Frontiers in Microbiology | Microbial Physiology and Metabolism

Review

Published on 02 Sep 2025

Beyond pathogenicity: applications of the type III secretion system (T3SS) of Pseudomonas aeruginosa

in Microbial Physiology and Metabolism

Tianqi Su
Lin Zhang
Jie Shen
Danyu Qian
Yulei Guo
Zhenpeng Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1663945

4,049 views
1 citation

Correction

Published on 01 Sep 2025

Correction: Evaluation of protein extraction methodologies on bacterial proteomic profiling: a comparative analysis

in Microbial Physiology and Metabolism

Hongning Jiang
Aiyun Han
Yangdong Zhang
Yanxin Li
Chao Jiang
Qijing Du
Rongbo Fan
Yongxin Yang
Rongwei Han

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1673697

1,434 views

Original Research

Published on 01 Sep 2025

Impairment in global protein synthesis uncouples UPR gene induction from HAC1 mRNA splicing in Saccharomyces cerevisiae

in Microbial Physiology and Metabolism

Ralph Allen Capistrano Geronimo
Yuki Ishiwata-Kimata
Yutaka Funahashi
Shingo Izawa
Yukio Kimata

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1629132

2,361 views
1 citation

Original Research

Published on 29 Aug 2025

Combined transcriptome and metabolome analysis reveals the regulatory network of histidine kinase QseC in the two-component system of Glaesserella parasuis

in Microbial Physiology and Metabolism

Xuefeng Yan
Yuhong Zhou
Songwei Liu
Congwei Gu
Wudian Xiao
Mingde Zhao
Zehui Yu
Lvqin He

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1637383

1,491 views
1 citation

Original Research

Published on 29 Aug 2025

From indigenous screening to pilot fermentation: comprehensive characterization of Bacillus subtilis YZ01 as a novel food-grade probiotic candidate

in Microbial Physiology and Metabolism

Xiaoyu Cao
Yu Zhang
Qianqian Xu
Hai Yan

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1624208

2,807 views

Original Research

Published on 29 Aug 2025

cAMP-CRP-activated E. coli causes growth arrest under stress conditions

in Microbial Physiology and Metabolism

Most Farzana Haque
Takefusa Tarusawa
Chisato Ushida
Shion Ito
Hyouta Himeno

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1597530

2,349 views
1 citation

Original Research

Published on 25 Aug 2025

Phosphite inhibits Phytophthora cinnamomi by downregulating oxidoreductases and disrupting energy metabolism

in Microbial Physiology and Metabolism

S. Ashok Prabhu
Previn Naicker
Tuan A. Duong
Ireshyn Selvan Govender
Juanita Engelbrecht
Robert Backer
Stoyan Hristov Stoychev
Noëlani van den Berg

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1632726

2,773 views

Original Research

Published on 22 Aug 2025

Gene expression dynamics in Bacillus cereus and Bacillus subtilis treated with Thymus vulgaris and Origanum vulgare subsp. hirtum essential oils

in Microbial Physiology and Metabolism

Fabrizio Anniballi
Chiara Purgatorio
Annalisa Serio
Concetta Scalfaro
Silvia Taglieri
Antonello Paparella

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1643608

2,264 views

Original Research

Published on 20 Aug 2025

Multi-omics investigation reveals unique markers in Klebsiella pneumoniae compared to closely related species

in Microbial Physiology and Metabolism

Lena-Sophie Swiatek
Kristin Surmann
Elias Eger
Justus U. Müller
Manuela Gesell Salazar
Stefan E. Heiden
Guido Werner
Nils-Olaf Hübner
Jürgen A. Bohnert
Karsten Becker

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1657680

3,854 views
1 citation

Original Research

Published on 19 Aug 2025

Identification of the malonylation modification in Staphylococcus aureus and insight into the regulators in biofilm formation

in Microbial Physiology and Metabolism

Xiaoyan Yu
Yi Li
Tingting Yang
Wenjie Li
Xiaozhu Dong
Aixiang Huang
Yanan Shi

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1598098

2,144 views

Original Research

Published on 01 Aug 2025

Multi-omics analysis of Taiwanofungus gaoligongensis: effects of different cultivation methods on secondary metabolites

in Microbial Physiology and Metabolism

Tingwen He
Xiaolong Yuan
Liangjun Xiao
Tanggeran Hu
Yi Wang
Xiaolei Zhao
Lu Li
Chengbo Peng
Hongling Zhang
Yuan Zheng

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1620693

2,158 views

Original Research

Published on 17 Jul 2025

Pseudomonas aeruginosa-derived extracellular vesicles enhance macrophage aerobic glycolysis that fuels inflammation

in Microbial Physiology and Metabolism

Chun Li
Jing Peng
Lihua Xiao
Haiying Wu
Jing Chen
Nian Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1619101

2,732 views
2 citations

Original Research

Published on 17 Jul 2025

Evaluation of protein extraction methodologies on bacterial proteomic profiling: a comparative analysis

in Microbial Physiology and Metabolism

Hongning Jiang
Aiyun Han
Yangdong Zhang
Yanxin Li
Chao Jiang
Qijing Du
Rongbo Fan
Yongxin Yang
Rongwei Han

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1586662

4,592 views

Opinion

Published on 16 Jul 2025

Genetic improvement of a synthetic microbiota: a step further?

in Microbial Physiology and Metabolism

Marcel Martínez-Porchas
Diana Medina-Félix
Francisco Vargas-Albores
Estefanía Garibay-Valdez
Yuniel Méndez-Martínez
Luis Rafael Martínez-Córdova
Angel Martin Ortiz-Estrada

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1619874

3,691 views
2 citations

Original Research

Published on 14 Jul 2025

Identification of a preferred DNA binding sequence and novel regulon member for CadR in Pseudomonas aeruginosa PAO1

in Microbial Physiology and Metabolism

John K. Barrows
Ross M. Wood
Alaina B. Westee
Kamya A. Stubbs
Melanie Ratliff-Griffin
Michael W. Van Dyke

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1608957

3,209 views
1 citation

Correction

Published on 02 Jul 2025

Correction: Green microalga Chromochloris zofingiensis conserves substrate uptake pattern but changes their metabolic uses across trophic transition

in Microbial Physiology and Metabolism

Yuntao Hu
Nakian Kim
Melissa S. Roth
Katherine B. Louie
Suzanne M. Kosina
Shivani Upadhyaya
Tim L. Jeffers
Jacob S. Jordan
Benjamin P. Bowen
Krishna K. Niyogi

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1641452

1,213 views

Original Research

Published on 30 Jun 2025

Research on nitrogen transformation pathways of a thermophilic heterotrophic nitrifying bacterial consortium GW7

in Microbial Physiology and Metabolism

Yongqi Ma
Jiali Wang
Yindi Zhang
Wenping Guan
Wenrui Qi
Xisheng Tai
Dong Lin
Rong He
Likun Sun
Aiwen Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1578865

2,288 views
1 citation

Original Research

Published on 25 Jun 2025

Reactive oxygen species mediate bioeffects of static magnetic field via impairment of long-chain fatty acid degradation in Escherichia coli

in Microbial Physiology and Metabolism

Haodong Li
Yanwen Fang
Jirong Huang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1586233

2,229 views
3 citations

Original Research

Published on 25 Jun 2025

Combination of fluorescent reagents with 2-(4-aminophenyl) benzothiazole and safranin O was useful for analysis of spore structure, indicating the diversity of Bacillales species spores

in Microbial Physiology and Metabolism

Ritsuko Kuwana
Kiyoshi Ito
Hiromu Takamatsu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1603957

1,963 views

Original Research

Published on 24 Jun 2025

Kynurenine monooxygenase BcKMOL: a key regulator of growth, pathogenicity, and disease control in Botrytis cinerea

in Microbial Physiology and Metabolism

Bai Li
Xiaoying Liu
Jinping Zang
Hongzhe Cao
Helong Si
Kang Zhang
Jihong Xing
Jingao Dong

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1595008

1,627 views
1 citation

Review

Published on 24 Jun 2025

Molecular mechanisms and applications of natural transformation in bacteria

in Microbial Physiology and Metabolism

Changcheng Niu
Hao Wu
Xiaona Wang
Liying Hu
Yanping Han
Jianjun Qiao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1578813

7,400 views
2 citations

Original Research

Published on 24 Jun 2025

Genomic engineering in Rhizobium etli: implementation and evaluation of systems based on dCas9

in Microbial Physiology and Metabolism

Oussama Bellahsen
Rafael Díaz-Méndez
David Romero

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1604430

2,289 views

Original Research

Published on 18 Jun 2025

Isolation, identification, and production optimization of natural functional pigments produced by Talaromyces atroroseus LWT-1

in Microbial Physiology and Metabolism

Xian Xia
Li-Yu Liu
Miao Liu
Guo-Jun Hu
Wen-Ting Li
Zi-Yi Wang
Yao Pei
Yan-He Li
Jing-Jing Li
Yan-Xiang Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1612109

3,111 views

Original Research

Published on 16 Jun 2025

Intracellular self-assembly and metabolite analysis of key enzymes for L-lysine synthesis based on key components of cellulosomes

in Microbial Physiology and Metabolism

Nan Li
Bowen Du
Xiankun Ren
Lu Yang
Peng Du
Piwu Li
Jianbin Wang
Junlin Li
Jing Xiao
Junqing Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1596240

1,993 views
1 citation

2,809 articles

articles

Beyond pathogenicity: applications of the type III secretion system (T3SS) of Pseudomonas aeruginosa

Correction: Evaluation of protein extraction methodologies on bacterial proteomic profiling: a comparative analysis

Impairment in global protein synthesis uncouples UPR gene induction from HAC1 mRNA splicing in Saccharomyces cerevisiae

Combined transcriptome and metabolome analysis reveals the regulatory network of histidine kinase QseC in the two-component system of Glaesserella parasuis

From indigenous screening to pilot fermentation: comprehensive characterization of Bacillus subtilis YZ01 as a novel food-grade probiotic candidate

cAMP-CRP-activated E. coli causes growth arrest under stress conditions

Phosphite inhibits Phytophthora cinnamomi by downregulating oxidoreductases and disrupting energy metabolism

Gene expression dynamics in Bacillus cereus and Bacillus subtilis treated with Thymus vulgaris and Origanum vulgare subsp. hirtum essential oils

Multi-omics investigation reveals unique markers in Klebsiella pneumoniae compared to closely related species

Identification of the malonylation modification in Staphylococcus aureus and insight into the regulators in biofilm formation

Multi-omics analysis of Taiwanofungus gaoligongensis: effects of different cultivation methods on secondary metabolites

Pseudomonas aeruginosa-derived extracellular vesicles enhance macrophage aerobic glycolysis that fuels inflammation

Evaluation of protein extraction methodologies on bacterial proteomic profiling: a comparative analysis

Genetic improvement of a synthetic microbiota: a step further?

Identification of a preferred DNA binding sequence and novel regulon member for CadR in Pseudomonas aeruginosa PAO1

Correction: Green microalga Chromochloris zofingiensis conserves substrate uptake pattern but changes their metabolic uses across trophic transition

Research on nitrogen transformation pathways of a thermophilic heterotrophic nitrifying bacterial consortium GW7

Reactive oxygen species mediate bioeffects of static magnetic field via impairment of long-chain fatty acid degradation in Escherichia coli

Combination of fluorescent reagents with 2-(4-aminophenyl) benzothiazole and safranin O was useful for analysis of spore structure, indicating the diversity of Bacillales species spores

Kynurenine monooxygenase BcKMOL: a key regulator of growth, pathogenicity, and disease control in Botrytis cinerea

Molecular mechanisms and applications of natural transformation in bacteria

Genomic engineering in Rhizobium etli: implementation and evaluation of systems based on dCas9

Isolation, identification, and production optimization of natural functional pigments produced by Talaromyces atroroseus LWT-1

Intracellular self-assembly and metabolite analysis of key enzymes for L-lysine synthesis based on key components of cellulosomes