Frontiers in Microbiology | Systems Microbiology

Original Research

Published on 14 Dec 2023

An efficient model for predicting human diseases through miRNA based on multiple-types of contrastive learning

in Systems Microbiology

Qingquan Liao
Xiangzheng Fu
Linlin Zhuo
Hao Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1325001

1,393 views
2 citations

Original Research

Published on 12 Dec 2023

Uncovering a causal connection between the Lachnoclostridium genus in fecal microbiota and non-alcoholic fatty liver disease: a two-sample Mendelian randomization analysis

in Systems Microbiology

Wanhui Dai
Dandong Cai
Shuai Zhou
Ang Li
Jinsong Xie
Jie Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1276790

4,979 views
9 citations

Original Research

Published on 07 Dec 2023

Marvels of Bacilli in soil amendment for plant-growth promotion toward sustainable development having futuristic socio-economic implications

in Systems Microbiology

Meenakshi Mukhopadhyay
Ashutosh Mukherjee
Sayak Ganguli
Archisman Chakraborti
Samrat Roy
Sudeshna Shyam Choudhury
Vetriselvan Subramaniyan
Vinoth Kumarasamy
Amany A. Sayed
Fatma M. El-Demerdash

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1293302

5,340 views
2 citations

Review

Published on 07 Dec 2023

Probiotic and postbiotic analytical methods: a perspective of available enumeration techniques

in Systems Microbiology

Marie-Eve Boyte
Andrzej Benkowski
Marco Pane
Hanan R. Shehata

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1304621

13,270 views
21 citations

Original Research

Published on 06 Dec 2023

CRISPR-Cas systems feature and targeting phages diversity in Lacticaseibacillus rhamnosus strains

in Systems Microbiology

Bahman Panahi
Behnaz Dehganzad
Yousef Nami

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1281307

2,115 views
9 citations

Review

Published on 05 Dec 2023

Application of artificial intelligence approaches to predict the metabolism of xenobiotic molecules by human gut microbiome

in Systems Microbiology

Aditya S. Malwe
Vineet K. Sharma

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1254073

5,271 views
3 citations

Original Research

Published on 04 Dec 2023

Rapid discrimination of Bifidobacterium longum subspecies based on MALDI-TOF MS and machine learning

in Systems Microbiology

Kexin Liu
Yajie Wang
Minlei Zhao
Gaogao Xue
Ailan Wang
Weijie Wang
Lida Xu
Jianguo Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1297451

2,513 views
4 citations

Original Research

Published on 04 Dec 2023

Insight into the mechanism of gallstone disease by proteomic and metaproteomic characterization of human bile

in Systems Microbiology

Xue-Ting Yang
Jie Wang
Ying-Hua Jiang
Lei Zhang
Ling Du
Jun Li
Feng Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1276951

4,317 views
4 citations

Original Research

Published on 04 Dec 2023

Phenotypic shifts induced by environmental pre-stressors modify antibiotic resistance in Staphylococcus aureus

in Systems Microbiology

Gui Nam Wee
Eun Sun Lyou
Susmita Das Nishu
Tae Kwon Lee

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1304509

1,502 views
2 citations

Review

Published on 01 Dec 2023

The interplay between the microbiota, diet and T regulatory cells in the preservation of the gut barrier in inflammatory bowel disease

in Systems Microbiology

Kathryn Prame Kumar
Joshua D. Ooi
Rimma Goldberg

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1291724

4,043 views
14 citations

Review

Published on 30 Nov 2023

Exploring the role of gut microbiota in advancing personalized medicine

in Systems Microbiology

Gouxin Huang
Raees Khan
Yilin Zheng
Ping-Chin Lee
Qingnan Li
Imran Khan

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1274925

7,986 views
17 citations

Original Research

Published on 28 Nov 2023

Agromyces chromiiresistens sp. nov., Novosphingobium album sp. nov., Sphingobium arseniciresistens sp. nov., Sphingomonas pollutisoli sp. nov., and Salinibacterium metalliresistens sp. nov.: five new members of Microbacteriaceae and Sphingomonadaceae from polluted soil

in Systems Microbiology

Ze-Shen Liu
Ke-Huan Wang
Man Cai
Mei-Ling Yang
Xiao-Kang Wang
Hong-Lin Ma
Yi-Han Yuan
Lin-Huan Wu
De-Feng Li
Shuang-Jiang Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1289110

2,615 views
7 citations

Original Research

Published on 23 Nov 2023

Causal effects of gut microbiome on hypertension: a Mendelian randomization study

in Systems Microbiology

Gang He
Yu Cao
Houzhao Wang
Xiaoying Lv

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1276050

4,272 views
1 citation

Original Research

Published on 23 Nov 2023

Causal relationship between gut microbiota and immune thrombocytopenia: a Mendelian randomization study of two samples

in Systems Microbiology

Dongmei Guo
Qian Chen
Guojun Wang
ChunPu Li
FinnGen consortium

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1190866

4,815 views
11 citations

Review

Published on 22 Nov 2023

A toolbox of machine learning software to support microbiome analysis

in Systems Microbiology

Laura Judith Marcos-Zambrano
Víctor Manuel López-Molina
Burcu Bakir-Gungor
Marcus Frohme
Kanita Karaduzovic-Hadziabdic
Thomas Klammsteiner
Eliana Ibrahimi
Leo Lahti
Tatjana Loncar-Turukalo
Xhilda Dhamo

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1250806

16,990 views
16 citations

Original Research

Published on 21 Nov 2023

Developing a multi-epitope vaccine candidate to combat porcine epidemic diarrhea virus and porcine deltacoronavirus co-infection by employing an immunoinformatics approach

in Systems Microbiology

Wei Hou
Heqiong Wu
Wenting Wang
Ruolan Wang
Wang Han
Sibei Wang
Bin Wang
Haidong Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1295678

3,348 views
3 citations