Frontiers in Microbiology | Aquatic Microbiology

Original Research

Published on 13 Feb 2026

Accumulation of recalcitrant dissolved organic carbon during cyanobacterial blooms in Meiliang Bay, Lake Taihu: insights into the microbial carbon pump

in Aquatic Microbiology

Xiaohan Wu
Xiaogang Chen
Dan Wu
Fenfen Zhang
Jinzhou Du

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1753025

535 views

Original Research

Accepted on 12 Feb 2026

Linking microbes to in situ methane oxidation rates in a eutrophic freshwater lake

in Aquatic Microbiology

Jennifer A Baily
Zachary W Hudspeth
Joshua L Morningstar
Howard P Mendlovitz
Christopher S Martens
Karen G Lloyd

Frontiers in Microbiology

Original Research

Accepted on 12 Feb 2026

Dynamic changes of protist community composition along a surface water-groundwater transect in the Danube wetland Lobau, Vienna, Austria

in Aquatic Microbiology

Angela Cukusic
Clemens Karwautz
Christina Murhammer
Grit Rasch
Marharyta Biletska
Christian Griebler

Frontiers in Microbiology

Original Research

Published on 10 Feb 2026

Microbial diversity and water quality changes in mangrove sediments in Quanzhou Bay

in Aquatic Microbiology

Wenzhou Zhang
Huixuan Jiang
Qingyu Zhu
Ziying Shi
Wenbiao Chen
Xiaowen Xu
Fei Peng
Yulang Chi

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1743704

610 views

Original Research

Published on 10 Feb 2026

Composition, diversity and functional potential of bacterial community in four stony coral species from the South China Sea

in Aquatic Microbiology

Zimu Li
Xinyu Liao
Li Mo
Qi Liao
Kaijun Lin
Xinyi Bao
Jijia Sun
Xiaoyong Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1759094

447 views

Editorial

Published on 10 Feb 2026

Editorial: Occurrence of harmful algal blooms and marine biotoxins

in Aquatic Microbiology

Pierina Visciano

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1794724

329 views

Original Research

Accepted on 05 Feb 2026

System design and habitat type drive microbial communities in recirculating aquaculture systems: comparison of conventional fish-only and sustainable aquaponic systems

in Aquatic Microbiology

Alberto Ruiz
Karl Blyth Andree
Dolors Furones Nozal
Daniel Scicchitano
Marco Candela
Ricard Carbó
Enric Gisbert

Frontiers in Microbiology

139 views

Original Research

Accepted on 04 Feb 2026

Chlamy_ChloroPred: A deep learning-based, highly accurate binary classifier for chloroplast protein prediction in the model microalga, Chlamydomonas reinhardtii, with potential cross-proteome versatility

in Aquatic Microbiology

Hong Il Choi
Sung Ho Lee
Il Hyung Lee
Yong Jae Lee
Jin-Ho Yun
Dong-Yun Choi
Dae-Hyun Cho
Bum-Soo Shin
Junyoung Chun
Dong Won Lee

Frontiers in Microbiology

167 views

Editorial

Accepted on 02 Feb 2026

EDITORIAL: Protistan Phagotrophy and its far reaching implications

in Aquatic Microbiology

Milos Legner
Edward Fillery
Miroslav Macek

Frontiers in Microbiology

360 views

Mini Review

Accepted on 31 Jan 2026

Single-cell Raman Insights into Microbial Strategies for Sustainable Phosphorus Mining and Recycling

in Aquatic Microbiology

Xiaoyan Jing
Pengcheng Sun
Huihui Pan
Dong Cheng
Guangxia Ma

Frontiers in Microbiology

191 views

Original Research

Accepted on 30 Jan 2026

Ecological Responses of Antarctic Chaetoceros spp. to Simulated Melting and Salinity Shifts

in Aquatic Microbiology

Savannah Zigic
Olga Mangoni
Emanuela Serino
Francesco Bolinesi

Frontiers in Microbiology

203 views

Original Research

Accepted on 30 Jan 2026

Comparative Genomics of Crucian Carp-Isolated Flavobacterium psychrophilum: A Foundation for the Prevention and Control of Overwintering Mortality Syndrome in Freshwater Fish in China

in Aquatic Microbiology

Hucheng jiang
zhe Zhao
Yanhua Zhao
Kai Hao
Runbo Li
Aijun Xia
Hui Xue

Frontiers in Microbiology

119 views

Original Research

Accepted on 29 Jan 2026

Monsoon-driven short-term temporal changes and geomorphological controls on bacterial community dynamics in Korean coastal lagoons

in Aquatic Microbiology

JungHyun Kwak
Sungmin Hwang
Dongyoung Kim
Dukki Han
Hyun Je Park

Frontiers in Microbiology

136 views

Editorial

Accepted on 28 Jan 2026

Mitigating Microbial Contamination of Drinking Water Sources

in Aquatic Microbiology

Mohamed Azab El-Liethy
Sylvester Chibueze Izah
Godlisten Shao
Matthew Chidozie Ogwu
Ilunga Kamika

Frontiers in Microbiology

530 views

Original Research

Accepted on 27 Jan 2026

Advancing Aquafeed: Prebiotic, Antimicrobial, Antioxidant and Immunomodulatory Benefits of Innovative Ingredients from Farming Systems

in Aquatic Microbiology

Mariana Girão
Diogo Amaral
Gabriel Campos
Ralph Urbatzka
Helena Peres
Rodrigo Ozorio
Maria Fátima Carvalho

Frontiers in Microbiology

276 views

Original Research

Published on 27 Jan 2026

Microbiome changes in the sponge Halichondria panicea along the Baltic Sea salinity gradient

in Aquatic Microbiology

Philipp Hoy
Christiane Hassenrück
Felix Mittermayer-Schmittmann
Lara Schmittmann
Klaus Jürgens

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1723082

597 views

Original Research

Accepted on 26 Jan 2026

Bellamya purificata mitigate the impact of Pomacea canaliculata through gut microbial changes in rice-snail co-culture System

in Aquatic Microbiology

JiaQian Wu
Kangqi ZHOU
Liuping Long
Yong Lin
Zhong Chen
Junqi Qin
Xuesong Du
Hui Wei
Hui Luo
Fangdong Yu

Frontiers in Microbiology

239 views

Original Research

Published on 26 Jan 2026

Genome-based characterization of AHPND and non-AHPND Vibrio campbellii isolates from Republic of Korea

in Aquatic Microbiology

So-Young Lee
Hee-Jae Choi
Seonhyun Lee
Jaeyoung Choi
Jun Soung Kwak
Yue Jai Kang
Sung-Chul Hong

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1724818

921 views

Original Research

Published on 23 Jan 2026

Machine learning reveals microbial interactions driving plastic degradation across plastisphere environments

in Aquatic Microbiology

Akib Al Mahir
Arjun Sathyan Kulathuvayal
Yunjian Lei
Qijun Zhang
Luguang Wang
Yanqing Su
Liyuan Hou

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1691658

1,404 views

Original Research

Published on 23 Jan 2026

Determining biocide efficacy for treating established sulfate-reducing biofilms using flow cell systems

in Aquatic Microbiology

Gloria N. Okpala
Anna L. Walker
Craig Brideau
Pina Colarusso
Lisa M. Gieg

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1646177

1,856 views

Original Research

Published on 22 Jan 2026

The plastisphere and river systems as reservoirs for antibiotic resistant bacteria

in Aquatic Microbiology

Soraya Alfonsi
Francesca Racciatti
Frank Guzman
Attilio Fabbretti
Pohl Milon
Luca Agostino Vitali
Roberto Spurio
Dezemona Petrelli

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1721325

1,323 views

Original Research

Published on 22 Jan 2026

Single-cell RNA-seq reveals a key role for Vibrio cholerae Mak toxins in Tetrahymena pyriformis killing and bacterial survival

in Aquatic Microbiology

Jonah M. Moon
M. Mozammel Hoque
Dana Ronin
Parisa Noorian
Joyce To
Scott A. Rice
Diane McDougald
Gustavo Espinoza-Vergara

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1729243

1,282 views

Original Research

Published on 21 Jan 2026

Consensus scoring-guided virtual screening identifies potent anti-saprolegniasis compounds targeting a P450 fusion protein

in Aquatic Microbiology

Muhammad Akhtar Ali
Anum Javaid
Charuvaka Muvva
Natarajan Arul Murugan
Vaibhav Srivastava

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1723326

859 views

Original Research

Published on 21 Jan 2026

Prokaryotic community structure and auxin biosynthesis in early developmental stages of farmed Atlantic Nori (Porphyra spp.)

in Aquatic Microbiology

Francisco Cortez
Enrico Nanetti
Guilherme Chaves
André C. Pereira
Madalena C. Mendes
Inês Oliveira
Daniela Leuzzi
Helena Abreu
Margarida Martins
Ricardo B. Leite

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1750184

1,306 views

1,941 articles

articles

Accumulation of recalcitrant dissolved organic carbon during cyanobacterial blooms in Meiliang Bay, Lake Taihu: insights into the microbial carbon pump

Linking microbes to in situ methane oxidation rates in a eutrophic freshwater lake

Dynamic changes of protist community composition along a surface water-groundwater transect in the Danube wetland Lobau, Vienna, Austria

Microbial diversity and water quality changes in mangrove sediments in Quanzhou Bay

Composition, diversity and functional potential of bacterial community in four stony coral species from the South China Sea

Editorial: Occurrence of harmful algal blooms and marine biotoxins

System design and habitat type drive microbial communities in recirculating aquaculture systems: comparison of conventional fish-only and sustainable aquaponic systems

Chlamy_ChloroPred: A deep learning-based, highly accurate binary classifier for chloroplast protein prediction in the model microalga, Chlamydomonas reinhardtii, with potential cross-proteome versatility

EDITORIAL: Protistan Phagotrophy and its far reaching implications

Single-cell Raman Insights into Microbial Strategies for Sustainable Phosphorus Mining and Recycling

Ecological Responses of Antarctic Chaetoceros spp. to Simulated Melting and Salinity Shifts

Comparative Genomics of Crucian Carp-Isolated Flavobacterium psychrophilum: A Foundation for the Prevention and Control of Overwintering Mortality Syndrome in Freshwater Fish in China

Monsoon-driven short-term temporal changes and geomorphological controls on bacterial community dynamics in Korean coastal lagoons

Mitigating Microbial Contamination of Drinking Water Sources

Advancing Aquafeed: Prebiotic, Antimicrobial, Antioxidant and Immunomodulatory Benefits of Innovative Ingredients from Farming Systems

Microbiome changes in the sponge Halichondria panicea along the Baltic Sea salinity gradient

Bellamya purificata mitigate the impact of Pomacea canaliculata through gut microbial changes in rice-snail co-culture System

Genome-based characterization of AHPND and non-AHPND Vibrio campbellii isolates from Republic of Korea

Machine learning reveals microbial interactions driving plastic degradation across plastisphere environments

Determining biocide efficacy for treating established sulfate-reducing biofilms using flow cell systems

The plastisphere and river systems as reservoirs for antibiotic resistant bacteria

Single-cell RNA-seq reveals a key role for Vibrio cholerae Mak toxins in Tetrahymena pyriformis killing and bacterial survival

Consensus scoring-guided virtual screening identifies potent anti-saprolegniasis compounds targeting a P450 fusion protein

Prokaryotic community structure and auxin biosynthesis in early developmental stages of farmed Atlantic Nori (Porphyra spp.)