Frontiers in Microbiology | Microbial Physiology and Metabolism

Original Research

Published on 15 Feb 2024

Genomic and ecological approaches to identify the Bifidobacterium breve prototype of the healthy human gut microbiota

in Microbial Physiology and Metabolism

Chiara Argentini
Gabriele Andrea Lugli
Chiara Tarracchini
Federico Fontana
Leonardo Mancabelli
Alice Viappiani
Rosaria Anzalone
Leonora Angelini
Giulia Alessandri
Giulia Longhi

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1349391

3,492 views
8 citations

Original Research

Published on 14 Feb 2024

Agrobacteria deploy two classes of His-Me finger superfamily nuclease effectors exerting different antibacterial capacities against specific bacterial competitors

in Microbial Physiology and Metabolism

Mary Nia M. Santos
Katherine L. Pintor
Pei-Yu Hsieh
Yee-Wai Cheung
Li-Kang Sung
Yu-Ling Shih
Erh-Min Lai

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1351590

3,282 views
2 citations

Original Research

Published on 08 Feb 2024

Insights into additional lactone-based signaling circuits in Streptomyces: existence of acyl-homoserine lactones and LuxI/LuxR homologs in six Streptomyces species

in Microbial Physiology and Metabolism

Amir Salehi-Najafabadi
Sepand Tehrani Fateh
Ghasem Amoabediny
Javad Hamedi

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1342637

3,314 views
4 citations

Original Research

Published on 07 Feb 2024

The blue light-dependent LOV-protein LdaP of Dinoroseobacter shibae acts as antirepressor of the PpsR repressor, regulating photosynthetic gene cluster expression

in Microbial Physiology and Metabolism

Saskia Pucelik
Miriam Becker
Steffi Heyber
Lars Wöhlbrand
Ralf Rabus
Dieter Jahn
Elisabeth Härtig

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1351297

4,382 views
3 citations

Original Research

Published on 07 Feb 2024

Bacterial cytochrome P450s: a bioinformatics odyssey of substrate discovery

in Microbial Physiology and Metabolism

Gustavo Schottlender
Juan Manuel Prieto
Camila Clemente
Claudio David Schuster
Victoria Dumas
Darío Fernández Do Porto
Marcelo Adrian Martí

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1343029

5,111 views
5 citations

Original Research

Published on 01 Feb 2024

Genome-wide transcriptome profiling reveals molecular response pathways of Trichoderma harzianum in response to salt stress

in Microbial Physiology and Metabolism

Qihong Yang
Zhenchuan Mao
Yali Hao
Shijie Zheng
Jianlong Zhao
Yan Li
Yuhong Yang
Bingyan Xie
Jian Ling
Yanlin Li

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1342584

3,890 views
1 citation

Original Research

Published on 31 Jan 2024

Transcriptional regulation of cellobiose utilization by PRD-domain containing Sigma54-dependent transcriptional activator (CelR) and catabolite control protein A (CcpA) in Bacillus thuringiensis

in Microbial Physiology and Metabolism

Liangwei Zhang
Hong Xu
Haijian Cheng
Fuping Song
Jie Zhang
Qi Peng

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1160472

3,034 views
2 citations

Original Research

Published on 29 Jan 2024

Isolation and in vitro assessment of chicken gut microbes for probiotic potential

in Microbial Physiology and Metabolism

Fatima Shahbaz
Fatima Muccee
Aansa Shahab
Sher Zaman Safi
Suliman Yousef Alomar
Abdul Qadeer

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1278439

7,410 views
10 citations

Original Research

Published on 25 Jan 2024

Role of extracellular matrix components in biofilm formation and adaptation of Pseudomonas ogarae F113 to the rhizosphere environment

in Microbial Physiology and Metabolism

Esther Blanco-Romero
Daniel Garrido-Sanz
David Durán
Morten Rybtke
Tim Tolker-Nielsen
Miguel Redondo-Nieto
Rafael Rivilla
Marta Martín

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1341728

5,029 views
10 citations

Original Research

Published on 25 Jan 2024

Inactivation of antibiotic-resistant bacteria Escherichia coli by electroporation

in Microbial Physiology and Metabolism

Saša Haberl Meglič
Dejan Slokar
Damijan Miklavčič

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1347000

4,034 views
4 citations

Original Research

Published on 24 Jan 2024

Metabolic perturbation of Streptomyces albulus by introducing NADP-dependent glyceraldehyde 3-phosphate dehydrogenase

in Microbial Physiology and Metabolism

Jiaqi Mao
Min Zhang
Wenjuan Dai
Chenghao Fu
Zhanzhan Wang
Xiuwen Wang
Qingshou Yao
Linghui Kong
Jiayang Qin

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1328321

2,557 views
4 citations

Mini Review

Published on 24 Jan 2024

Myxococcus xanthus predation: an updated overview

in Microbial Physiology and Metabolism

Francisco Javier Contreras-Moreno
Juana Pérez
José Muñoz-Dorado
Aurelio Moraleda-Muñoz
Francisco Javier Marcos-Torres

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1339696

11,479 views
23 citations

Original Research

Published on 18 Jan 2024

Characterization of MdpS: an in-depth analysis of a MUC5B-degrading protease from Streptococcus oralis

in Microbial Physiology and Metabolism

Fredrik Leo
Rolf Lood
Kristina A. Thomsson
Jonas Nilsson
Gunnel Svensäter
Claes Wickström

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1340109

3,728 views
1 citation

Original Research

Published on 16 Jan 2024

Insights into group-specific pattern of secondary metabolite gene cluster in Burkholderia genus

in Microbial Physiology and Metabolism

Byeollee Kim
So-Ra Han
Hyun Lee
Tae-Jin Oh

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1302236

5,655 views
4 citations

Review

Published on 11 Jan 2024

Key enzymes involved in the utilization of fatty acids by Saccharomyces cerevisiae: a review

in Microbial Physiology and Metabolism

Zhaoyun Wang
Chunli Su
Yisang Zhang
Sifan Shangguan
Ruiming Wang
Jing Su

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1294182

13,683 views
16 citations

Editorial

Published on 11 Jan 2024

Editorial: Chromosome architecture and DNA topology in prokaryotes

in Microbial Physiology and Metabolism

Tamara Basta
Estelle Crozat
Ian Grainge

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1355036

2,091 views

Editorial

Published on 08 Jan 2024

Editorial: Morels: physiology, genetics, and interactions with the environment

in Microbial Physiology and Metabolism

Hao Tan
Xi-Hui Du
Gregory Bonito
Segula Masaphy

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1352719

2,374 views
2 citations

Original Research

Published on 08 Jan 2024

Optimized recombinant production of the bacteriocin garvicin Q by Corynebacterium glutamicum

in Microbial Physiology and Metabolism

Christian K. Desiderato
Carolin Müller
Alexander Schretzmeier
Katharina M. Hasenauer
Bruno Gnannt
Bastian Süpple
Alexander Reiter
Valentin Steier
Marco Oldiges
Bernhard J. Eikmanns

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1254882

4,389 views
10 citations

Original Research

Published on 08 Jan 2024

Subtractive modification of bacterial consortium using antisense peptide nucleic acids

in Microbial Physiology and Metabolism

Tatsuya Hizume
Yu Sato
Hiroaki Iwaki
Kohsuke Honda
Kenji Okano

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1321428

3,506 views
4 citations

Original Research

Published on 08 Jan 2024

The quorum sensing peptide BlpC regulates the transcription of genes outside its associated gene cluster and impacts the growth of Streptococcus thermophilus

in Microbial Physiology and Metabolism

Michael J. McAnulty
Giselle K. Guron
Adam M. Oest
Amanda L. Miller
John A. Renye

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1304136

3,495 views
7 citations

Review

Published on 08 Jan 2024

Active substances of myxobacteria against plant diseases and their action mechanisms

in Microbial Physiology and Metabolism

Lele Zhang
Liangliang Bao
Songyuan Li
Yang Liu
Huirong Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1294854

5,029 views
9 citations

Original Research

Published on 08 Jan 2024

Mathematical modeling of mechanosensitive reversal control in Myxococcus xanthus

in Microbial Physiology and Metabolism

Yirui Chen
Elias J. Topo
Beiyan Nan
Jing Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1294631

3,687 views
4 citations

Editorial

Published on 05 Jan 2024

Editorial: Functional insights into the probiotic mechanisms of surface protein action

in Microbial Physiology and Metabolism

Jai K. Kaushik
Vengadesan Krishnan
Ingemar von Ossowski

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1355529

1,746 views

Original Research

Published on 04 Jan 2024

Experimental promoter identification of a foodborne pathogen Salmonella enterica subsp. enterica serovar Typhimurium with near single base-pair resolution

in Microbial Physiology and Metabolism

Sang-Mok Lee
Hoa Thi Le
Assiya Taizhanova
Linh Khanh Nong
Joon Young Park
Eun-Jin Lee
Bernhard O. Palsson
Donghyuk Kim

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1271121

3,696 views
5 citations

2,809 articles

articles

Genomic and ecological approaches to identify the Bifidobacterium breve prototype of the healthy human gut microbiota

Agrobacteria deploy two classes of His-Me finger superfamily nuclease effectors exerting different antibacterial capacities against specific bacterial competitors

Insights into additional lactone-based signaling circuits in Streptomyces: existence of acyl-homoserine lactones and LuxI/LuxR homologs in six Streptomyces species

The blue light-dependent LOV-protein LdaP of Dinoroseobacter shibae acts as antirepressor of the PpsR repressor, regulating photosynthetic gene cluster expression

Bacterial cytochrome P450s: a bioinformatics odyssey of substrate discovery

Genome-wide transcriptome profiling reveals molecular response pathways of Trichoderma harzianum in response to salt stress

Transcriptional regulation of cellobiose utilization by PRD-domain containing Sigma54-dependent transcriptional activator (CelR) and catabolite control protein A (CcpA) in Bacillus thuringiensis

Isolation and in vitro assessment of chicken gut microbes for probiotic potential

Role of extracellular matrix components in biofilm formation and adaptation of Pseudomonas ogarae F113 to the rhizosphere environment

Inactivation of antibiotic-resistant bacteria Escherichia coli by electroporation

Metabolic perturbation of Streptomyces albulus by introducing NADP-dependent glyceraldehyde 3-phosphate dehydrogenase

Myxococcus xanthus predation: an updated overview

Characterization of MdpS: an in-depth analysis of a MUC5B-degrading protease from Streptococcus oralis

Insights into group-specific pattern of secondary metabolite gene cluster in Burkholderia genus

Key enzymes involved in the utilization of fatty acids by Saccharomyces cerevisiae: a review

Editorial: Chromosome architecture and DNA topology in prokaryotes

Editorial: Morels: physiology, genetics, and interactions with the environment

Optimized recombinant production of the bacteriocin garvicin Q by Corynebacterium glutamicum

Subtractive modification of bacterial consortium using antisense peptide nucleic acids

The quorum sensing peptide BlpC regulates the transcription of genes outside its associated gene cluster and impacts the growth of Streptococcus thermophilus

Active substances of myxobacteria against plant diseases and their action mechanisms

Mathematical modeling of mechanosensitive reversal control in Myxococcus xanthus

Editorial: Functional insights into the probiotic mechanisms of surface protein action

Experimental promoter identification of a foodborne pathogen Salmonella enterica subsp. enterica serovar Typhimurium with near single base-pair resolution