Frontiers in Microbiomes | Omics and Bioinformatics for Microbiomes

Original Research

Accepted on 19 Sep 2025

Analysis of Microbiome High Dimensional Experimental Design Data using Generalized Linear Models and ANOVA Simultaneous Component Analysis

in Omics and Bioinformatics for Microbiomes

Fentaw Abegaz
Davar Abedini
Lemeng Dong
Johan Westerhuis
Fred Van Eeuwijk
Harro Bouwmeester
Age K. Smilde

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1584516

181 views

Original Research

Published on 09 Sep 2025

Cold-water immersion alleviates intestinal damage induced by exertional heat stroke via modulation of gut microbiota in rats

in Omics and Bioinformatics for Microbiomes

Lyu Xuan
Xiaojun Sun
Baozhong Wang
Feng Chen
Yuhao Yi
Handing Mao
Yuxi Wang
Guifeng Zhao
Jiaxing Wang
Yuxiang Zhang

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1531991

567 views

Brief Research Report

Published on 30 Jun 2025

Gut microbiota diversity is altered in a sex-dependent manner in Shank3B heterozygote mice

in Omics and Bioinformatics for Microbiomes

Finley Turner
Mykle Williams
Sophie Gregoretti
Delano Bielamowicz
Kylie Roach
Lil Gehner
Anjali Kunnatha
Shekinah Phillips
Rosie Hagel
Rebecca Harshman

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1628819

1,447 views

Editorial

Published on 03 Jun 2025

Editorial: Harnessing machine learning to decode plant-microbiome dynamics for sustainable agriculture

in Omics and Bioinformatics for Microbiomes

Mohsen Yoosefzadeh Najafabadi
Eman M. Khalaf
Mohamed Mysara
Ahmed M. El-Baz

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1602938

1,318 views

Brief Research Report

Published on 15 May 2025

Comparative analysis of Illumina, PacBio, and nanopore for 16S rRNA gene sequencing of rabbit’s gut microbiota

in Omics and Bioinformatics for Microbiomes

Iliyass Biada
María Antonia Santacreu
Oscar González-Recio
Noelia Ibáñez-Escriche

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1587712

3,962 views
2 citations

Original Research

Published on 12 Nov 2024

Optimisation of the sampling method for skin microbiome studies in healthy children: a pilot cohort study

in Omics and Bioinformatics for Microbiomes

Anita Smith
Noor-Ul-Huda Ghori
Rachael Foster
Mark P. Nicol
Timothy Barnett
Janessa Pickering
Alexandra Whelan
Tobias Strunk
Fiona Wood
Edward Raby

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1446394

3,660 views
3 citations

Original Research

Published on 18 Jul 2024

Antimicrobial resistance burden, and mechanisms of its emergence in gut microbiomes of Indian population

in Omics and Bioinformatics for Microbiomes

Nisha Chandel
Jeremiah Paul Gorremuchu
Vivek Thakur

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1432646

2,715 views

Original Research

Published on 03 Jun 2024

Identifying stationary microbial interaction networks based on irregularly spaced longitudinal 16S rRNA gene sequencing data

in Omics and Bioinformatics for Microbiomes

Jie Zhou
Jiang Gui
Weston D. Viles
Haobin Chen
Siting Li
Juliette C. Madan
Modupe O. Coker
Anne G. Hoen

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1366948

1,817 views

Original Research

Published on 13 Feb 2024

Complete genome sequences of Rhizobium sp. strain SL42 and Hydrogenophaga sp. strain SL48, microsymbionts of Amphicarpaea bracteata

in Omics and Bioinformatics for Microbiomes

Gayathri Ilangumaran
Sowmyalakshmi Subramanian
Donald Lawrence Smith

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1309947

2,748 views
5 citations

Original Research

Published on 14 Feb 2023

Identification and spatio-temporal tracking of ubiquitous phage families in the human microbiome

in Omics and Bioinformatics for Microbiomes

Arbel D. Tadmor
Gita Mahmoudabadi
Helen B. Foley
Rob Phillips

Frontiers in Microbiomes

doi 10.3389/frmbi.2022.1097124

2,490 views
3 citations