Frontiers in Microbiomes

Original Research

Published on 15 May 2026

Host genotype and environment shape rhizosphere and root microbiome composition of pecan rootstocks

in Host and Microbe Associations

Paul Oladimeji Gabriel
Ciro Velasco-Cruz
Jennifer J. Randall

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1778537

310 views

Mini Review

Published on 15 May 2026

Computational and multi-omics systems biology for precision microbiome therapeutics

in Host and Microbe Associations

Ahmed Dewan
Maria Teresa Mascellino

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1842701

370 views

Original Research

Published on 14 May 2026

Protist community sites and structure under two barn management systems at a commercial dairy

in Environmental Microbiomes

Tawni L. Crippen
Dongmin Kim
Sonja L. Swiger
Robin C. Anderson

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1803341

330 views

Original Research

Published on 12 May 2026

Identifying microbial biomarkers of neurodegeneration: a comparative study in Alzheimer’s and Parkinson’s disease

in Host and Microbe Associations

Simon De Jaegher
David Pinzauti
Maria D’Aguanno
Erika Parkinson
James Schofield
Fabio Strazzeri
Paul Skipp
Rebekah Penrice-Randal
Amy Kunicki
Beth McCausland

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1831956

435 views

Review

Accepted on 08 May 2026

The Interplay Between Bile Acid Metabolism and Gut Microbiome in Biliary Tract Cancers

in Host and Microbe Associations

Ifeoma Ike
Farzad Teymouri
Christiana Crook
Max Hazeltine
Sofia Guzman
Dan Castillo
Daneng Li
Gagandeep Brar

Frontiers in Microbiomes

149 views

Original Research

Accepted on 07 May 2026

Altered Early-Life Gut Microbiota in Offspring of Pregnancies Complicated by CHD-Associated Pulmonary Hypertension

in Host and Microbe Associations

Yiyang Han
Haofeng Zhang
Jun Zhang

Frontiers in Microbiomes

107 views

Review

Published on 30 Apr 2026

Importance of human microbiome: an update

in Host and Microbe Associations

Maryem Wardi
Abdulmumini Baba Amin
Imane El Belghiti
Zohra Lemkhente
Ahmed Belmouden

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1787662

493 views

Original Research

Accepted on 29 Apr 2026

Soil microbial communities shift in response to cropping sequence diversification with perennial seed crops

in Environmental Microbiomes

Newton Z. Lupwayi
Nityananda Khanal
Mathew Richards
Rodrigo Ortega Polo

Frontiers in Microbiomes

218 views

Original Research

Accepted on 29 Apr 2026

Age-specific Early-life Gut Microbiome Associations with Eczema and Food Allergies During Early Immune Development

in Host and Microbe Associations

Harold Nunez
Timothy J. Straub
Nabeel Imam
David Goad
Noel T. Mueller
Ruben A. T. Mars
Cheryl Sew Hoy
Trillitye Paulline
Kimberley Sukhum

Frontiers in Microbiomes

332 views

Original Research

Accepted on 29 Apr 2026

Characterization of Bacterial Endophytes isolated from Cannabis sativa L. and Chelidonium majus L. for their application as Biostimulants and Biocontrol Agents

in Host and Microbe Associations

Mohammad Jamil Kaddoura
Laura Amaya-Quiroz
Mamta Rani
Zarna Shah
Kavya Reghunadh
Jamil Samsatly
Hacene Meglouli
Saji George

Frontiers in Microbiomes

221 views

Review

Accepted on 27 Apr 2026

Exploring the Gut-Brain Axis: Dietary Influences on Alzheimer's Disease Pathogenesis

in Nutrition, Metabolism and the Microbiome

Samira R. Mansour
Menna A, Khalaf
Mostafa A. Moustafa
Mardies A. Moustafa
AbdelRaouf A, Moustafa

Frontiers in Microbiomes

1,392 views

Original Research

Published on 24 Apr 2026

Characterization of the gut microbiome of wild Peromyscus sonoriensis in New Mexico, USA

in Host and Microbe Associations

Andrew M. Skidmore
Samuel M. Goodfellow
Robert A. Nofchissey
Limin Jiang
Jonathan Dunnum
Joseph A. Cook
Yan Guo
Ivana Mali
Steven B. Bradfute

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1672092

687 views

Review

Published on 22 Apr 2026

Understanding the human gut microbiome: from composition to disease association

in Host and Microbe Associations

Muneerah Abdullah Alali
Amal Bakr Shori

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1717288

1,178 views

Brief Research Report

Published on 22 Apr 2026

Uncovering leaf and root microbiomes of mangrove trees in French Guiana

in Environmental Microbiomes

Mathilde Vigneron
Sébastien Halary
Sandrine Crochemore
Laetitia Plaisance
Nathalie Parthuisot
Yvan Bettarel

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1782119

477 views

Editorial

Published on 21 Apr 2026

Editorial: The microbiome in cancer therapy response

in Host and Microbe Associations

Elizabeth M. Park
Liza Makowski
Katherine L. Cook

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1815455

448 views

Original Research

Accepted on 16 Apr 2026

Dietary transition to an Indigenous Greenlandic diet induces instant shifts in gut microbiota composition – A pilot intervention study

in Nutrition, Metabolism and the Microbiome

Mads Bjørn With Bjørnsen
Katie Margaret Bourke
Catherine Stanton
Paul Ross
Anders Johannes Hanesn
Aviaja Hauptmann

Frontiers in Microbiomes

291 views

Original Research

Published on 01 Apr 2026

Gut microbiota composition correlates with PBMC microRNA expression following maximal exercise testing in endurance athletes

in Nutrition, Metabolism and the Microbiome

Guy Shalmon
Guy Shapira
Rawan Ibrahim
Ifat Israel-Elgali
Meitar Grad
Rani Shlayem
Ilan Youngster
Mickey Scheinowitz
Noam Shomron

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1734737

1,068 views

Original Research

Accepted on 30 Mar 2026

Microbial Community Characterization of Multi-Crop Growouts in the XROOTS Aeroponic-Hydroponic System on the International Space Station

in Host and Microbe Associations

Christina LM Khodadad
Cory J. Spern
Mary Hummerick
Jennifer L Gooden
Cristiana J. Morales
Raymond M Wheeler
Orlando Melendez
Robert Morrow
John Wetzel
Ye Zhang

Frontiers in Microbiomes

398 views

Original Research

Published on 24 Mar 2026

Gut microbiota and its association with gastrointestinal symptoms and pharmacological treatments in a sibling-matched cohort with autism spectrum disorder

in Host and Microbe Associations

Florencia Peñalba
Andreina Guisande
Lucía Lamberti
Camila Rusiñol
Maite Irastorza
Florencia Konik
Claudio Iglesias
Paula Mendive
Gabriela Garrido
Andrés Parada

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1777385

730 views

Original Research

Published on 18 Mar 2026

Synergistic analysis of genome-resolved metagenomics and language-based machine learning reveals hidden probiotic genomes in the Indian healthy human gut microbiome

in Omics and Bioinformatics for Microbiomes

Arunmozhi Bharathi Achudhan
Reetumbhara Parthiban
Tejaswini Ramasubramanian
Kanchan Mukesh
Lilly M. Saleena

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1779767

818 views

Brief Research Report

Published on 09 Mar 2026

Shared taxa but distinct communities: within-individual comparisons of oral, nasal, and urinary microbiomes in asymptomatic “healthy” females

in Host and Microbe Associations

Sandra Jablonska
Alex Kula
Catherine Putonti

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1691965

443 views

Original Research

Published on 23 Feb 2026

Maize leaf endosphere microbiome was affected by domestication and shows patterns consistent with microbial dysbiosis

in Environmental Microbiomes

Ilksen Topcu
Julio S. Bernal
Sanjay Antony-Babu

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1735358

719 views

Original Research

Published on 13 Feb 2026

Trichoderma combined with palm kernel shell biochar promotes root health and rhizosphere biodiversity in young oil palm seedlings infected with Ganoderma boninense

in Host and Microbe Associations

Saran Anandan
Asgar Ali
Anurita Selvarajoo
Christina Vimala Supramaniam

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1742803

756 views

Original Research

Published on 13 Feb 2026

The prevalence and distribution of Acidobacteriota in the Nama Karoo of South Africa

in Environmental Microbiomes

Janca Pieters
Tersia Andrea Conradie
Karin Jacobs

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1653994

642 views

240 articles

articles

Host genotype and environment shape rhizosphere and root microbiome composition of pecan rootstocks

Computational and multi-omics systems biology for precision microbiome therapeutics

Protist community sites and structure under two barn management systems at a commercial dairy

Identifying microbial biomarkers of neurodegeneration: a comparative study in Alzheimer’s and Parkinson’s disease

The Interplay Between Bile Acid Metabolism and Gut Microbiome in Biliary Tract Cancers

Altered Early-Life Gut Microbiota in Offspring of Pregnancies Complicated by CHD-Associated Pulmonary Hypertension

Importance of human microbiome: an update

Soil microbial communities shift in response to cropping sequence diversification with perennial seed crops

Age-specific Early-life Gut Microbiome Associations with Eczema and Food Allergies During Early Immune Development

Characterization of Bacterial Endophytes isolated from Cannabis sativa L. and Chelidonium majus L. for their application as Biostimulants and Biocontrol Agents

Exploring the Gut-Brain Axis: Dietary Influences on Alzheimer's Disease Pathogenesis

Characterization of the gut microbiome of wild Peromyscus sonoriensis in New Mexico, USA

Understanding the human gut microbiome: from composition to disease association

Uncovering leaf and root microbiomes of mangrove trees in French Guiana

Editorial: The microbiome in cancer therapy response

Dietary transition to an Indigenous Greenlandic diet induces instant shifts in gut microbiota composition – A pilot intervention study

Gut microbiota composition correlates with PBMC microRNA expression following maximal exercise testing in endurance athletes

Microbial Community Characterization of Multi-Crop Growouts in the XROOTS Aeroponic-Hydroponic System on the International Space Station

Gut microbiota and its association with gastrointestinal symptoms and pharmacological treatments in a sibling-matched cohort with autism spectrum disorder

Synergistic analysis of genome-resolved metagenomics and language-based machine learning reveals hidden probiotic genomes in the Indian healthy human gut microbiome

Shared taxa but distinct communities: within-individual comparisons of oral, nasal, and urinary microbiomes in asymptomatic “healthy” females

Maize leaf endosphere microbiome was affected by domestication and shows patterns consistent with microbial dysbiosis

Trichoderma combined with palm kernel shell biochar promotes root health and rhizosphere biodiversity in young oil palm seedlings infected with Ganoderma boninense

The prevalence and distribution of Acidobacteriota in the Nama Karoo of South Africa