Frontiers in Microbiology | Microbial Physiology and Metabolism

Original Research

Published on 15 May 2024

Untargeted metabolomics coupled with genomics in the study of sucrose and xylose metabolism in Pectobacterium betavasculorum

in Microbial Physiology and Metabolism

Magdalena Smoktunowicz
Renata Wawrzyniak
Joanna Jonca
Małgorzata Waleron
Krzysztof Waleron

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1323765

2,560 views
1 citation

Original Research

Published on 13 May 2024

Transcriptomic and metabolomic correlation analysis: effect of initial SO2 addition on higher alcohol synthesis in Saccharomyces cerevisiae and identification of key regulatory genes

in Microbial Physiology and Metabolism

Yuan Lin
Na Zhang
Yonghong Lin
Yinhao Gao
Hongxing Li
Cuixia Zhou
Wu Meng
Weishuai Qin

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1394880

3,168 views
6 citations

Original Research

Published on 09 May 2024

Characterization of Bacillus velezensis TJS119 and its biocontrol potential against insect pathogens

in Microbial Physiology and Metabolism

Kook-Il Han
Young Ho Nam
Byung Su Hwang
Jeong Tae Kim
Jum Oc Jung
Eunsun Kim
Mi-Hwa Lee

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1361961

2,885 views
5 citations

Original Research

Published on 09 May 2024

Exploring potential polysaccharide utilization loci involved in the degradation of typical marine seaweed polysaccharides by Bacteroides thetaiotaomicron

in Microbial Physiology and Metabolism

Biao Yu
Zheng Lu
Saiyi Zhong
Kit-Leong Cheong

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1332105

6,480 views
9 citations

Review

Published on 06 May 2024

Rippling life on a dormant planet: hibernation of ribosomes, RNA polymerases, and other essential enzymes

in Microbial Physiology and Metabolism

Karla Helena-Bueno
Lewis I. Chan
Sergey V. Melnikov

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1386179

7,817 views
12 citations

Original Research

Published on 29 Apr 2024

Function of the RNA-targeting class 2 type VI CRISPR Cas system of Rhodobacter capsulatus

in Microbial Physiology and Metabolism

Jonas Kretz
Janek Börner
Tobias Friedrich
Matthew McIntosh
Tara Procida-Kowalski
Florian Gerken
Jochen Wilhelm
Gabriele Klug

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1384543

2,535 views
1 citation

Original Research

Published on 29 Apr 2024

Reactive oxygen species derived from NADPH oxidase as signaling molecules regulate fatty acids and astaxanthin accumulation in Chromochloris zofingiensis

in Microbial Physiology and Metabolism

Yi Yuan
Tiantian Zhao
Weizheng Gao
Wenqi Ye
Yuling Chen
Dongzhe Sun
Zhao Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1387222

3,980 views
10 citations

Original Research

Published on 24 Apr 2024

SpoIVA is an essential morphogenetic protein for the formation of heat- and lysozyme-resistant spores in Clostridium sporogenes NBRC 14293

in Microbial Physiology and Metabolism

Ritsuko Kuwana
Bruno Dupuy
Isabelle Martin-Verstraete
Hiromu Takamatsu

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1338751

4,572 views
2 citations

Original Research

Published on 22 Apr 2024

Optimization of the fermentation media and growth conditions of Bacillus velezensis BHZ-29 using a Plackett–Burman design experiment combined with response surface methodology

in Microbial Physiology and Metabolism

YingWu Shi
XinXiang Niu
HongMei Yang
Ming Chu
Ning Wang
HuiFang Bao
FaQiang Zhan
Rong Yang
Kai Lou

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1355369

10,215 views
13 citations

Original Research

Published on 18 Apr 2024

Classical and novel properties of Holliday junction resolvase SynRuvC from Synechocystis sp. PCC6803

in Microbial Physiology and Metabolism

Yanchao Gu
Yantao Yang
Chunhua Kou
Ying Peng
Wenguang Yang
Jiayu Zhang
Han Jin
Xiaoru Han
Yao Wang
Xihui Shen

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1362880

3,544 views
2 citations

Original Research

Published on 18 Apr 2024

NmrB (AN9181) expression is activated under oxidative stress conditions acting as a metabolic repressor of Aspergillus nidulans

in Microbial Physiology and Metabolism

João M. P. Jorge
Celso Martins
Patrícia Domingos
Tiago M. Martins
Diego O. Hartmann
Gustavo H. Goldman
Cristina Silva Pereira

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1373469

2,625 views
2 citations

Original Research

Published on 15 Apr 2024

Potato glycoside alkaloids exhibit antifungal activity by regulating the tricarboxylic acid cycle pathway of Fusarium solani

in Microbial Physiology and Metabolism

Chongqing Zhang
Wei Chen
Bin Wang
Yupeng Wang
Nan Li
Ruiyun Li
Yuke Yan
Yuyan Sun
Jing He

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1390269

3,683 views
13 citations

Original Research

Published on 05 Apr 2024

Whole-genome sequencing of Sphingobium baderi SC-1 and identification of a crucial 3-phenoxybenzoic acid-degrading gene

in Microbial Physiology and Metabolism

Qin Li
Qiao Zhou
Yuan Chen
Kaidi Hu
Montserrat Sarrà
Jianlong Li
Aiping Liu
Likou Zou
Shuliang Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1361335

2,247 views
4 citations

Original Research

Published on 04 Apr 2024

Regulation of quorum sensing activities by the stringent response gene rsh in sphingomonads is species-specific and culture condition dependent

in Microbial Physiology and Metabolism

Yue Xiao
Xin Chen
Hang Lu
Tingting Jiang
Yichun Wang
Luyi Liang
Sergey Dobretsov
Yili Huang

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1368499

2,526 views
1 citation

Correction

Published on 04 Apr 2024

Corrigendum: Atypical carboxysome loci: JEEPs or junk?

in Microbial Physiology and Metabolism

USF Genomics Class 2020
USF Genomics Class 2021
Markus Sutter
Cheryl A. Kerfeld
Kathleen M. Scott

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1393362

1,081 views

Original Research

Published on 04 Apr 2024

The DmsABC S-oxide reductase is an essential component of a novel, hypochlorite-inducible system of extracellular stress defense in Haemophilus influenzae

in Microbial Physiology and Metabolism

Marufa Nasreen
Daniel Ellis
Jennifer Hosmer
Ama-Tawiah Essilfie
Emmanuelle Fantino
Peter Sly
Alastair G. McEwan
Ulrike Kappler

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1359513

5,018 views
6 citations

Original Research

Published on 02 Apr 2024

Genome-based approach to evaluate the metabolic potentials and exopolysaccharides production of Bacillus paralicheniformis CamBx3 isolated from a Chilean hot spring

in Microbial Physiology and Metabolism

Manik Prabhu Narsing Rao
Ram Nageena Singh
Rajesh K. Sani
Aparna Banerjee

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1377965

3,449 views
5 citations

Perspective

Published on 28 Mar 2024

DNA damage response and cell cycle regulation in bacteria: a twist around the paradigm

in Microbial Physiology and Metabolism

Hari Sharan Misra
Yogendra Singh Rajpurohit

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1389074

3,814 views
7 citations

Original Research

Published on 28 Mar 2024

Optimization of flavanonols heterologous biosynthesis in Streptomyces albidoflavus, and generation of auronols

in Microbial Physiology and Metabolism

Patricia Magadán-Corpas
Suhui Ye
Annett Braune
Claudio J. Villar
Felipe Lombó

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1378235

3,951 views
3 citations

Original Research

Published on 27 Mar 2024

Methionyl-tRNA synthetase synthetic and proofreading activities are determinants of antibiotic persistence

in Microbial Physiology and Metabolism

Whitney N. Wood
Miguel Angel Rubio
Lorenzo Eugenio Leiva
Gregory J. Phillips
Michael Ibba

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1384552

3,288 views
3 citations

Original Research

Published on 26 Mar 2024

Genomic and biological control of Sclerotinia sclerotiorum using an extracellular extract from Bacillus velezensis 20507

in Microbial Physiology and Metabolism

Yunqing Cheng
Hanxiao Lou
Hongli He
Xinyi He
Zicheng Wang
Xin Gao
Jianfeng Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1385067

2,927 views
5 citations

Original Research

Published on 25 Mar 2024

Enterococcus casseliflavus regulates amino acid metabolism in edible insect Clanis bilineata tsingtauica: a functional metagenomics study

in Microbial Physiology and Metabolism

Lei Qian
Yanhui Wang
Pan Deng
Jia Zhang
Yi Qin
Zongnan Li
Huaijian Liao
Fajun Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1343265

3,176 views
8 citations

Original Research

Published on 25 Mar 2024

The PII protein interacts with the Amt ammonium transport and modulates nitrate/nitrite assimilation in mycobacteria

in Microbial Physiology and Metabolism

Delfina Ensinck
Edileusa C. M. Gerhardt
Lara Rollan
Luciano F. Huergo
Hugo Gramajo
Lautaro Diacovich

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1366111

3,507 views
7 citations

Original Research

Published on 22 Mar 2024

Bifidobacterium longum suppresses colorectal cancer through the modulation of intestinal microbes and immune function

in Microbial Physiology and Metabolism

Fangjian Shang
Xia Jiang
Haobo Wang
Shang Guo
Shuo Kang
Bin Xu
Xin Wang
Shihao Chen
Ning Li
Bo Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1327464

7,554 views
23 citations

2,809 articles

articles

Untargeted metabolomics coupled with genomics in the study of sucrose and xylose metabolism in Pectobacterium betavasculorum

Transcriptomic and metabolomic correlation analysis: effect of initial SO2 addition on higher alcohol synthesis in Saccharomyces cerevisiae and identification of key regulatory genes

Characterization of Bacillus velezensis TJS119 and its biocontrol potential against insect pathogens

Exploring potential polysaccharide utilization loci involved in the degradation of typical marine seaweed polysaccharides by Bacteroides thetaiotaomicron

Rippling life on a dormant planet: hibernation of ribosomes, RNA polymerases, and other essential enzymes

Function of the RNA-targeting class 2 type VI CRISPR Cas system of Rhodobacter capsulatus

Reactive oxygen species derived from NADPH oxidase as signaling molecules regulate fatty acids and astaxanthin accumulation in Chromochloris zofingiensis

SpoIVA is an essential morphogenetic protein for the formation of heat- and lysozyme-resistant spores in Clostridium sporogenes NBRC 14293

Optimization of the fermentation media and growth conditions of Bacillus velezensis BHZ-29 using a Plackett–Burman design experiment combined with response surface methodology

Classical and novel properties of Holliday junction resolvase SynRuvC from Synechocystis sp. PCC6803

NmrB (AN9181) expression is activated under oxidative stress conditions acting as a metabolic repressor of Aspergillus nidulans

Potato glycoside alkaloids exhibit antifungal activity by regulating the tricarboxylic acid cycle pathway of Fusarium solani

Whole-genome sequencing of Sphingobium baderi SC-1 and identification of a crucial 3-phenoxybenzoic acid-degrading gene

Regulation of quorum sensing activities by the stringent response gene rsh in sphingomonads is species-specific and culture condition dependent

Corrigendum: Atypical carboxysome loci: JEEPs or junk?

The DmsABC S-oxide reductase is an essential component of a novel, hypochlorite-inducible system of extracellular stress defense in Haemophilus influenzae

Genome-based approach to evaluate the metabolic potentials and exopolysaccharides production of Bacillus paralicheniformis CamBx3 isolated from a Chilean hot spring

DNA damage response and cell cycle regulation in bacteria: a twist around the paradigm

Optimization of flavanonols heterologous biosynthesis in Streptomyces albidoflavus, and generation of auronols

Methionyl-tRNA synthetase synthetic and proofreading activities are determinants of antibiotic persistence

Genomic and biological control of Sclerotinia sclerotiorum using an extracellular extract from Bacillus velezensis 20507

Enterococcus casseliflavus regulates amino acid metabolism in edible insect Clanis bilineata tsingtauica: a functional metagenomics study

The PII protein interacts with the Amt ammonium transport and modulates nitrate/nitrite assimilation in mycobacteria

Bifidobacterium longum suppresses colorectal cancer through the modulation of intestinal microbes and immune function