Frontiers in Microbiology | Systems Microbiology

Original Research

Published on 07 Jul 2023

A protease activity-based machine-learning approach as a complementary tool for conventional diagnosis of diarrhea-predominant irritable bowel syndrome

in Systems Microbiology

Kazuki Tanaka
Naoki Tanigawa
Isaiah Song
Toru Komatsu
Yugo Kuriki
Yukari Tanaka
Shin Fukudo
Yasuteru Urano
Shinji Fukuda

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1179534

4,063 views
1 citation

Original Research

Published on 06 Jul 2023

Causal Effects between Gut Microbiome and Myalgic Encephalomyelitis/Chronic Fatigue Syndrome: A Two-Sample Mendelian Randomization Study

in Systems Microbiology

Gang He
Yu Cao
Honghao Ma
Siran Guo
Wangzi Xu
Dai Wang
Yongquan Chen
Houzhao Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1190894

6,572 views
8 citations

Original Research

Published on 06 Jul 2023

Comparison of the gut microbiota and metabolites between Diannan small ear pigs and Diqing Tibetan pigs

in Systems Microbiology

Xuancheng Guan
Junhong Zhu
Lanlan Yi
Haichao Sun
Minghua Yang
Ying Huang
Hongbin Pan
Hongjiang Wei
Hongye Zhao
Yanguang Zhao

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1197981

3,972 views
4 citations

Original Research

Published on 05 Jul 2023

EVMP: enhancing machine learning models for synthetic promoter strength prediction by Extended Vision Mutant Priority framework

in Systems Microbiology

Weiqin Yang
Dexin Li
Ranran Huang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1215609

2,640 views
8 citations

Original Research

Published on 03 Jul 2023

Disease burden contributed by dietary exposure to aflatoxins in a mountainous city in Southwest China

in Systems Microbiology

Mei Qin
Li Cheng
Yan Li
Xiaoqin Tang
Yuan Gan
Jian Zhao
Shuquan Luo
Huadong Zhang
Lishi Zhang
Jinyao Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1215428

3,573 views
8 citations

Original Research

Published on 30 Jun 2023

The abundance and diversity of antibiotic resistance genes in layer chicken ceca is associated with farm enviroment

in Systems Microbiology

Shasha Xiao
Jiandui Mi
Yingxin Chen
Kunxian Feng
Liang Mei
Xindi Liao
Yinbao Wu
Yan Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1177404

4,251 views
6 citations

Original Research

Published on 29 Jun 2023

Antimicrobial resistance and virulence profiles of staphylococci isolated from clinical bovine mastitis

in Systems Microbiology

Feng Yang
Wenli Shi
Na Meng
Yiyu Zhao
Xuezhi Ding
Qinfan Li

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1190790

4,131 views
9 citations

Original Research

Published on 29 Jun 2023

Ensiling hybrid Pennisetum with lactic acid bacteria or organic acids improved the fermentation quality and bacterial community

in Systems Microbiology

Qixian Feng
Juan Zhang
Wenqing Ling
Abraham Allan Degen
Yi Zhou
Chenyan Ge
Fulin Yang
Jing Zhou

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1216722

2,593 views
3 citations

Review

Published on 23 Jun 2023

Microbiomes in the context of developing sustainable intensified aquaculture

in Systems Microbiology

Marlene Lorgen-Ritchie
Tamsyn Uren Webster
Jamie McMurtrie
David Bass
Charles R. Tyler
Andrew Rowley
Samuel A. M. Martin

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1200997

8,085 views
25 citations

Original Research

Published on 22 Jun 2023

Preventive role of cinnamaldehyde against tenuazonic acid- and Freund’s adjuvant-induced histopathological and biochemical alterations in the mouse model

in Systems Microbiology

Ankita Kumari
Karuna Singh

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1159881

2,442 views
2 citations

Original Research

Published on 21 Jun 2023

SAELGMDA: Identifying human microbe–disease associations based on sparse autoencoder and LightGBM

in Systems Microbiology

Feixiang Wang
Huandong Yang
Yan Wu
Lihong Peng
Xiaoling Li

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1207209

2,593 views
7 citations

Original Research

Published on 20 Jun 2023

Endoplasmic stress sensor Ire1 is involved in cytosolic/nuclear protein quality control in Pichia pastoris cells independent of HAC1

in Systems Microbiology

Yasmin Nabilah Binti Mohd Fauzee
Yuki Yoshida
Yukio Kimata

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1157146

3,731 views
6 citations

Original Research

Published on 20 Jun 2023

Monitoring lineages of growing and dividing bacteria reveals an inducible memory of mar operon expression

in Systems Microbiology

Calin C. Guet
Luke Bruneaux
Panos Oikonomou
Maximino Aldana
Philippe Cluzel

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1049255

2,685 views
4 citations

Correction

Published on 20 Jun 2023

Corrigendum: Association of polymicrobial interactions with dental caries development and prevention

in Systems Microbiology

Yimei Zhu
Ying Wang
Shuyang Zhang
Jiaxuan Li
Xin Li
Yuanyuan Ying
Jinna Yuan
Keda Chen
Shuli Deng
Qingjing Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1237596

1,229 views
5 citations

Methods

Published on 20 Jun 2023

Enabling oxygen-controlled microfluidic cultures for spatiotemporal microbial single-cell analysis

in Systems Microbiology

Keitaro Kasahara
Markus Leygeber
Johannes Seiffarth
Karina Ruzaeva
Thomas Drepper
Katharina Nöh
Dietrich Kohlheyer

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1198170

4,442 views
5 citations

Original Research

Published on 16 Jun 2023

Denitrification contributes to N2O emission in paddy soils

in Systems Microbiology

Hua Xiang
Yiguo Hong
Jiapeng Wu
Yu Wang
Fei Ye
Jiaqi Ye
Jing Lu
Aimin Long

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1218207

3,625 views
14 citations