Frontiers in Microbiology | Systems Microbiology

Original Research

Published on 19 Mar 2025

The research on the identification, taxonomy, and comparative genomics analysis of nine Bacillus velezensis strains significantly contributes to microbiology, genetics, bioinformatics, and biotechnology

in Systems Microbiology

Eduarda Guimarães Sousa
Gabriela Munis Campos
Marcus Vinícius Canário Viana
Gabriel Camargos Gomes
Diego Lucas Neres Rodrigues
Flavia Figueira Aburjaile
Belchiolina Beatriz Fonseca
Max Roberto Batista de Araújo
Mateus Matiuzzi da Costa
Eric Guedon

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1544934

6,105 views
5 citations

Original Research

Published on 19 Mar 2025

A comprehensive strategy for the development of a multi-epitope vaccine targeting Treponema pallidum, utilizing heat shock proteins, encompassing the entire process from vaccine design to in vitro evaluation of immunogenicity

in Systems Microbiology

Jing Jiang
Linglan Xu
Xuefeng Wang
Ming Wang
Youde Cao
Ranhui Li
Kang Zheng
Xian Wu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1551437

4,691 views
7 citations

Original Research

Published on 17 Mar 2025

Microbiomic insights into the unique effects of vaginal microbiota on preterm birth in Chinese pregnant women

in Systems Microbiology

Jun Zhang
Zhimin Xu
Mengjun Zhang
Jiaoning Fang
Yijing Zheng
Caihong Jiang
Mian Pan

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1560528

2,819 views
3 citations

Correction

Published on 12 Mar 2025

Corrigendum: Probiotic effects on skin health: comprehensive visual analysis and perspectives

in Systems Microbiology

Kexin Deng
Xiaofei Fan
Zhigen Yuan
Dian Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1583612

1,413 views
1 citation

Review

Published on 10 Mar 2025

Research status of the relationship between microecological imbalance and lung cancer

in Systems Microbiology

Xin Jin
Yangang Gu
Xiaojie Song

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1558379

3,472 views

Original Research

Published on 06 Mar 2025

Investigation of the effect of anti-PIA/PNAG antibodies on biofilm formation in Escherichia coli

in Systems Microbiology

Mina Shirmohammadpour
Mohammad Reza Mehrasbi
Nader Noshiranzadeh
Davoud Afshar
Kamyar Mansori
Bahman Mirzaei

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1552670

2,737 views
1 citation

Original Research

Published on 05 Mar 2025

HPV integration profiling using nanopore sequencing and association with cervical precancerous lesion

in Systems Microbiology

Ying Hou
Shoufeng Ni
Xin Liu
Xingyu Liu
Nan Wang
Fuqiang Xu
Jianyong Gao
Yanmei Li
Yuxiang Zhou
Huadong Tang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1522550

3,608 views

Original Research

Published on 04 Mar 2025

Synergistic removal of emerging contaminants using bacterial augmented floating treatment bed system (FTBs) of Typha latifolia and Canna indica for rejuvenation of polluted river water

in Systems Microbiology

Vandan Patel
Shruti Sharma
Chirayu Desai
Bhavtosh Kikani
Datta Madamwar

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1512992

3,546 views
2 citations

Original Research

Published on 03 Mar 2025

New entomopathogenic species in the Clavicipitaceae family (Hypocreales, Ascomycota) from the subtropical forests of Fujian, China

in Systems Microbiology

Longbing Lin
Yongsheng Lin
Nemat O. Keyhani
Huili Pu
Jiao Yang
Chengjie Xiong
Junya Shang
Yuchen Mao
Lixia Yang
Minghai Zheng

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1532341

3,414 views
4 citations

Original Research

Published on 28 Feb 2025

High prevalence of periodontal disease and periodontopathogen colonization in adults with autism spectrum disorder: a pilot study

in Systems Microbiology

Ludivine Berbé
Marie Machouart
Amandine Luc
Eliane Albuisson
Catherine Strazielle
Catherine Bisson

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1552656

2,845 views
1 citation

Original Research

Published on 28 Feb 2025

Spatiotemporal composition and diversity of endophyte communities in Dracaena cambodiana on Hainan Island

in Systems Microbiology

Sipeng Li
Yang Liu
Xin Yang
Yun Yang
Junxiang Peng
Yanhong Xu
Jianhe Wei

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1540669

2,045 views
2 citations

Original Research

Published on 27 Feb 2025

The skin microbiome on healthy and inflammatory altered canine skin determined by next generation sequencing

in Systems Microbiology

Lucia Štempelová
Lenka Micenková
Petr Andrla
Viola Strompfová

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1528747

4,960 views
1 citation

Original Research

Published on 25 Feb 2025

Composite quantile regression approach to batch effect correction in microbiome data

in Systems Microbiology

Jiwon Park
Taesung Park

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1484183

2,712 views

Original Research

Published on 25 Feb 2025

Cardiac energy metabolic disorder and gut microbiota imbalance: a study on the therapeutic potential of Shenfu Injection in rats with heart failure

in Systems Microbiology

Zhenyu Zhao
Zhixi Hu
Lin Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1509548

3,376 views
5 citations

Original Research

Published on 19 Feb 2025

Gut microbiota mediates the pro-pyroptosis effect of xierezhuyubuxu decoction in hepatocellular carcinoma

in Systems Microbiology

Zhili Zeng
Mingxuan Feng
Fan He
Enxin Zhang
Xiushen Li
Zebiao Cao

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1481111

3,486 views
2 citations

Original Research

Published on 07 Feb 2025

Intestinal microbiota as biomarkers for different colorectal lesions based on colorectal cancer screening participants in community

in Systems Microbiology

Gairui Li
Dan Zhao
Binfa Ouyang
Yinggang Chen
Yashuang Zhao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1529858

3,430 views
3 citations

Original Research

Published on 07 Feb 2025

Taxonomic refinement of Bacillus thuringiensis

in Systems Microbiology

Nagham Shiekh Suliman
Reza Talaei-Hassanloui
Hamid Abachi
Sadegh Zarei
Ebrahim Osdaghi

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1518307

5,347 views
3 citations

Systematic Review

Published on 05 Feb 2025

Systematic review of bidirectional interaction between gut microbiome, miRNAs, and human pathologies

in Systems Microbiology

Lorenzo Drago
Luigi Regenburgh De La Motte
Loredana Deflorio
Delia Francesca Sansico
Michela Salvatici
Emanuele Micaglio
Manuele Biazzo
Fabiana Giarritiello

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1540943

6,961 views
12 citations

Original Research

Published on 04 Feb 2025

Responses of a soil-inhabiting collembolan (Entomobrya proxima Folsom) to organic fertilizer addition illustrated by functional traits and gut bacterial community

in Systems Microbiology

Xinyue Yang
Gang Li
Weiming Xiu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1509447

1,626 views
2 citations

Original Research

Published on 03 Feb 2025

New bitongling regulates gut microbiota to predict angiogenesis in rheumatoid arthritis via the gut-joint axis: a deep neural network approach

in Systems Microbiology

Yin Guan
Xiaoqian Zhao
Yun Lu
Yue Zhang
Yan Lu
Yue Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1528865

4,619 views
10 citations

Review

Published on 31 Jan 2025

Energy metabolism and the intestinal barrier: implications for understanding and managing intestinal diseases

in Systems Microbiology

Shuai Chen
Caifei Shen
Xiaorui Zeng
Luqiang Sun
Fangli Luo
Renhong Wan
Yupeng Zhang
Xinyun Chen
Yujun Hou
Wen Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1515364

5,797 views
18 citations

Original Research

Published on 30 Jan 2025

Polygonatum kingianum polysaccharide alleviated intestinal injuries by mediating antioxidant ability and microbiota

in Systems Microbiology

Reng Qiu
Chuangye Pan
Yuxi Qin
Qianfei Wei
Yue Yu
Ying Zhang
Xuehan Xie
Jianqin Li
Shouhai Chen
Kun Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1492710

3,444 views
1 citation

Original Research

Published on 29 Jan 2025

In vitro modeling of feline gut fermentation: a comprehensive analysis of fecal microbiota and metabolic activity

in Systems Microbiology

Qianle Ren
Yuling Li
Mingmei Duan
Jinjun Li
Fangshu Shi
Yun Zhou
Wanjing Hu
Junfu Mao
Xiaoqiong Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1515865

3,472 views
1 citation

Original Research

Published on 27 Jan 2025

Machine learning models reveal microbial signatures in healthy human tissues, challenging the sterility of human organs

in Systems Microbiology

Anargyros Skoulakis
Giorgos Skoufos
Armen Ovsepian
Artemis G. Hatzigeorgiou

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1512304

3,385 views
1 citation

1,790 articles

articles

The research on the identification, taxonomy, and comparative genomics analysis of nine Bacillus velezensis strains significantly contributes to microbiology, genetics, bioinformatics, and biotechnology

A comprehensive strategy for the development of a multi-epitope vaccine targeting Treponema pallidum, utilizing heat shock proteins, encompassing the entire process from vaccine design to in vitro evaluation of immunogenicity

Microbiomic insights into the unique effects of vaginal microbiota on preterm birth in Chinese pregnant women

Corrigendum: Probiotic effects on skin health: comprehensive visual analysis and perspectives

Research status of the relationship between microecological imbalance and lung cancer

Investigation of the effect of anti-PIA/PNAG antibodies on biofilm formation in Escherichia coli

HPV integration profiling using nanopore sequencing and association with cervical precancerous lesion

Synergistic removal of emerging contaminants using bacterial augmented floating treatment bed system (FTBs) of Typha latifolia and Canna indica for rejuvenation of polluted river water

New entomopathogenic species in the Clavicipitaceae family (Hypocreales, Ascomycota) from the subtropical forests of Fujian, China

High prevalence of periodontal disease and periodontopathogen colonization in adults with autism spectrum disorder: a pilot study

Spatiotemporal composition and diversity of endophyte communities in Dracaena cambodiana on Hainan Island

The skin microbiome on healthy and inflammatory altered canine skin determined by next generation sequencing

Composite quantile regression approach to batch effect correction in microbiome data

Cardiac energy metabolic disorder and gut microbiota imbalance: a study on the therapeutic potential of Shenfu Injection in rats with heart failure

Gut microbiota mediates the pro-pyroptosis effect of xierezhuyubuxu decoction in hepatocellular carcinoma

Intestinal microbiota as biomarkers for different colorectal lesions based on colorectal cancer screening participants in community

Taxonomic refinement of Bacillus thuringiensis

Systematic review of bidirectional interaction between gut microbiome, miRNAs, and human pathologies

Responses of a soil-inhabiting collembolan (Entomobrya proxima Folsom) to organic fertilizer addition illustrated by functional traits and gut bacterial community

New bitongling regulates gut microbiota to predict angiogenesis in rheumatoid arthritis via the gut-joint axis: a deep neural network approach

Energy metabolism and the intestinal barrier: implications for understanding and managing intestinal diseases

Polygonatum kingianum polysaccharide alleviated intestinal injuries by mediating antioxidant ability and microbiota

In vitro modeling of feline gut fermentation: a comprehensive analysis of fecal microbiota and metabolic activity

Machine learning models reveal microbial signatures in healthy human tissues, challenging the sterility of human organs