Frontiers in Microbiology

Original Research

Published on 07 Aug 2025

Loquat-tea intercropping enhances rhizosphere microbial diversity and functional profiles in tea soil ecosystems

in Terrestrial Microbiology

Chengyi Zou
Tianfei Dai
Zhonghua Liang
Mingyan Li
Lina Meng
Xianming Zhao
Nianzhen Li
Qin Wei
Mohamed A. Abd Elhamid
Amr M. Atif

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1651997

1,526 views
1 citation

Original Research

Published on 07 Aug 2025

Taxonomic and functional diversity of alkali-tolerant bacteria enriched from the Taklimakan Desert

in Extreme Microbiology

Feng Wen
Guo Yang
Xueling Zhao
Tiantian Zhao
Linquan Bai
Zhanfeng Xia

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1580401

1,958 views
1 citation

Systematic Review

Published on 07 Aug 2025

Virus in infectious uveitis: bibliometric analysis and a clinical study

in Infectious Agents and Disease

Junhui Shen
Jinfeng Kong
Yufeng Xu
Yanyan Hu
Lei Feng

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1588195

2,615 views

Original Research

Published on 06 Aug 2025

Characteristics of CVA16 B1c strains isolated for the first time in the Heilongjiang Province of China

in Virology

Tingting Yang
Qiang Sun
Hui Liu
Ming Yang
Shuhong Chen
Wei Sun
Jun Xu
Dongmei Yan
Shuangli Zhu
Zhenzhi Han

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1634547

2,590 views
2 citations

Original Research

Published on 06 Aug 2025

Biodiversity and culture of prokaryotes inhabiting haloalkaline and meromictic Soap Lake, Washington, USA

in Extreme Microbiology

Olivia J. M. Vanderlaan
Emily M. Simmons
Kelli M. Damman
Makenna D. Waddell
Savannah F. Ross
Amanda D. Armstrong
Mackenzie L. Walker
S. Josiah Sattley
W. Matthew Sattley

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1620605

1,881 views
1 citation

Mini Review

Published on 06 Aug 2025

Unveiling the impact of non-coding RNAs on virus-induced cellular autophagy: roles and research advances

in Virology

Ming Yu
Ying Yi
Honglin Yang
Yi Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1632425

1,899 views

Original Research

Published on 06 Aug 2025

Identification of a Penicillium oxalicum fungus isolate and its pathogenicity against Panonychus citri (McGregor)

in Microbial Symbioses

Danchao Du
Jia Lyu
Zhengdong Huang
Baoju An
Li Zhu
Zhanxu Pu
Shunmin Liu
Xiurong Hu
Lianming Lu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1619976

1,863 views

Original Research

Published on 06 Aug 2025

Changes of intestinal microbiota and liver metabolomics in yellow catfish (Pelteobagrus fulvidraco) before and after rice flowering in rice-fish symbiosis farmed mode

in Microorganisms in Vertebrate Digestive Systems

Rui Cheng
Zhuoqi Ying
Yang Yang
Chongying Zhang
Wei Zhou
Zhiming Zhang
Huiping Ding
Ya Zhou
Chi Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1617168

1,966 views
1 citation

Original Research

Published on 06 Aug 2025

Comparative evaluation of sequencing platforms: Pacific Biosciences, Oxford Nanopore Technologies, and Illumina for 16S rRNA-based soil microbiome profiling

in Systems Microbiology

Vladimir Veselovsky
Mikhail Romanov
Polina Zoruk
Andrey Larin
Vladislav Babenko
Maxim Morozov
Aleksandra Strokach
Natalia Zakharevich
Sadokatkhon Khamidova
Albina Danilova

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1633360

6,989 views
8 citations

Original Research

Published on 06 Aug 2025

Microbial degradation of Diquat by strain Meyerozyma guilliermondii Wyslmt: Identification of transformation products and clarification of degradation pathways

in Microbiotechnology

Fangyuan Wang
Jinrong Jia
Wei Gu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1652141

1,171 views

Original Research

Published on 06 Aug 2025

Protein functional domain analysis enhances genotype–phenotype associations in comparative genomic studies of Pseudomonas aeruginosa

in Antimicrobials, Resistance and Chemotherapy

Irene Bianconi
Alfonso Esposito
Silvano Piazza
Elena Piffer
Elisabetta Pagani
Olivier Jousson

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1569118

2,360 views

Original Research

Published on 06 Aug 2025

Multigene phylogeny, morphology, and pathogenicity uncover two novel Globisporangium species (Oomycota) from freshwater habitats in northwestern Iran

in Aquatic Microbiology

Reza Ahadi
Alireza Alizadeh
Ali Chenari Bouket
Hossein Masigol
Hans-Peter Grossart

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1615096

1,640 views

Original Research

Published on 06 Aug 2025

Phylogenomic analysis of OXA-23-positive and genetic context of rare NDM-1-producing carbapenem-resistant Acinetobacter baumannii isolates in a teaching hospital in China

in Antimicrobials, Resistance and Chemotherapy

Su Dong
Jianjiang Lou
Caiping Mao
Yuejuan Fang
Huan Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1575257

1,887 views

Original Research

Published on 06 Aug 2025

Coral garden conservation and restoration: how host taxon and ex-situ maintenance affect the microbiome of soft and hard corals

in Microbial Symbioses

Marcellina Rola
Márcio A. G. Coelho
Christian Pruckner
Manuela Quiroga-Pérez
Willem Stock
Núria Baylina
Aschwin H. Engelen
Heike Wägele
Ester A. Serrão
Pedro R. Frade

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1605105

2,750 views

Original Research

Published on 06 Aug 2025

Porphyromonas gingivalis deteriorates autism spectrum disorders by disturbing the gut and oral microbiota

in Microorganisms in Vertebrate Digestive Systems

Bosheng Li
Yanan Qiao
Yongming Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1579128

2,041 views

Original Research

Published on 06 Aug 2025

Enrichment of short-chain fatty acid-producing bacteria by pH-responsive sodium alginate and chitosan-encapsulated quercetin

in Microorganisms in Vertebrate Digestive Systems

Qianyu Bai
Zhongling Zhao
Yujing Duan
Runqiu Cai
Yinzhu Chen
Chaoyu Zhou
Xinyuan Tian
Yifei Yang
Haiyan Wu
Mingju Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1594012

2,884 views

Systematic Review

Published on 06 Aug 2025

Global research trends in gut microbiota and cellular senescence: a bibliometric and visual analysis from 2015 to 2025

in Microorganisms in Vertebrate Digestive Systems

Shaoyang Huang
Jiangyan Li
Dandan Gu
Zhengliang Li
Hongyun Chen
Wei Xiong

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1623875

4,456 views
1 citation

Original Research

Published on 06 Aug 2025

The cultivation of Panax notoginseng enhances the metabolites and microbial network complexity in the soil of Pinus armandii rather than Pinus kesiya

in Microbe and Virus Interactions with Plants

Jingying Hei
Yue Li
Rui Rui
Noor Faisal
Jiansong Peng
Biao Wang
Shu Wang
Xiahong He

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1616266

2,056 views

Review

Published on 06 Aug 2025

Molecular insights and diagnostic advances in strawberry-infecting viruses

in Microbe and Virus Interactions with Plants

Bo Yan
Mengjiao Lu
Jijing Han
Yuhao Cao
Fei Yan
Xuemei Song

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1655696

3,245 views
1 citation

Original Research

Published on 06 Aug 2025

Recombinase polymerase amplification combined with CRISPR/Cas12a technology for rapid on-site detection of duck adenovirus 3

in Infectious Agents and Disease

Qi-Zhang Liang
Wei Chen
Yuhai Bi
Weiwei Wang
Rong-Chang Liu
Qiu-Ling Fu
Guang-Hua Fu
Long-Fei Cheng
Nan-Song Jiang
Ting Zhu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1607974

1,987 views

Original Research

Published on 06 Aug 2025

Macrogenomics-based analysis of rumen microbial composition and their metabolic pathways in yaks under different dietary concentrate-to-forage ratios

in Microorganisms in Vertebrate Digestive Systems

Fajie Gou
Yincang Han
Yonggang Sun
Weiqing Ding
Shenwei Jin
Yaqian Liu
Jianyu Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1587474

1,623 views

Editorial

Published on 06 Aug 2025

Editorial: Advances in beneficial and pathogenic plant-microbe interactions in cereal crops

in Microbe and Virus Interactions with Plants

Febri Doni
Jian Chen
Kumudini Belur Satyan

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1663889

1,583 views

Original Research

Published on 05 Aug 2025

First detection of Dickeya fangzhongdai in Italy: double-edged role from virulent on vegetables to potent VOC-mediated anti-Xylella fastidiosa activity

in Microbe and Virus Interactions with Plants

Miloud Sabri
Kaoutar El Handi
Khaoula Mektoubi
Antonio Trani
Orges Cara
Toufic Elbeaino

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1655235

2,009 views
1 citation

Original Research

Published on 05 Aug 2025

Dynamic changes of Ct values of N gene and ORF1ab genes and laboratory parameters in patients with COVID-19 caused by SARS-CoV-2 B.1, BA.2, and BA.5 variants and their correlation with clinical characteristics

in Virology

Wenjing Yang
Taoran Chen
Qi Zhou
Jiancheng Xu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1606306

2,110 views

38,987 articles

articles

Loquat-tea intercropping enhances rhizosphere microbial diversity and functional profiles in tea soil ecosystems

Taxonomic and functional diversity of alkali-tolerant bacteria enriched from the Taklimakan Desert

Virus in infectious uveitis: bibliometric analysis and a clinical study

Characteristics of CVA16 B1c strains isolated for the first time in the Heilongjiang Province of China

Biodiversity and culture of prokaryotes inhabiting haloalkaline and meromictic Soap Lake, Washington, USA

Unveiling the impact of non-coding RNAs on virus-induced cellular autophagy: roles and research advances

Identification of a Penicillium oxalicum fungus isolate and its pathogenicity against Panonychus citri (McGregor)

Changes of intestinal microbiota and liver metabolomics in yellow catfish (Pelteobagrus fulvidraco) before and after rice flowering in rice-fish symbiosis farmed mode

Comparative evaluation of sequencing platforms: Pacific Biosciences, Oxford Nanopore Technologies, and Illumina for 16S rRNA-based soil microbiome profiling

Microbial degradation of Diquat by strain Meyerozyma guilliermondii Wyslmt: Identification of transformation products and clarification of degradation pathways

Protein functional domain analysis enhances genotype–phenotype associations in comparative genomic studies of Pseudomonas aeruginosa

Multigene phylogeny, morphology, and pathogenicity uncover two novel Globisporangium species (Oomycota) from freshwater habitats in northwestern Iran

Phylogenomic analysis of OXA-23-positive and genetic context of rare NDM-1-producing carbapenem-resistant Acinetobacter baumannii isolates in a teaching hospital in China

Coral garden conservation and restoration: how host taxon and ex-situ maintenance affect the microbiome of soft and hard corals

Porphyromonas gingivalis deteriorates autism spectrum disorders by disturbing the gut and oral microbiota

Enrichment of short-chain fatty acid-producing bacteria by pH-responsive sodium alginate and chitosan-encapsulated quercetin

Global research trends in gut microbiota and cellular senescence: a bibliometric and visual analysis from 2015 to 2025

The cultivation of Panax notoginseng enhances the metabolites and microbial network complexity in the soil of Pinus armandii rather than Pinus kesiya

Molecular insights and diagnostic advances in strawberry-infecting viruses

Recombinase polymerase amplification combined with CRISPR/Cas12a technology for rapid on-site detection of duck adenovirus 3

Macrogenomics-based analysis of rumen microbial composition and their metabolic pathways in yaks under different dietary concentrate-to-forage ratios

Editorial: Advances in beneficial and pathogenic plant-microbe interactions in cereal crops

First detection of Dickeya fangzhongdai in Italy: double-edged role from virulent on vegetables to potent VOC-mediated anti-Xylella fastidiosa activity

Dynamic changes of Ct values of N gene and ORF1ab genes and laboratory parameters in patients with COVID-19 caused by SARS-CoV-2 B.1, BA.2, and BA.5 variants and their correlation with clinical characteristics