Frontiers in Microbiology | Microbiotechnology

Methods

Published on 28 Jan 2025

A sequencing-based method for quantifying gene-deletion mutants of bacteria in the intracellular environment

in Microbiotechnology

Xiao Fei
Zengzhi Yuan
Sandra Marina Wellner
Yibing Ma
John Elmerdahl Olsen

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1487724

515 views

Original Research

Published on 27 Jan 2025

Fortifying plant fortresses: siderophores in defense against Cercospora leaf spot disease in Vigna radiata L.

in Microbiotechnology

Anushree Kamath
Abhishek Sharma
Arpit Shukla
Paritosh Parmar
Dhara Patel

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1492139

553 views

Original Research

Published on 23 Jan 2025

Comparison of lignin degradation and flavor compound formation in roasted tobacco by two Bacillus subtilis strains

in Microbiotechnology

Junmin Wang
Teng Long
Zhenkun Jiang
Wenjun Mu
Mingliang Su
Li Ni
Shunhua Ji
Yuqing Wang
Kangxi Zhou
Renfeng Zhan

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1538773

567 views

Original Research

Published on 22 Jan 2025

Cost-effective whole-cell biosynthesis of ursodeoxycholic acid using engineered Escherichia coli with a multienzyme cascade

in Microbiotechnology

Xue Zhang
Jiagang Xin
Mengyu Liu
Yue Zhang
Haoni Luan
Wei Feng
Fei Wang
Wei Xu
Peng Song

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1538237

703 views

Original Research

Published on 20 Jan 2025

An environmental isolate of Pseudomonas, 20EI1, reduces Aspergillus flavus growth in an iron-dependent manner and alters secondary metabolism

in Microbiotechnology

Elizabeth M. Wyman
W. Scott Grayburn
Matthew K. Gilbert
Matthew D. Lebar
Jessica M. Lohmar
Jeffrey W. Cary
Thomas J. C. Sauters
Antonis Rokas
Ana M. Calvo

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1514950

965 views

Original Research

Published on 20 Jan 2025

Assessing spacer acquisition rates in E. coli type I-E CRISPR arrays

in Microbiotechnology

Luke J. Peach
Haoyun Zhang
Brian P. Weaver
James Q. Boedicker

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1498959

876 views

Original Research

Published on 15 Jan 2025

Biorefinery—inspired, two-step valorization strategy to manage plant-based recalcitrant organic waste, involving solvent extraction, and fermentation with Bacillus clausii—a proof of concept study

in Microbiotechnology

Sreejith Meppoyilam
Ajith Madhavan
Chinchu Bose
Jayasree Pooja
Swetha Suresh
Bipin G. Nair
Sanjay Pal

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1507918

1,127 views

Original Research

Published on 15 Jan 2025

Interaction between nitrate and trichloroethene bioreduction in mixed anaerobic cultures

in Microbiotechnology

Dong-Mei Yang
Fen-Li Min
Ying Li
Jia-Lu Ling
Hui-Xian Zhong
Yu-Chun Xia
Ying Feng
Li-Ya Zhao
Zhao-Hua Li
Li-Lian Wen

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1504235

509 views

Review

Published on 07 Jan 2025

Global perspectives on the biodegradation of LDPE in agricultural systems

in Microbiotechnology

Jani E. Mendoza
Daniel Tineo
Beimer Chuquibala-Checan
Nilton Atalaya-Marin
Victor H. Taboada-Mitma
Josué Tafur-Culqui
Ever Tarrillo
Darwin Gómez-Fernández
Malluri Goñas
María Andrea Reyes-Reyes

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1510817

1,278 views

Original Research

Published on 07 Jan 2025

Effective semi-fed-batch saccharification with high lignocellulose loading using co-culture of Clostridium thermocellum and Thermobrachium celere strain A9

in Microbiotechnology

Sreyneang Nhim
Sirilak Baramee
Chakrit Tachaapaikoon
Patthra Pason
Khanok Ratanakhanokchai
Ayaka Uke
Ruben Michael Ceballos
Akihiko Kosugi
Rattiya Waeonukul

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1519060

678 views

Editorial

Published on 07 Jan 2025

Editorial: Microbial prospecting and biomaterials

in Microbiotechnology

Selvakumar Rajendran
Karthik Loganathan
Ketul C. Popat

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1540191

338 views

Original Research

Published on 07 Jan 2025

Rational engineering of Escherichia coli strain for stable and enhanced biosynthesis of pinene

in Microbiotechnology

Muhammad Hammad Hussain
Lu Han
Yanlong Wei
Muhammad Javid
Kamran Ashraf
Maria Martuscelli
Waleed Aldahmash
Meijin Guo
Ali Mohsin
Zhanxia Li

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1527113

675 views

Original Research

Published on 06 Jan 2025

Understanding the limitations of substrate degradation in bioelectrochemical systems

in Microbiotechnology

Hannah Bird
Sharon Velasquez-Orta
Elizabeth Heidrich

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1511142

789 views

Original Research

Published on 03 Jan 2025

High-affinity promotor binding of YhaJ mediates a low signal leakage for effective DNT detection

in Microbiotechnology

Myeongbin Kim
Ryun Kang
Hye Min Park
Eun Bi Cho
Hye Rim Lee
Seong Eon Ryu

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1510655

586 views

Original Research

Published on 24 Dec 2024

Organohalide respiration: retrospective and perspective through bibliometrics

in Microbiotechnology

Hengyi Liao
Xuhao Wang
Xin Wang
Manman Zhang
Yiji Zhang
Siqi Huang
Hongyan Wang
Huijuan Jin
Jingjing Wang
Xiuying Li

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1490849

1,969 views

Methods

Published on 23 Dec 2024

dna2bit: high performance genomic distance estimation software for microbial genome analysis

in Microbiotechnology

Juzeng Li
Yuxin Tian
Yi Wang
Li Jin

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1521181

937 views

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Articles

A sequencing-based method for quantifying gene-deletion mutants of bacteria in the intracellular environment

Fortifying plant fortresses: siderophores in defense against Cercospora leaf spot disease in Vigna radiata L.

Comparison of lignin degradation and flavor compound formation in roasted tobacco by two Bacillus subtilis strains

Cost-effective whole-cell biosynthesis of ursodeoxycholic acid using engineered Escherichia coli with a multienzyme cascade

An environmental isolate of Pseudomonas, 20EI1, reduces Aspergillus flavus growth in an iron-dependent manner and alters secondary metabolism

Assessing spacer acquisition rates in E. coli type I-E CRISPR arrays

Biorefinery—inspired, two-step valorization strategy to manage plant-based recalcitrant organic waste, involving solvent extraction, and fermentation with Bacillus clausii—a proof of concept study

Interaction between nitrate and trichloroethene bioreduction in mixed anaerobic cultures

Global perspectives on the biodegradation of LDPE in agricultural systems

Effective semi-fed-batch saccharification with high lignocellulose loading using co-culture of Clostridium thermocellum and Thermobrachium celere strain A9

Editorial: Microbial prospecting and biomaterials

Rational engineering of Escherichia coli strain for stable and enhanced biosynthesis of pinene

Understanding the limitations of substrate degradation in bioelectrochemical systems

High-affinity promotor binding of YhaJ mediates a low signal leakage for effective DNT detection

Organohalide respiration: retrospective and perspective through bibliometrics

dna2bit: high performance genomic distance estimation software for microbial genome analysis