 cleavage promotes ferroptosis through the NRF2/GPX4 axis and facilitates viral replication

Genomic characterization and evolution analysis of peste des petits ruminants virus in China from 2007 to 2024

Bioremediation of coking contaminated soil: Mn(II)-oxidizing bacteria (MnOB) boost the degradation of high-molecular-weight polycyclic aromatic hydrocarbons (PAHs)

Cross-generational ripples: sublethal fipronil exposure alters Binodoxys communis microbiome without lethal consequences

The impact of temperature and sediment resuspension on microbial eukaryote recruitment from shallow Baltic Sea sediment

Methylotrophic yeast Candida boidinii enhances the colonization of plant growth-promoting yeast Papiliotrema laurentii in the phyllosphere

Editorial: Mutualistic and antagonistic interactions in the human oral microbiome

Heterogeneity of the horizontal environment drives community assemblages and species coexistence of prokaryotic communities in cold seep sediments

Ear tissue as a diagnostic sample for pestivirus detection in semi-domesticated Eurasian tundra reindeer (Rangifer tarandus tarandus) in Norway

Genistein supplementation modulates the intestinal microbiota–liver–lumbar muscle metabolic axis in DLY commercial pigs without concomitant changes in growth performance

Clinical and radiological characteristics of Mpox pneumonia in immunosuppressed HIV-infected patients: a multicenter study from China

Gut microbiota and colorectal cancer: mechanistic insights, diagnostic advances, and microbiome-based therapeutic strategies

Exploring the characteristics of gut microbiota in the development and progression of early-stage colorectal cancer based on metagenomic sequencing

Genomic dissection of the antimicrobial resistance epidemiology of Salmonella Typhimurium

Genetically engineered Pseudomonas aeruginosa with lipase regulation for production of rhamnolipids from waste frying oil

Molecular transmission network analysis of newly diagnosed HIV-1 infections in Ningbo from 2018–2022

Strain-specific tropism and transcriptional responses of enterovirus D68 infection in human spinal cord organoids

Metabolomic profiling of indigenous lactic acid bacteria reveals functional traits shaping the flavor and bioactivity of Ecuadorian coffee

Clinical and genomic characterization of Klebsiella pneumoniae in a district hospital in Chengdu, China

PCV2 Cap protein nuclear import via importin α/β receptor: molecular insights and antiviral potential