Frontiers in Microbiomes | Host and Microbe Associations

Original Research

Published on 15 May 2026

Host genotype and environment shape rhizosphere and root microbiome composition of pecan rootstocks

in Host and Microbe Associations

Paul Oladimeji Gabriel
Ciro Velasco-Cruz
Jennifer J. Randall

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1778537

310 views

Mini Review

Published on 15 May 2026

Computational and multi-omics systems biology for precision microbiome therapeutics

in Host and Microbe Associations

Ahmed Dewan
Maria Teresa Mascellino

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1842701

370 views

Original Research

Published on 12 May 2026

Identifying microbial biomarkers of neurodegeneration: a comparative study in Alzheimer’s and Parkinson’s disease

in Host and Microbe Associations

Simon De Jaegher
David Pinzauti
Maria D’Aguanno
Erika Parkinson
James Schofield
Fabio Strazzeri
Paul Skipp
Rebekah Penrice-Randal
Amy Kunicki
Beth McCausland

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1831956

435 views

Review

Accepted on 08 May 2026

The Interplay Between Bile Acid Metabolism and Gut Microbiome in Biliary Tract Cancers

in Host and Microbe Associations

Ifeoma Ike
Farzad Teymouri
Christiana Crook
Max Hazeltine
Sofia Guzman
Dan Castillo
Daneng Li
Gagandeep Brar

Frontiers in Microbiomes

149 views

Original Research

Accepted on 07 May 2026

Altered Early-Life Gut Microbiota in Offspring of Pregnancies Complicated by CHD-Associated Pulmonary Hypertension

in Host and Microbe Associations

Yiyang Han
Haofeng Zhang
Jun Zhang

Frontiers in Microbiomes

107 views

Review

Published on 30 Apr 2026

Importance of human microbiome: an update

in Host and Microbe Associations

Maryem Wardi
Abdulmumini Baba Amin
Imane El Belghiti
Zohra Lemkhente
Ahmed Belmouden

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1787662

493 views

Original Research

Accepted on 29 Apr 2026

Age-specific Early-life Gut Microbiome Associations with Eczema and Food Allergies During Early Immune Development

in Host and Microbe Associations

Harold Nunez
Timothy J. Straub
Nabeel Imam
David Goad
Noel T. Mueller
Ruben A. T. Mars
Cheryl Sew Hoy
Trillitye Paulline
Kimberley Sukhum

Frontiers in Microbiomes

332 views

Original Research

Accepted on 29 Apr 2026

Characterization of Bacterial Endophytes isolated from Cannabis sativa L. and Chelidonium majus L. for their application as Biostimulants and Biocontrol Agents

in Host and Microbe Associations

Mohammad Jamil Kaddoura
Laura Amaya-Quiroz
Mamta Rani
Zarna Shah
Kavya Reghunadh
Jamil Samsatly
Hacene Meglouli
Saji George

Frontiers in Microbiomes

221 views

Original Research

Published on 24 Apr 2026

Characterization of the gut microbiome of wild Peromyscus sonoriensis in New Mexico, USA

in Host and Microbe Associations

Andrew M. Skidmore
Samuel M. Goodfellow
Robert A. Nofchissey
Limin Jiang
Jonathan Dunnum
Joseph A. Cook
Yan Guo
Ivana Mali
Steven B. Bradfute

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1672092

687 views

Review

Published on 22 Apr 2026

Understanding the human gut microbiome: from composition to disease association

in Host and Microbe Associations

Muneerah Abdullah Alali
Amal Bakr Shori

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1717288

1,178 views

Editorial

Published on 21 Apr 2026

Editorial: The microbiome in cancer therapy response

in Host and Microbe Associations

Elizabeth M. Park
Liza Makowski
Katherine L. Cook

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1815455

448 views

Original Research

Accepted on 30 Mar 2026

Microbial Community Characterization of Multi-Crop Growouts in the XROOTS Aeroponic-Hydroponic System on the International Space Station

in Host and Microbe Associations

Christina LM Khodadad
Cory J. Spern
Mary Hummerick
Jennifer L Gooden
Cristiana J. Morales
Raymond M Wheeler
Orlando Melendez
Robert Morrow
John Wetzel
Ye Zhang

Frontiers in Microbiomes

398 views

Original Research

Published on 24 Mar 2026

Gut microbiota and its association with gastrointestinal symptoms and pharmacological treatments in a sibling-matched cohort with autism spectrum disorder

in Host and Microbe Associations

Florencia Peñalba
Andreina Guisande
Lucía Lamberti
Camila Rusiñol
Maite Irastorza
Florencia Konik
Claudio Iglesias
Paula Mendive
Gabriela Garrido
Andrés Parada

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1777385

730 views

Brief Research Report

Published on 09 Mar 2026

Shared taxa but distinct communities: within-individual comparisons of oral, nasal, and urinary microbiomes in asymptomatic “healthy” females

in Host and Microbe Associations

Sandra Jablonska
Alex Kula
Catherine Putonti

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1691965

443 views

Original Research

Published on 13 Feb 2026

Trichoderma combined with palm kernel shell biochar promotes root health and rhizosphere biodiversity in young oil palm seedlings infected with Ganoderma boninense

in Host and Microbe Associations

Saran Anandan
Asgar Ali
Anurita Selvarajoo
Christina Vimala Supramaniam

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1742803

756 views

Original Research

Published on 04 Feb 2026

Microbiota disparities in stool, oral swabs, and saliva between control and early-onset colorectal neoplasia groups: an exploratory analysis

in Host and Microbe Associations

Ji Eun Na
Tae Oh Kim
Yong Eun Park

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1687978

522 views

Original Research

Published on 28 Jan 2026

The influence of breast milk microbiota from HIV-infected women on infant gut microbiota colonization within the first two weeks of life

in Host and Microbe Associations

Privilege Tendai Munjoma
Jacqueline Wyss
Arthur John Mazhandu
Sebastian Bruno Ulrich Jordi
Stephanie Christine Ganal-Vonarburg
Rutendo Zinyama-Gutsire
Leolin Katsidzira
Bahtiyar Yilmaz
Benjamin Misselwitz
Kerina Duri

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1611702

1,028 views

Review

Published on 07 Jan 2026

The gut–brain connection: microbes’ influence on mental health and psychological disorders

in Host and Microbe Associations

Pegah Ataei
Hamidreza Kalantari
Tamara S. Bodnar
Raymond J. Turner

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1701608

11,945 views
1 citation

Original Research

Published on 22 Dec 2025

Microbial dysbiosis in melasma through community profiling

in Host and Microbe Associations

Yugandhar Reddy B.S
Chandraprabha Doraiswamy
Deepshikha Singh
Nagalakshmi Surendra
Aparna Damle
Maitreyee Dutta
Savitha Rajkumar
Brian Potterf
Arindam Roy
Bharat Cheviti

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1505565

2,318 views

Review

Published on 05 Dec 2025

Understanding the role of oral and vaginal microbiomes in HPV-related cervical, head, and neck cancers: knowledge gaps and feasibility in Sub-Saharan Africa

in Host and Microbe Associations

Hélène Eya Kamassa
Gnatoulma Katawa
Abiola Isawumi
Charles Olwal
Winfried Seth Gbewonyo
Peter Kojo Quashie
Yaw Bediako

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1576394

1,855 views

Original Research

Published on 11 Nov 2025

Active fungal infections alter the respiratory microbiome profiles of Mayo Clinic Arizona patients

in Host and Microbe Associations

Daniel R. Kollath
Kathrine McAulay
Emily A. Higgins Keppler
Kenta S. Reilly
Kenneth K. Sakata
Bridget M. Barker
Thomas E. Grys

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1699912

1,327 views

Original Research

Published on 14 Oct 2025

Interplay between host genetics and gut microbiome composition in the Japanese population

in Host and Microbe Associations

David Ortega-Reyes
Tadashi Takeuchi
Yusuke Ogata
Takuro Iwami
Wataru Suda
Tetsuya Kubota
Naoto Kubota
Takashi Kadowaki
Kohei Tomizuka
Hiroshi Ohno

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1635907

3,655 views

Original Research

Published on 10 Oct 2025

Resistome and microbiome profiling of bovine milk following antimicrobial dry cow therapy: insights from short- and long-read metagenomic sequencing

in Host and Microbe Associations

Leire Urrutia-Angulo
José Luis Lavín
Beatriz Oporto
Gorka Aduriz
Ana Hurtado
Medelin Ocejo

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1672438

2,248 views

Original Research

Published on 06 Oct 2025

Implications of cyclophosphamide, methotrexate, and 5-fluorouracil chemotherapy on hippocampal-dependent cognition and gut microbiome

in Host and Microbe Associations

Christa Corley
Chase Swinton
Taylor McElory
Bhavana Sridharan
Justin Thomas
Bailey Cronin
Vijayalakshmi Sridharan
Michael S. Robeson
Antiño R. Allen

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1486757

1,824 views
1 citation

117 articles

articles

Host genotype and environment shape rhizosphere and root microbiome composition of pecan rootstocks

Computational and multi-omics systems biology for precision microbiome therapeutics

Identifying microbial biomarkers of neurodegeneration: a comparative study in Alzheimer’s and Parkinson’s disease

The Interplay Between Bile Acid Metabolism and Gut Microbiome in Biliary Tract Cancers

Altered Early-Life Gut Microbiota in Offspring of Pregnancies Complicated by CHD-Associated Pulmonary Hypertension

Importance of human microbiome: an update

Age-specific Early-life Gut Microbiome Associations with Eczema and Food Allergies During Early Immune Development

Characterization of Bacterial Endophytes isolated from Cannabis sativa L. and Chelidonium majus L. for their application as Biostimulants and Biocontrol Agents

Characterization of the gut microbiome of wild Peromyscus sonoriensis in New Mexico, USA

Understanding the human gut microbiome: from composition to disease association

Editorial: The microbiome in cancer therapy response

Microbial Community Characterization of Multi-Crop Growouts in the XROOTS Aeroponic-Hydroponic System on the International Space Station

Gut microbiota and its association with gastrointestinal symptoms and pharmacological treatments in a sibling-matched cohort with autism spectrum disorder

Shared taxa but distinct communities: within-individual comparisons of oral, nasal, and urinary microbiomes in asymptomatic “healthy” females

Trichoderma combined with palm kernel shell biochar promotes root health and rhizosphere biodiversity in young oil palm seedlings infected with Ganoderma boninense

Microbiota disparities in stool, oral swabs, and saliva between control and early-onset colorectal neoplasia groups: an exploratory analysis

The influence of breast milk microbiota from HIV-infected women on infant gut microbiota colonization within the first two weeks of life

The gut–brain connection: microbes’ influence on mental health and psychological disorders

Microbial dysbiosis in melasma through community profiling

Understanding the role of oral and vaginal microbiomes in HPV-related cervical, head, and neck cancers: knowledge gaps and feasibility in Sub-Saharan Africa

Active fungal infections alter the respiratory microbiome profiles of Mayo Clinic Arizona patients

Interplay between host genetics and gut microbiome composition in the Japanese population

Resistome and microbiome profiling of bovine milk following antimicrobial dry cow therapy: insights from short- and long-read metagenomic sequencing

Implications of cyclophosphamide, methotrexate, and 5-fluorouracil chemotherapy on hippocampal-dependent cognition and gut microbiome