Frontiers in Microbiology | Microbial Physiology and Metabolism

Original Research

Accepted on 13 Aug 2025

From Indigenous Screening to Pilot Fermentation: Comprehensive Characterization of Bacillus subtilis YZ01 as a Novel Food-Grade Probiotic Candidate

in Microbial Physiology and Metabolism

Xiaoyu Cao
Yu Zhang
Qianqian Xu
Hai Yan

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1624208

151 views

Original Research

Accepted on 11 Aug 2025

Combined transcriptome and metabolome analysis reveals the regulatory network of histidine kinase QseC in the two-component system of Glaesserella parasuis

in Microbial Physiology and Metabolism

Xuefeng Yan
Yuhong Zhou
Songwei Liu
Congwei Gu
Wudian Xiao
Mingde Zhao
Zehui Yu
Lvqin He

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1637383

Original Research

Accepted on 11 Aug 2025

cAMP-CRP-activated E. coli causes growth arrest under stress conditions

in Microbial Physiology and Metabolism

Most Farzana Haque
Takefusa Tarusawa
Chisato Ushida
Shion Ito
Hyouta Himeno

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1597530

107 views

Original Research

Accepted on 08 Aug 2025

Multi-omics investigation reveals unique markers in Klebsiella pneumoniae compared to closely related species Authors & Affiliations

in Microbial Physiology and Metabolism

Lena-Sophie Swiatek
Kristin Surmann
Elias Eger
Justus Ursus Müller
Manuela Gesell Salazar
Stefan E Heiden
Guido Werner
Nils-Olaf Hübner
Jürgen A Bohnert
Karsten Becker

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1657680

270 views

Original Research

Accepted on 07 Aug 2025

Gene expression dynamics in Bacillus cereus and Bacillus subtilis treated with Thymus vulgaris and Origanum vulgare subsp. hirtum essential oils

in Microbial Physiology and Metabolism

Fabrizio Anniballi
Purgatorio Chiara
Annalisa Serio
CONCETTA Scalfaro
Silvia Taglieri
Antonello Paparella

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1643608

107 views

Correction

Accepted on 07 Aug 2025

Evaluation of protein extraction methodologies on bacterial proteomic profiling: a comparative analysis

in Microbial Physiology and Metabolism

Hongning Jiang
Aiyun Han
Yangdong Zhang
Yanxin Li
Chao Jiang
Qijing Du
Rongbo Fan
Yongxin Yang
Rongwei Han

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1673697

218 views

Original Research

Accepted on 04 Aug 2025

Unraveling the Molecular Mechanisms of Inonotus hispidus Fruiting Body Formation through Multi-Omics Integration

in Microbial Physiology and Metabolism

Xiaoying MA
Jun Xiao
Na Gong
Ying Zhao
Xun Chen
Guoli Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1624253

171 views

Original Research

Published on 01 Aug 2025

Multi-omics analysis of Taiwanofungus gaoligongensis: effects of different cultivation methods on secondary metabolites

in Microbial Physiology and Metabolism

Tingwen He
Xiaolong Yuan
Liangjun Xiao
Tanggeran Hu
Yi Wang
Xiaolei Zhao
Lu Li
Chengbo Peng
Hongling Zhang
Yuan Zheng

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1620693

1,175 views

Original Research

Accepted on 29 Jul 2025

Phosphite inhibits Phytophthora cinnamomi by downregulating oxidoreductases and disrupting energy metabolism

in Microbial Physiology and Metabolism

Sreedhara Ashok Prabhu
Pravin Naicker
Tuan A Dong
Ireshyn Selvan Govender
Juanita Engelbrecht
Robert Backer
Stoyan Hristov Stoychev
Noelani Van Den Berg

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1632726

189 views

Original Research

Published on 17 Jul 2025

Pseudomonas aeruginosa-derived extracellular vesicles enhance macrophage aerobic glycolysis that fuels inflammation

in Microbial Physiology and Metabolism

Chun Li
Jing Peng
Lihua Xiao
Haiying Wu
Jing Chen
Nian Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1619101

1,239 views

Original Research

Published on 17 Jul 2025

Evaluation of protein extraction methodologies on bacterial proteomic profiling: a comparative analysis

in Microbial Physiology and Metabolism

Hongning Jiang
Aiyun Han
Yangdong Zhang
Yanxin Li
Chao Jiang
Qijing Du
Rongbo Fan
Yongxin Yang
Rongwei Han

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1586662

1,164 views

Opinion

Published on 16 Jul 2025

Genetic improvement of a synthetic microbiota: a step further?

in Microbial Physiology and Metabolism

Marcel Martínez-Porchas
Diana Medina-Félix
Francisco Vargas-Albores
Estefanía Garibay-Valdez
Yuniel Méndez-Martínez
Luis Rafael Martínez-Córdova
Angel Martin Ortiz-Estrada

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1619874

1,690 views

Original Research

Published on 14 Jul 2025

Identification of a preferred DNA binding sequence and novel regulon member for CadR in Pseudomonas aeruginosa PAO1

in Microbial Physiology and Metabolism

John K. Barrows
Ross M. Wood
Alaina B. Westee
Kamya A. Stubbs
Melanie Ratliff-Griffin
Michael W. Van Dyke

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1608957

1,537 views

Correction

Published on 02 Jul 2025

Correction: Green microalga Chromochloris zofingiensis conserves substrate uptake pattern but changes their metabolic uses across trophic transition

in Microbial Physiology and Metabolism

Yuntao Hu
Nakian Kim
Melissa S. Roth
Katherine B. Louie
Suzanne M. Kosina
Shivani Upadhyaya
Tim L. Jeffers
Jacob S. Jordan
Benjamin P. Bowen
Krishna K. Niyogi

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1641452

700 views

Original Research

Published on 30 Jun 2025

Research on nitrogen transformation pathways of a thermophilic heterotrophic nitrifying bacterial consortium GW7

in Microbial Physiology and Metabolism

Yongqi Ma
Jiali Wang
Yindi Zhang
Wenping Guan
Wenrui Qi
Xisheng Tai
Dong Lin
Rong He
Likun Sun
Aiwen Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1578865

1,067 views

Original Research

Published on 25 Jun 2025

Reactive oxygen species mediate bioeffects of static magnetic field via impairment of long-chain fatty acid degradation in Escherichia coli

in Microbial Physiology and Metabolism

Haodong Li
Yanwen Fang
Jirong Huang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1586233

1,012 views