Frontiers in Microbiology | Microbe and Virus Interactions with Plants

Perspective

Published on 15 May 2025

Unleashing the potential of high-throughput sequencing for plant virus and viroid detection in Mexico

in Microbe and Virus Interactions with Plants

Carolina Pacheco-Dorantes
Juan Manuel Tovar-Pedraza
Daniel Leobardo Ochoa-Martínez
Ramiro González-Garza
Alfredo Diaz-Lara

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1603010

3,398 views
1 citation

Original Research

Published on 15 May 2025

An integrated transcriptomic and metabolomic analysis of black spot disease in Jinggang honey pomelo reveals underlying resistance mechanisms

in Microbe and Virus Interactions with Plants

Huimin Sun
Weiwei Li
Lin Lu
Biling Jin
Dingkun Liu
Zexia Li
Li He
Yang Wu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1495804

2,422 views
1 citation

Original Research

Published on 14 May 2025

Halophilic rhizobacteria promote growth, physiology and salinity tolerance in Sesamum indicum L. grown under salt stress

in Microbe and Virus Interactions with Plants

Dharman Sridhar
Saleh S. Alheswairini
Jayanthi Barasarathi
Hesham Ali El Enshasy
Sundaram Lalitha
Sajad Hussain Mir
S. Nithyapriya
Riyaz Sayyed

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1590854

4,168 views
11 citations

Original Research

Published on 14 May 2025

Enhancing growth and physiological traits in alfalfa by alleviating salt stress through biochar, hydrogel, and biofertilizer applications

in Microbe and Virus Interactions with Plants

Dilfuza Jabborova
Yu Zhang
Saleh S. Alhewairini
Zafarjon Jabbarov
Jayanthi Barasarathi
Tokhtasin Abdrakhmanov
Otamurod Imomov
Sokhibjon Abdusamatov
Baljeet Singh Saharan
Riyaz Sayyed

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1560762

3,804 views
8 citations

Original Research

Published on 13 May 2025

Microecological mechanisms of mountainous forest cultivated ginseng growth vigor and saponin accumulation, and the characterization of bionic microbial fertilizer

in Microbe and Virus Interactions with Plants

Fengyu Pang
Yugang Gao
Zhenqi Zhuang
Changju Li
Yan Zhao
Qun Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1548481

2,264 views
1 citation

Original Research

Published on 13 May 2025

Genomic and metabolomic insights into the biocontrol potential of Bacillus velezensis ZHR0 against sugarcane smut

in Microbe and Virus Interactions with Plants

Kaiyuan Pan
Jun Chen
Huojian Li
Shiqiang Xu
Jihua Wang
Xiaoni Yan
Yueying Zhao
Hongtao Jiang
Abdullah Khan
Muhammad Tahir Khan

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1582763

2,922 views
4 citations

Original Research

Published on 13 May 2025

Protein elicitor PeVn1 induces resistance to Botrytis cinerea in strawberry and differential transcriptomic analysis

in Microbe and Virus Interactions with Plants

Ziyu Zhang
Dong Wang
Yu Wang
Baozhu Dong
Jianxiu Hao
Hongyou Zhou

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1541448

2,030 views

Original Research

Published on 13 May 2025

Screening, molecular identification, and evaluation the effects of indigenous Plant Growth-Promoting Rhizobacteria on growth indices and nutrient uptake of chamomile (Matricaria chamomilla) under saline conditions

in Microbe and Virus Interactions with Plants

Seyed Hassan Tafaroji
Seyed Ali Abtahi
Mojtaba Jafarinia
Mehdi Ebadi

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1551310

3,206 views
3 citations

Original Research

Published on 09 May 2025

Unveiling the hidden allies of industrial chicory—a metagenomic exploration of rhizosphere microbiota and their impact on productivity and plant health

in Microbe and Virus Interactions with Plants

Lalie Leclercq
Sony Debarre
Emily Lloret
Bernard Taminiau
Georges Daube
Caroline Rambaud
Djamel Drider
Ali Siah
Bruno Desprez
Jean-Louis Hilbert

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1509094

2,092 views

Original Research

Published on 09 May 2025

Ralstonia solanacearum and Phytophthora parasitica promote the infection of each other by disturbing host defense response together

in Microbe and Virus Interactions with Plants

Xi Liu
Hancheng Wang
Mengru Wang
Yiting Li
Liuti Cai
Junliang Yin

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1581082

1,902 views
1 citation

Review

Published on 07 May 2025

Watermelon wilt disease: causes, harms, and control measures

in Microbe and Virus Interactions with Plants

Yaoyao Tong
Haosheng Du
Jie Xiao
Buchan Zhou
Xiaojun Zheng
Yangwu Deng
Xianqing Zheng
Ming Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1601130

4,408 views
4 citations

Original Research

Published on 02 May 2025

Rhizospheric Bacillus isolates control Fusarium wilt on cotton and enhance plant biomass and root development

in Microbe and Virus Interactions with Plants

Seema Aslam
Muhammad Baber
Tahir Naqqash
Muhammad Javed
Sandra Bredenbruch
Florian M. W. Grundler
A. Sylvia S. Schleker

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1580937

4,201 views

Original Research

Published on 01 May 2025

Sorghum-peanut intercropping under salt stress mediates rhizosphere microbial community shaping in sorghum by affecting soil sugar metabolism pathways

in Microbe and Virus Interactions with Plants

Xia Shao
Chunmei Yang
Yuxuan Chen
Chang Liu
Chunjuan Liu
Xiaolong Shi
Yufei Zhou

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1589415

3,081 views
2 citations

Original Research

Published on 01 May 2025

Synergistic effects of Trichoderma and biochar on the biocontrol of two soil-borne phytopathogens in chickpeas

in Microbe and Virus Interactions with Plants

Ranjna Kumari
Vipul Kumar
Bhupendra Koul
Mohammad Abul Farah
Awdhesh Kumar Mishra

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1583114

8,178 views
8 citations

Original Research

Published on 30 Apr 2025

The composite microbial agent controls tomato bacterial wilt by colonizing the root surface and regulating the rhizosphere soil microbial community

in Microbe and Virus Interactions with Plants

Shuangxi Zhu
Xiaojian Chang
Nana Liu
Yanhui He
Jianwen Wang
Zhansheng Wu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1559380

2,832 views
3 citations

Original Research

Published on 30 Apr 2025

2-Nonanol produced by Bacillus velezensis EM-1: a new biocontrol agent against tobacco brown spot

in Microbe and Virus Interactions with Plants

Xiaona Sui
Xiaobin Han
Xianbo Wang
Jun Wan
Mingxia Wen
Donglin Zhao
Yanfen Zheng
Chengsheng Zhang
Chuantao Xu
Youqiang Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1582372

1,989 views
1 citation

Original Research

Published on 30 Apr 2025

The role of soil chemical properties and microbial communities on Dendrocalamus brandisii bamboo shoot quality, Yunnan Province, China

in Microbe and Virus Interactions with Plants

Qian Chen
Jianjie Cao
Manyun Zhang
Lei Guo
Negar Omidvar
Zhihong Xu
Chaomao Hui
Weiyi Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1551638

2,068 views
5 citations

Original Research

Published on 29 Apr 2025

Beneficial soil microbiome profiles assembled using tetramycin to alleviate root rot disease in Panax notoginseng

in Microbe and Virus Interactions with Plants

Lianjin Liu
Zongqing Wang
Cheng Luo
Yinglong Deng
Wentao Wu
Yongping Jin
Yuxuan Wang
Hongping Huang
Zhaoxia Wei
Youyong Zhu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1571684

2,334 views
2 citations

Original Research

Published on 29 Apr 2025

Bacillus velezensis LMY3-5 for the biocontrol of soft rot in kiwifruit: antifungal action and underlying mechanisms

in Microbe and Virus Interactions with Plants

Chunguang Ren
Yu Liu
Wenwen Su
Bing Tian

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1562366

3,316 views
5 citations

Original Research

Published on 28 Apr 2025

Comparative analysis of the soil microbiome and carbohydrate content of Anthoxanthum nitens (Sweetgrass) and other Poaceae grass tissues and associated soils

in Microbe and Virus Interactions with Plants

Marissa L. King
Barinder Bajwa
Naomi Hanna
Xiaohui Xing
Kristin E. Low
Patrick Neuberger
Erin Hall
Michael Veltri
Brett Weighill
Leeann Klassen

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1384204

3,148 views

Original Research

Published on 28 Apr 2025

Often in silico, rarely in vivo: characterizing endemic plant-associated microbes for system-appropriate biofertilizers

in Microbe and Virus Interactions with Plants

Holly Hone
Tongda Li
Jatinder Kaur
Jennifer L. Wood
Timothy Sawbridge

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1568162

2,307 views
2 citations

Original Research

Published on 28 Apr 2025

Effects of biochar, dual inhibitor, and straw return on maize yield, soil physicochemical properties, and microbial system under fertilization conditions

in Microbe and Virus Interactions with Plants

Zhanbo Wei
Xiaori Han
Yonghuan Wang
Lili Zhang
Ping Gong
Yuanliang Shi

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1570237

2,154 views
2 citations

Original Research

Published on 28 Apr 2025

Thrips and plant viruses: a comprehensive virome analysis in tropical agriculture

in Microbe and Virus Interactions with Plants

Qikai Zhang
Chunxi Cheng
Baoqian Lyu
Yulin Gao
Lilin Chen
Liang Peng
Zhengfu Yue
Hui Lu
Jihong Tang
Bin Jiao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1540883

2,929 views
2 citations

Original Research

Published on 28 Apr 2025

Changes in the diversity of ginseng endophyte flora driven by Fusarium solani

in Microbe and Virus Interactions with Plants

Zhuo Sun
Yang Hu
Yi-Xin Yang
Meng-Yuan Lei
Zhong-Ming Han
Lin Cheng
Wan Wang
Mei Han
Ze-Liang Lyu
Li-Min Yang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1554706

1,991 views
3 citations

1,789 articles

articles

Unleashing the potential of high-throughput sequencing for plant virus and viroid detection in Mexico

An integrated transcriptomic and metabolomic analysis of black spot disease in Jinggang honey pomelo reveals underlying resistance mechanisms

Halophilic rhizobacteria promote growth, physiology and salinity tolerance in Sesamum indicum L. grown under salt stress

Enhancing growth and physiological traits in alfalfa by alleviating salt stress through biochar, hydrogel, and biofertilizer applications

Microecological mechanisms of mountainous forest cultivated ginseng growth vigor and saponin accumulation, and the characterization of bionic microbial fertilizer

Genomic and metabolomic insights into the biocontrol potential of Bacillus velezensis ZHR0 against sugarcane smut

Protein elicitor PeVn1 induces resistance to Botrytis cinerea in strawberry and differential transcriptomic analysis

Screening, molecular identification, and evaluation the effects of indigenous Plant Growth-Promoting Rhizobacteria on growth indices and nutrient uptake of chamomile (Matricaria chamomilla) under saline conditions

Unveiling the hidden allies of industrial chicory—a metagenomic exploration of rhizosphere microbiota and their impact on productivity and plant health

Ralstonia solanacearum and Phytophthora parasitica promote the infection of each other by disturbing host defense response together

Watermelon wilt disease: causes, harms, and control measures

Rhizospheric Bacillus isolates control Fusarium wilt on cotton and enhance plant biomass and root development

Sorghum-peanut intercropping under salt stress mediates rhizosphere microbial community shaping in sorghum by affecting soil sugar metabolism pathways

Synergistic effects of Trichoderma and biochar on the biocontrol of two soil-borne phytopathogens in chickpeas

The composite microbial agent controls tomato bacterial wilt by colonizing the root surface and regulating the rhizosphere soil microbial community

2-Nonanol produced by Bacillus velezensis EM-1: a new biocontrol agent against tobacco brown spot

The role of soil chemical properties and microbial communities on Dendrocalamus brandisii bamboo shoot quality, Yunnan Province, China

Beneficial soil microbiome profiles assembled using tetramycin to alleviate root rot disease in Panax notoginseng

Bacillus velezensis LMY3-5 for the biocontrol of soft rot in kiwifruit: antifungal action and underlying mechanisms

Comparative analysis of the soil microbiome and carbohydrate content of Anthoxanthum nitens (Sweetgrass) and other Poaceae grass tissues and associated soils

Often in silico, rarely in vivo: characterizing endemic plant-associated microbes for system-appropriate biofertilizers

Effects of biochar, dual inhibitor, and straw return on maize yield, soil physicochemical properties, and microbial system under fertilization conditions

Thrips and plant viruses: a comprehensive virome analysis in tropical agriculture

Changes in the diversity of ginseng endophyte flora driven by Fusarium solani