Frontiers in Microbiology | Microbial Physiology and Metabolism

Original Research

Published on 26 Mar 2025

Long-read, multi-amplicon sequencing to explore genetic diversity associated with starch degrading phenotypes in amylolytic Lactobacillaceae

in Microbial Physiology and Metabolism

Sandra A. Olivier
Michelle K. Bull
John P. Bowman
Tom Ross
Belinda Chapman

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1548052

2,043 views

Original Research

Published on 25 Mar 2025

The photoinduced β-carotene synthesis in Blakeslea trispora is dependent on WC-2A

in Microbial Physiology and Metabolism

Qiang Zheng
Kaili Zhu
Ke Wang
Yi Wang
Xiaobin Yu
Wei Luo

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1554367

2,118 views
1 citation

Original Research

Published on 12 Mar 2025

Optimization of the fermentation culture conditions of Bacillus amyloliquefaciens ck-05 using response surface methodology

in Microbial Physiology and Metabolism

Xiaoyu Liu
Jerome Jeyakumar John Martin
Xinyu Li
Lixia Zhou
Rui Li
Qihong Li
Jianwei Zhang
Dengqiang Fu
Hongxing Cao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1552645

6,191 views
5 citations

Original Research

Published on 11 Mar 2025

The role of CsrA in controls the extracellular electron transfer and biofilm production in Geobacter sulfurreducens

in Microbial Physiology and Metabolism

Alberto Hernández-Eligio
Leticia Vega-Alvarado
Xinying Liu
Jessica Cholula-Calixto
Guillermo Huerta-Miranda
Katy Juárez

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1534446

2,927 views
2 citations

Original Research

Published on 06 Mar 2025

A process-based dynamic model for succinic acid production by Actinobacillus succinogenes: regulatory role of ATP/ADP balance

in Microbial Physiology and Metabolism

Emiliano Salucci
Fabrizio Cartenì
Francesco Giannino
Elisabetta de Alteriis
Francesca Raganati
Stefano Mazzoleni

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1512982

2,988 views

Original Research

Published on 04 Mar 2025

Global discovery, expression pattern, and regulatory role of miRNA-like RNAs in Ascosphaera apis infecting the Asian honeybee larvae

in Microbial Physiology and Metabolism

Xiaoyu Liu
Sihai Geng
Daoyou Ye
Wenhua Xu
Yidi Zheng
Fangji Wang
Jianpeng Lei
Ying Wu
Haibin Jiang
Ying Hu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1551625

2,442 views

Original Research

Published on 28 Feb 2025

Functional diversification of oxalate decarboxylases in terms of enzymatic activity, morphosporogenesis, stress regulation and virulence in Colletotrichum siamense

in Microbial Physiology and Metabolism

Yanyun Lv
Yu Liu
Yuqing Lin
Huiying Zheng
Jingting Yan
Yu Zhang
Weiguo Miao
Wei Wu
Chunhua Lin

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1547950

1,753 views

Original Research

Published on 26 Feb 2025

The LysR-type transcriptional regulator STY2660 is involved in outer membrane protein synthesis, bile resistance and motility in Salmonella enterica serovar Typhi

in Microbial Physiology and Metabolism

Yitzel Gama-Martínez
Victor M. Hernández
Sergio Encarnación-Guevara
Ángel Martínez-Batallar
Ismael Hernández-Lucas

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1554102

1,985 views
1 citation

Original Research

Published on 26 Feb 2025

Fractionating proteins with nitrite-reducing activity in “Candidatus Kuenenia stuttgartiensis” strain CSTR1

in Microbial Physiology and Metabolism

Emea Okorafor Ude
Pranathi Sure
Rimjhim Rimjhim
Lorenz Adrian
Chang Ding

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1483703

2,089 views
1 citation

Opinion

Published on 19 Feb 2025

Archaeal DNA replication initiation: bridging LUCA's legacy and modern mechanisms

in Microbial Physiology and Metabolism

Rémi Dulermo

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1561973

3,429 views
1 citation

Original Research

Published on 12 Feb 2025

Propionate metabolism in Desulfurella acetivorans

in Microbial Physiology and Metabolism

Eugenio Pettinato
Thomas M. Steiner
Eric A. Cassens
Thomas Geisberger
Christian Seitz
Simone König
Wolfgang Eisenreich
Ivan A. Berg

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1545849

2,416 views
2 citations

Original Research

Published on 12 Feb 2025

Two sexually compatible monokaryons from a heterokaryotic Lentinula edodes strain respond differently to heat stress

in Microbial Physiology and Metabolism

Yuan Guo
Wenyu Jiao
Yajie Zhang
Meiting Tan
Qi Gao
Yu Liu
Shouxian Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1522075

1,753 views
1 citation

Original Research

Published on 11 Feb 2025

Proteogenomic annotation of T6SS components identified in Bacteroides fragilis secretome

in Microbial Physiology and Metabolism

Natalya B. Zakharzhevskaya
Olga Yu Shagaleeva
Daria A. Kashatnikova
Anton O. Goncharov
Daria V. Evsyutina
Dmitry A. Kardonsky
Elizaveta A. Vorobeva
Artemiy S. Silantiev
Viktoria D. Kazakova
Irina V. Kolesnikova

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1495971

2,999 views
2 citations

Original Research

Published on 07 Feb 2025

Methanotroph-methylotroph lipid adaptations to changing environmental conditions

in Microbial Physiology and Metabolism

Nora Richter
Laura Villanueva
Ellen C. Hopmans
Nicole J. Bale
Jaap S. Sinninghe Damsté
Darci Rush

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1532719

3,165 views
2 citations

Original Research

Published on 07 Feb 2025

Antifungal activity and mechanism of Phoebe bournei wood essential oil against two dermatophytes

in Microbial Physiology and Metabolism

Yan Yang
Qinglin Sun
Yuting Zhang
Junhua Huang
Wenjun Ma
Qi Yang
Zaikang Tong
Junhong Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1539918

2,926 views
4 citations

Original Research

Published on 06 Feb 2025

Fission yeast cells deficient in siderophore biosynthesis require Str2 for ferrichrome-dependent growth

in Microbial Physiology and Metabolism

Berthy Mbuya
Samuel Plante
Tobias Vahsen
Ariane Brault
Simon Labbé

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1527727

2,182 views

Original Research

Published on 05 Feb 2025

Multi-omics investigation of high-transglutaminase production mechanisms in Streptomyces mobaraensis and co-culture-enhanced fermentation strategies

in Microbial Physiology and Metabolism

Huanan Chang
Ziyu Zheng
Hao Li
Yanqiu Xu
Gengyao Zhen
Yao Zhang
Xidong Ren
Xinli Liu
Deqiang Zhu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1525673

3,231 views
3 citations

Original Research

Published on 05 Feb 2025

Biochemical characterization of the Escherichia coli surfaceome: a focus on type I fimbriae and flagella

in Microbial Physiology and Metabolism

Devon W. Kavanaugh
Adeline Sivignon
Yannick Rossez
Zina Chouit
Christophe Chambon
Louane Béal
Mathilde Bonnet
Michel Hébraud
Yann Guérardel
Hang Thi Thu Nguyen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1507286

2,653 views
1 citation

Original Research

Published on 04 Feb 2025

Transcriptomic and metabolomic analysis of recalcitrant phosphorus solubilization mechanisms in Trametes gibbosa

in Microbial Physiology and Metabolism

Yulan Chen
Akasha Farooq
XieLuyao Wei
Leitao Qin
Yong Wang
Lingzi Zhang
Quanju Xiang
Ke Zhao
Xiumei Yu
Qiang Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1520459

2,351 views
3 citations

Original Research

Published on 31 Jan 2025

Untargeted metabolomic analysis uncovers metabolic variability of four Bifidobacterial strains for probiotic development

in Microbial Physiology and Metabolism

Kailong Liu
Guoqiang Yao
Zhan Yang
Tian Huang
Lai-Yu Kwok
Heping Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1522036

3,282 views
4 citations

Original Research

Published on 30 Jan 2025

A novel two-component system contributing the catabolism of c-di-GMP influences virulence in Aeromonas veronii

in Microbial Physiology and Metabolism

Chaolun Liu
Jia Shao
Xiang Ma
Yanqiong Tang
Juanjuan Li
Hong Li
Xue Chi
Zhu Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1527317

2,468 views
1 citation

Original Research

Published on 29 Jan 2025

Effect of potato glycoside alkaloids on mitochondria energy metabolism of Fusarium solani, the root rot pathogen of Lycium barbarum

in Microbial Physiology and Metabolism

Ruiyun Li
Bin Wang
Wei Chen
Chongqing Zhang
Nan Li
Yupeng Wang
Yuke Yan
Yuyan Sun
Jing He

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1512027

1,916 views

Original Research

Published on 28 Jan 2025

Bioactive sorbicillinoid derivatives from an endophytic fungus Trichoderma citrinoviride

in Microbial Physiology and Metabolism

Yan-Ping Xia
Yan Xie
Li Rao
Guo-Ping Yin

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1485032

1,757 views
2 citations

Original Research

Published on 28 Jan 2025

Genome-wide identification of novel flagellar motility genes in Pseudomonas syringae pv. tomato DC3000

in Microbial Physiology and Metabolism

Zichu Yang
Tyler Helmann
Maël Baudin
Karl J. Schreiber
Zhongmeng Bao
Paul Stodghill
Adam Deutschbauer
Jennifer D. Lewis
Bryan Swingle

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1535114

2,852 views

2,809 articles

articles

Long-read, multi-amplicon sequencing to explore genetic diversity associated with starch degrading phenotypes in amylolytic Lactobacillaceae

The photoinduced β-carotene synthesis in Blakeslea trispora is dependent on WC-2A

Optimization of the fermentation culture conditions of Bacillus amyloliquefaciens ck-05 using response surface methodology

The role of CsrA in controls the extracellular electron transfer and biofilm production in Geobacter sulfurreducens

A process-based dynamic model for succinic acid production by Actinobacillus succinogenes: regulatory role of ATP/ADP balance

Global discovery, expression pattern, and regulatory role of miRNA-like RNAs in Ascosphaera apis infecting the Asian honeybee larvae

Functional diversification of oxalate decarboxylases in terms of enzymatic activity, morphosporogenesis, stress regulation and virulence in Colletotrichum siamense

The LysR-type transcriptional regulator STY2660 is involved in outer membrane protein synthesis, bile resistance and motility in Salmonella enterica serovar Typhi

Fractionating proteins with nitrite-reducing activity in “Candidatus Kuenenia stuttgartiensis” strain CSTR1

Archaeal DNA replication initiation: bridging LUCA's legacy and modern mechanisms

Propionate metabolism in Desulfurella acetivorans

Two sexually compatible monokaryons from a heterokaryotic Lentinula edodes strain respond differently to heat stress

Proteogenomic annotation of T6SS components identified in Bacteroides fragilis secretome

Methanotroph-methylotroph lipid adaptations to changing environmental conditions

Antifungal activity and mechanism of Phoebe bournei wood essential oil against two dermatophytes

Fission yeast cells deficient in siderophore biosynthesis require Str2 for ferrichrome-dependent growth

Multi-omics investigation of high-transglutaminase production mechanisms in Streptomyces mobaraensis and co-culture-enhanced fermentation strategies

Biochemical characterization of the Escherichia coli surfaceome: a focus on type I fimbriae and flagella

Transcriptomic and metabolomic analysis of recalcitrant phosphorus solubilization mechanisms in Trametes gibbosa

Untargeted metabolomic analysis uncovers metabolic variability of four Bifidobacterial strains for probiotic development

A novel two-component system contributing the catabolism of c-di-GMP influences virulence in Aeromonas veronii

Effect of potato glycoside alkaloids on mitochondria energy metabolism of Fusarium solani, the root rot pathogen of Lycium barbarum

Bioactive sorbicillinoid derivatives from an endophytic fungus Trichoderma citrinoviride

Genome-wide identification of novel flagellar motility genes in Pseudomonas syringae pv. tomato DC3000