Frontiers in Microbiomes | Host and Microbe Associations

Original Research

Published on 19 May 2025

Categorizing and characterizing intestinal dysbiosis: evaluating stool microbial test clinical utility

in Host and Microbe Associations

Lia Oliver
Marta Malagón
Sara Ramió-Pujol
Mireia Sánchez-Vizcaino
Roser Sánchez-Algans
Eva Lacosta
Marc Saéz-Zafra
Mariona Serra-Pagès
Xavier Aldeguer
Jesús Garcia-Gil

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1512257

3,483 views
2 citations

Systematic Review

Published on 16 May 2025

The role of gut microbiota in autoimmune disease progression and therapy: a comprehensive synthesis

in Host and Microbe Associations

Mohammad Adawi

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1553243

5,667 views
1 citation

Original Research

Published on 30 Apr 2025

Stability of oral and fecal microbiome at room temperature: impact on diversity

in Host and Microbe Associations

Blanca Rius-Sansalvador
David Bars-Cortina
Olfat Khannous-Lleiffe
Ainhoa Garcia-Serrano
Elisabet Guinó
Ester Saus
Toni Gabaldón
Victor Moreno
Mireia Obón-Santacana

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1334775

2,115 views
1 citation

Mini Review

Published on 28 Apr 2025

Insights into human respiratory microbiome under dysbiosis and its analysis tool

in Host and Microbe Associations

Mehfooz Helal
Vinay Kumar Bari

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1549166

2,113 views

Original Research

Published on 22 Apr 2025

Optimisation of cutaneous microbiota sampling methodology

in Host and Microbe Associations

Dario Leonardo Balacco
Ajoy Bardhan
Hadeer Ibrahim
Sarah A. Kuehne
Melissa M. Grant
Josefine Hirschfeld
Adrian H. M. Heagerty
Iain L. Chapple

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1559981

2,519 views

Original Research

Published on 09 Apr 2025

Relationships between rumen methanogens and fungal communities and their response to changes in alfalfa forms and starch in sheep diets

in Host and Microbe Associations

Wenliang Guo
Meila Na
Shuwei Liu
Kenan Li
Haidong Du
Jing Zhang
Yu Zhang
Renhua Na
Yulan Liu

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1567462

1,525 views
2 citations

Original Research

Published on 18 Feb 2025

Unveiling host-genetic drivers of caecal microbial communities in chickens through genome-wide association studies

in Host and Microbe Associations

Ankit Hinsu
Xiaoxia Dai
Christos Dadousis
Melanie Hay
Bruno Fosso
Matteo Crotta
Ramesh Pandit
Javier Guitian
Fiona Tomley
Prakash Koringa

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1539923

2,519 views

Original Research

Published on 04 Feb 2025

A multi-strain human skin microbiome model provides a testbed for disease modeling

in Host and Microbe Associations

Angela L. Maloney
Tyler Crawford
Jordan Hurlbut
Monica Martinez
Thomas J. Mulhern
Elizabeth L. Wiellette
Else M. Vedula
Vidhya Vijayakumar

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1473292

4,894 views
1 citation

Original Research

Published on 20 Jan 2025

Staphylococcus aureus carriage is associated with microbiome composition in the nares and oropharynx, not the hand, of monozygotic twins

in Host and Microbe Associations

Mark R. Dalman
W. Brian Simison
Danny Nielsen
Sabana Bhatta
Noor Ramahi
Clair Yee
Dipendra Thapaliya
Jhalka Kadariya
Shanice Cheatham
Hailee Olson

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1457940

2,057 views

Methods

Published on 19 Dec 2024

Effects of feces storage conditions for host-microbiota screenings in C. elegans

in Host and Microbe Associations

Laury Caron
Claudia Miriam Alonzo De la Rosa
Khoudia Diop
Stéphanie Miard
Stefan Taubert
André Marette
Frédéric Picard

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1426254

1,587 views

Review

Published on 04 Dec 2024

Unveiling microbial dynamics: a review of health and immune enhancement in school settings

in Host and Microbe Associations

Philip Asumang
Richard Ntumi
Francis Dwomoh

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1488702

2,914 views
1 citation

Hypothesis and Theory

Published on 04 Dec 2024

Gut eutrophication

in Host and Microbe Associations

Chika Edward Uzoigwe

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1481250

1,108 views

Original Research

Published on 21 Nov 2024

Metagenomic characterization of the tracheobronchial microbiome in lung cancer

in Host and Microbe Associations

Alexis Bailey
Stephanie Hogue
Christine M. Pierce
Shirlene Paul
Natalie La Fuente
Ram Thapa
Youngchul Kim
Lary A. Robinson

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1457537

1,924 views
2 citations

Original Research

Published on 19 Nov 2024

The ability of the Lab4 probiotic consortium to impact upon the functionality of serum deprived human keratinocytes in vitro

in Host and Microbe Associations

Sophie E. Thomas
Joshua Kerry-Smith
Susan F. Plummer
Jack P. Bate
Daniel A. John
Evie Lawrence
Lydia Powell
Jordanna Dally
Ryan Moseley
Daryn R. Michael

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1488650

2,479 views
1 citation

Original Research

Published on 21 Oct 2024

Distinct Cutibacterium acnes subspecies defendens strains classified by multi-omics dissection alleviate inflammatory skin lesions of a rosacea-like mouse model

in Host and Microbe Associations

Hanseol Kim
Kihyun Lee
Ji Young Lee
Bo Eun Kwon
Hyun Jeong Kim
Hyunkyung Park
Taekyung Kim
Jun-Gu Kwak
Joung Eun Choi
Kwang Hee Hong

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1362408

5,523 views
1 citation

Review

Published on 11 Oct 2024

Vaginal dysbiosis and the potential of vaginal microbiome-directed therapeutics

in Host and Microbe Associations

Valerie Diane Valeriano
Emilia Lahtinen
In-Chan Hwang
Yichan Zhang
Juan Du
Ina Schuppe-Koistinen

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1363089

15,290 views
16 citations

Review

Published on 09 Oct 2024

Bovine reproductive tract and microbiome dynamics: current knowledge, challenges, and its potential to enhance fertility in dairy cows

in Host and Microbe Associations

Deepshikha Gupta
Antisa Sarkar
Yash Pal
Vishal Suthar
Aakash Chawade
Sandeep Kumar Kushwaha

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1473076

6,429 views
7 citations

Review

Published on 07 Oct 2024

Immune-reactive tumor organoids system to determine the effects of microbial metabolites on cancer immunity and immunotherapies

in Host and Microbe Associations

Azza M. El-Derby
Cecilia R. Schaaf
Ethan Shelkey
Katherine L. Cook
Konstantinos I. Votanopoulos
Shay Soker

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1411322

2,442 views
1 citation

Brief Research Report

Published on 02 Oct 2024

Translating macroecological models to predict microbial establishment probability in an agricultural inoculant introduction

in Host and Microbe Associations

Isaac M. Klimasmith
Bing Wang
Sora Yu
Yasuo Yoshikuni
Angela D. Kent

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1452476

1,716 views

Review

Published on 23 Sep 2024

Bacteriophages: a double-edged sword in the gastrointestinal tract

in Host and Microbe Associations

Yuqi Wei

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1450523

5,042 views
4 citations

Original Research

Published on 03 Sep 2024

Machine learning models can identify individuals based on a resident oral bacteriophage family

in Host and Microbe Associations

Gita Mahmoudabadi
Kelsey Homyk
Adam B. Catching
Ana Mahmoudabadi
Helen Bermudez Foley
Arbel D. Tadmor
Rob Phillips

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1408203

1,798 views

Mini Review

Published on 15 Aug 2024

Navigating regulatory and analytical challenges in live biotherapeutic product development and manufacturing

in Host and Microbe Associations

Microbiome Therapeutics Innovation Group
Dana Barberio

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1441290

8,667 views
23 citations

Mini Review

Published on 30 Jul 2024

Clinical application of live biotherapeutic products in infectious diseases

in Host and Microbe Associations

Bhagyashri D. Navalkele
Teena Chopra

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1415083

4,264 views
6 citations

Original Research

Published on 29 Jul 2024

Mouse diet and vendor impact microbiome perturbation and recovery from early-life pulses of amoxicillin

in Host and Microbe Associations

Noelle Curtis-Joseph
Rachel Peterson
Claire E. Brown
Chapman Beekman
Peter Belenky

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1432202

2,949 views
2 citations

100 articles

articles

Categorizing and characterizing intestinal dysbiosis: evaluating stool microbial test clinical utility

The role of gut microbiota in autoimmune disease progression and therapy: a comprehensive synthesis

Stability of oral and fecal microbiome at room temperature: impact on diversity

Insights into human respiratory microbiome under dysbiosis and its analysis tool

Optimisation of cutaneous microbiota sampling methodology

Relationships between rumen methanogens and fungal communities and their response to changes in alfalfa forms and starch in sheep diets

Unveiling host-genetic drivers of caecal microbial communities in chickens through genome-wide association studies

A multi-strain human skin microbiome model provides a testbed for disease modeling

Staphylococcus aureus carriage is associated with microbiome composition in the nares and oropharynx, not the hand, of monozygotic twins

Effects of feces storage conditions for host-microbiota screenings in C. elegans

Unveiling microbial dynamics: a review of health and immune enhancement in school settings

Gut eutrophication

Metagenomic characterization of the tracheobronchial microbiome in lung cancer

The ability of the Lab4 probiotic consortium to impact upon the functionality of serum deprived human keratinocytes in vitro

Distinct Cutibacterium acnes subspecies defendens strains classified by multi-omics dissection alleviate inflammatory skin lesions of a rosacea-like mouse model

Vaginal dysbiosis and the potential of vaginal microbiome-directed therapeutics

Bovine reproductive tract and microbiome dynamics: current knowledge, challenges, and its potential to enhance fertility in dairy cows

Immune-reactive tumor organoids system to determine the effects of microbial metabolites on cancer immunity and immunotherapies

Translating macroecological models to predict microbial establishment probability in an agricultural inoculant introduction

Bacteriophages: a double-edged sword in the gastrointestinal tract

Machine learning models can identify individuals based on a resident oral bacteriophage family

Navigating regulatory and analytical challenges in live biotherapeutic product development and manufacturing

Clinical application of live biotherapeutic products in infectious diseases

Mouse diet and vendor impact microbiome perturbation and recovery from early-life pulses of amoxicillin