Frontiers in Microbiology

Original Research

Published on 28 Nov 2025

Lobetyolin ameliorates DSS-induced ulcerative colitis in mice by alleviating inflammation, restoring barrier function, and modulating gut microbiota–metabolite interactions

in Food Microbiology

Min Chang
Fengping Liu
Junhui Lu
Qing Wang
Jingwei Liu
Xing Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1710707

2,282 views

Original Research

Published on 28 Nov 2025

Bacterial community in homemade kimchi and probiotic characterization of Lactiplantibacillus plantarum HQ04

in Food Microbiology

Wei Zhao
Meilin Chen
Yixuan Zhang
Yiping Fan
Pinyao Zhao
Ling Zhou
Weimin Ouyang
Jie Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1700442

2,008 views

Original Research

Published on 28 Nov 2025

Mycobacteriophage Yasnaya_Polyana and its engineered lytic derivative: specificity of regulatory motifs and lytic potential

in Phage Biology

Egor Shitikov
Maja Malakhova
Sofya Kuznetsova
Dmitry Bespiatykh
Roman Gorodnichev
Sergei Kiselev
Maria Kornienko
Ksenia Klimina
Aleksandra Strokach
Arina German

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1713073

2,341 views

Original Research

Published on 28 Nov 2025

Structural and genomic insights into erythromycin and clindamycin resistance of group B Streptococcus isolates in rural West Virginia, United States

in Antimicrobials, Resistance and Chemotherapy

Annabelle P. Smith
Lillie M. Powell
Amaira M. Palmer
Soo Jeon Choi
Rita Berisio
Ryan Demkowicz
Slawomir Lukomski

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1686688

2,081 views

Original Research

Published on 28 Nov 2025

Insights into the microbiome of mine drainage from the Mária mine in Rožňava, Slovakia: a metagenomic approach

in Microbiological Chemistry and Geomicrobiology

Lenka Hagarová
Daniel Kupka

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1675058

1,877 views

Original Research

Published on 28 Nov 2025

Efficacy of physical and chemical disinfection against clinically relevant free-living amoebae isolated from drinking water and plumbing biofilms

in Aquatic Microbiology

Muhammad Atif Nisar
Claire Hayward
Kirstin E. Ross
Melissa H. Brown
Richard Bentham
Harriet Whiley

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1654984

2,027 views
1 citation

Original Research

Published on 28 Nov 2025

Geno-pheno characterization of crop rhizospheres: an integrated Raman spectroscopy and microbiome approach in conventional and organic agriculture

in Terrestrial Microbiology

Yejin Son
Peisheng He
Mathew Baldwin
Guangyu Li
Zijian Wang
April Z. Gu
Jenny Kao-Kniffin

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1721013

1,620 views

Original Research

Published on 28 Nov 2025

Microbiota–sphingolipid pathway in generalized epilepsy: evidence from Mendelian randomization and clinical metabolomics

in Microorganisms in Vertebrate Digestive Systems

Jiayin Gong
Mingxing Lin
Lizhen Chen
Wenting Xiong
Yuying Zhang
Changyun Liu
Shenggen Chen
Wanhui Lin
Chaofeng Zhu
Huapin Huang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1662050

1,781 views

Original Research

Published on 28 Nov 2025

Metabolic reprogramming by pseudorabies virus: nucleotide metabolism as a central vulnerability for viral replication and pathogenesis

in Virology

Xiaoyong Chen
Qingsen Wang
Xi Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1683365

2,201 views

Review

Published on 28 Nov 2025

Analyzing the gut liver axis: a dual role of the microbiome in the genesis, progression, and treatment of liver cell carcinoma

in Microorganisms in Vertebrate Digestive Systems

Qianzhu Li
Yafang Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1701101

2,038 views

Original Research

Published on 28 Nov 2025

The gut microbiota in liver transplantation recipients during the perioperative and postoperative recovery period

in Microorganisms in Vertebrate Digestive Systems

Zhongyuan Bai
Yan Wang
Yaoping Li
Jun Xu
Zhiyong Lai

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1684303

1,711 views

Original Research

Published on 28 Nov 2025

Lung microbiome signatures and explainable predictive modeling of glucocorticoid response in severe community acquired pneumonia

in Infectious Agents and Disease

Yeong-Nan Cheng
Guan-Ting Chen
Wei-Chih Huang
Yen-Peng Chiu
Yun Tang
Pin-Kuei Fu
Tzong-Yi Lee

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1706432

1,677 views

Original Research

Published on 28 Nov 2025

Dietary supplementation with corn distillers’ dried grains with solubles improves egg quality in Haidong chickens by promoting beneficial gut microbiota and modulating serum biochemical profiles

in Microorganisms in Vertebrate Digestive Systems

Gaoliang Bao
Hong Wei
Decang He
Dejun Wang
Baoan Ding
Junxia Zhang
Jiayu Tian
Pengshun Wang
Baolin Shen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1709407

1,612 views
1 citation

Original Research

Published on 28 Nov 2025

Functional redundancy enhances microbial resilience in streams: mitigating flow perturbations

in Aquatic Microbiology

Qiaoyan Lin
Yixin Zhang
Rob Marrs
Naicheng Wu
Raju Sekar
Noël Juvigny-Khenafou
Christoph D. Matthaei
Jeremy Piggott

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1581882

2,041 views

Review

Published on 28 Nov 2025

Ecology and functions of Trichoderma in coffee and cocoa agroecosystems: bibliometric and systematic insights for sustainable agriculture

in Microbe and Virus Interactions with Plants

Henry W. Santillan-Culquimboz
Santos Triunfo Leiva
Milagros Ninoska Munoz-Salas
Wagner Meza-Maicelo
Flavio Lozano-Isla
Manuel Oliva-Cruz
César R. Balcázar-Zumaeta

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1717484

3,126 views

Original Research

Published on 28 Nov 2025

Double-stranded RNA antiviral signature in early multiple sclerosis

in Virology

Vasileios Gouzouasis
Ioannis Sarrigeorgiou
Margaritis Tsifintaris
Nikos Markoglou
Urania Georgopoulou
Peggy Lymberi
Maria Anagnostouli
Lesley Probert
Antonis Giannakakis

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1706133

2,086 views

Review

Published on 28 Nov 2025

Lung-gut axis, intestinal microbiota, and pulmonary fibrosis: mechanisms and therapeutic potential

in Microorganisms in Vertebrate Digestive Systems

Jihao Yang
Junwen Wang
Jia Li
Shuo Yang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1711299

3,041 views
1 citation

Original Research

Published on 27 Nov 2025

Lung and gut microbiota profiling in severe community acquired pneumonia patients: a prospective pilot study

in Microorganisms in Vertebrate Digestive Systems

Wei Zou
Ruobin Zheng
Sheng Lin
Chunhua Lu
Baosong Xie

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1717822

1,474 views

Original Research

Published on 27 Nov 2025

Substitution of 25% of chemical fertilizer nitrogen with organic amendments nitrogen reduces N2O emissions from tea plantation soils in subtropical China

in Terrestrial Microbiology

Qiao Sun
Yu Cheng
Suzhen Yin
Xiaojing Sun
Xiaoyue Song
Xinyue Song
Wanyu Shen
Biao Meng
Xinxiao Wang
Xintong Lv

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1715814

1,537 views
1 citation

Original Research

Published on 27 Nov 2025

Co-inoculation with Streptomyces thermovulgaris and commercial microbial agents enhances the reduction of antibiotic resistance genes in cattle manure composting: driving mechanisms involving microbial communities and mobile genetic elements

in Antimicrobials, Resistance and Chemotherapy

Erguang Jin
Daoyu Gao
Yuan Zhou
Pingmin Wan
Jie Chen
Ping Gong
Peng Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1688304

1,026 views
1 citation

Original Research

Published on 27 Nov 2025

Unearthing anti-MRSA agents from alpine lichens: discovery and characterization of bioactive compounds in Cetraria islandica from the snowy Cangshan region

in Antimicrobials, Resistance and Chemotherapy

Junlin Lu
Hongqiao Tian
Fangrong Liang
Zhiyi Xiang
Menglong Liu
Haiyan Ding

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1688435

1,334 views

Original Research

Published on 27 Nov 2025

Gut microbiota metabolites and key target molecules in allergic rhinitis: a multi-omics study of gut-nose axis regulation via the inflammation-metabolism network

in Microorganisms in Vertebrate Digestive Systems

Jingqi Zhang
Mengqi Zhao
Ya Yu
Yining Zeng
Meiyi Sun
Chuanyu Wu
Tao Guo
Liping Lin
Zhiqing Liu
Hui Xie

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1702518

2,540 views

Original Research

Published on 27 Nov 2025

Decoding drug tolerance: insights into the Rv0274 gene's role in isoniazid tolerance

in Antimicrobials, Resistance and Chemotherapy

Min Li
Yun Wang
Xiaohong Xiang
Lingling Dong
Qiming Li
Zhou Liu
Wenwen Chu
Ye Naifang
Zhen Gong
Qiang Zhou

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1697416

1,533 views

Original Research

Published on 27 Nov 2025

Effects of resveratrol on growth performance, immune function, and intestinal microbiota in Cherry Valley ducks

in Microorganisms in Vertebrate Digestive Systems

Tiantian Gu
Yu Wang
Yan Chen
Jian Li
Shiyu Wang
Yonghai Wang
Xintong Li
Chunyang Wang
Fayi Xiao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1689994

1,149 views

39,626 articles

articles

Lobetyolin ameliorates DSS-induced ulcerative colitis in mice by alleviating inflammation, restoring barrier function, and modulating gut microbiota–metabolite interactions

Bacterial community in homemade kimchi and probiotic characterization of Lactiplantibacillus plantarum HQ04

Mycobacteriophage Yasnaya_Polyana and its engineered lytic derivative: specificity of regulatory motifs and lytic potential

Structural and genomic insights into erythromycin and clindamycin resistance of group B Streptococcus isolates in rural West Virginia, United States

Insights into the microbiome of mine drainage from the Mária mine in Rožňava, Slovakia: a metagenomic approach

Efficacy of physical and chemical disinfection against clinically relevant free-living amoebae isolated from drinking water and plumbing biofilms

Geno-pheno characterization of crop rhizospheres: an integrated Raman spectroscopy and microbiome approach in conventional and organic agriculture

Microbiota–sphingolipid pathway in generalized epilepsy: evidence from Mendelian randomization and clinical metabolomics

Metabolic reprogramming by pseudorabies virus: nucleotide metabolism as a central vulnerability for viral replication and pathogenesis

Analyzing the gut liver axis: a dual role of the microbiome in the genesis, progression, and treatment of liver cell carcinoma

The gut microbiota in liver transplantation recipients during the perioperative and postoperative recovery period

Lung microbiome signatures and explainable predictive modeling of glucocorticoid response in severe community acquired pneumonia

Dietary supplementation with corn distillers’ dried grains with solubles improves egg quality in Haidong chickens by promoting beneficial gut microbiota and modulating serum biochemical profiles

Functional redundancy enhances microbial resilience in streams: mitigating flow perturbations

Ecology and functions of Trichoderma in coffee and cocoa agroecosystems: bibliometric and systematic insights for sustainable agriculture

Double-stranded RNA antiviral signature in early multiple sclerosis

Lung-gut axis, intestinal microbiota, and pulmonary fibrosis: mechanisms and therapeutic potential

Lung and gut microbiota profiling in severe community acquired pneumonia patients: a prospective pilot study

Substitution of 25% of chemical fertilizer nitrogen with organic amendments nitrogen reduces N2O emissions from tea plantation soils in subtropical China

Co-inoculation with Streptomyces thermovulgaris and commercial microbial agents enhances the reduction of antibiotic resistance genes in cattle manure composting: driving mechanisms involving microbial communities and mobile genetic elements

Unearthing anti-MRSA agents from alpine lichens: discovery and characterization of bioactive compounds in Cetraria islandica from the snowy Cangshan region

Gut microbiota metabolites and key target molecules in allergic rhinitis: a multi-omics study of gut-nose axis regulation via the inflammation-metabolism network

Decoding drug tolerance: insights into the Rv0274 gene's role in isoniazid tolerance

Effects of resveratrol on growth performance, immune function, and intestinal microbiota in Cherry Valley ducks