Frontiers in Microbiomes

Original Research

Published on 27 Jan 2026

Community assembly following disturbance in batch anaerobic digesters displays highly reproducible secondary succession and a shifting stochastic-deterministic balance

Flor de María Guerrero-Toledo
Teodoro Espinosa-Solares
Guadalupe Hernández-Eugenio
David H. Huber

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1707779

498 views

Editorial

Published on 20 Jan 2026

Editorial: Gut microbiota modulation to mitigate stress-induced functional changes

Ruoting Yang
Rasha Hammamieh

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1731851

455 views

Review

Published on 12 Jan 2026

Bile acids and gut microbiota: interactions and impacts on polycystic ovary syndrome

Haiqing Qian
Jialing Tao
Lingli Shi
Haiyan Sun
Li Yang
Li juan Cui
Wenting Xu
Lihong Wang

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1702198

607 views

Review

Published on 07 Jan 2026

The gut–brain connection: microbes’ influence on mental health and psychological disorders

Pegah Ataei
Hamidreza Kalantari
Tamara S. Bodnar
Raymond J. Turner

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1701608

3,990 views

Perspective

Published on 05 Jan 2026

Multilevel selection theory informs context-dependent mycorrhizal functioning

Anne M. Katula
Nancy Collins Johnson
V. Bala Chaudhary
Michelle E. Afkhami

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1676639

1,086 views

Original Research

Published on 22 Dec 2025

Microbial dysbiosis in melasma through community profiling

Yugandhar Reddy B.S
Chandraprabha Doraiswamy
Deepshikha Singh
Nagalakshmi Surendra
Aparna Damle
Maitreyee Dutta
Savitha Rajkumar
Brian Potterf
Arindam Roy
Bharat Cheviti

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1505565

1,815 views

Original Research

Published on 16 Dec 2025

Impact of DNA extraction techniques and sequencing approaches on microbial community profiling accuracy

Polina Zoruk
Maxim Morozov
Vladimir Veselovsky
Aleksandra Strokach
Vladislav Babenko
Ksenia Klimina

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1688681

1,277 views

Review

Published on 05 Dec 2025

Understanding the role of oral and vaginal microbiomes in HPV-related cervical, head, and neck cancers: knowledge gaps and feasibility in Sub-Saharan Africa

Hélène Eya Kamassa
Gnatoulma Katawa
Abiola Isawumi
Charles Olwal
Winfried Seth Gbewonyo
Peter Kojo Quashie
Yaw Bediako

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1576394

1,399 views

Original Research

Published on 28 Nov 2025

Identification of microbial communities associated with Phymatotrichopsis omnivora sclerotia in two Texas fields

Maxwell Sturdivant
Sanjay Antony-Babu
Elizabeth Pierson
Thomas M. Chappell
Thomas Isakeit

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1666691

853 views

Brief Research Report

Published on 27 Nov 2025

From leaves to microbes: How diet and season shape the fecal microbiome of captive Coquerel´s Sifakas (Propithecus coquereli)

Jonas Schweikhard
Andreas Pauly
Paul Wilhelm Dierkes
Franziska Zoelzer

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1680152

584 views

Brief Research Report

Published on 25 Nov 2025

Corrosion inhibition of an aluminum alloy by environmentally derived microbial biofilms

Zachary T. Burton
Han Liu
Nathan Stumme
Scott K. Shaw
Steven Harris
Simon Laflamme
Kaoru Ikuma

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1675064

1,042 views

Original Research

Published on 17 Nov 2025

Integrated omics analysis of PGPR and AMF effects on soil microbiota and root metabolites in Isatis indigotica

Shuai Yang
Ting Yuan
Tingting Duan
Huimin Zhu
Xiaoxia Zhang
Haihong Zhang
Junjie Jiang
Jun Yang
Lichuan Hu
Yu Yu

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1709335

1,384 views

Original Research

Published on 11 Nov 2025

Active fungal infections alter the respiratory microbiome profiles of Mayo Clinic Arizona patients

Daniel R. Kollath
Kathrine McAulay
Emily A. Higgins Keppler
Kenta S. Reilly
Kenneth K. Sakata
Bridget M. Barker
Thomas E. Grys

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1699912

1,031 views

Original Research

Published on 17 Oct 2025

The EDEN ISS mobile test facility microbiome changes by cleaning and continued use

Luis Gaiser
Kristina Beblo-Vranesevic
Rob Van Houdt
Jana Fahrion
Louise Gillet de Chalonge
Jess M. Bunchek
Paul Zabel
Daniel Schubert
Petra Rettberg

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1608732

1,544 views

Original Research

Published on 15 Oct 2025

Analysis of microbiome high-dimensional experimental design data using generalized linear models and ANOVA simultaneous component analysis

Fentaw Abegaz
Davar Abedini
Lemeng Dong
Johan A. Westerhuis
Fred van Eeuwijk
Harro Bouwmeester
Age K. Smilde

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1584516

2,124 views

Original Research

Published on 14 Oct 2025

Interplay between host genetics and gut microbiome composition in the Japanese population

David Ortega-Reyes
Tadashi Takeuchi
Yusuke Ogata
Takuro Iwami
Wataru Suda
Tetsuya Kubota
Naoto Kubota
Takashi Kadowaki
Kohei Tomizuka
Hiroshi Ohno

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1635907

2,922 views

Original Research

Published on 10 Oct 2025

Resistome and microbiome profiling of bovine milk following antimicrobial dry cow therapy: insights from short- and long-read metagenomic sequencing

Leire Urrutia-Angulo
José Luis Lavín
Beatriz Oporto
Gorka Aduriz
Ana Hurtado
Medelin Ocejo

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1672438

1,753 views

Original Research

Published on 08 Oct 2025

Serial nitrogen-phosphate co-limitation controls the primary productivity in the transitional waters of northern South China Sea and the Pearl River Estuary

Yuanhao Liu
Xunying Zhou
Ruoyu Niu
Rongman Yan
Shuaishuai Xu
Kangli Guo
Jing Guo
Jianchang Tao
Sha Wu
Shengwei Hou

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1655960

1,707 views

Original Research

Published on 06 Oct 2025

Implications of cyclophosphamide, methotrexate, and 5-fluorouracil chemotherapy on hippocampal-dependent cognition and gut microbiome

Christa Corley
Chase Swinton
Taylor McElory
Bhavana Sridharan
Justin Thomas
Bailey Cronin
Vijayalakshmi Sridharan
Michael S. Robeson
Antiño R. Allen

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1486757

1,456 views
1 citation

Original Research

Published on 26 Sep 2025

Diverse cultivation strategies are necessary to capture microbial diversity in High Arctic lake sediment

Brittany M. Berdy
Claire E. Williams
Maria Sizova
Dawoon Jung
Nil Tandogan
Edgar D. Goluch
Slava Epstein

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1619859

7,698 views

Original Research

Published on 26 Sep 2025

Olivine and dissolved alkalinity trigger different bacterial community shifts in water and oyster gills: insights from a mesocosm experiment

Dominik Antoni
Marco Rump
Gunnar Gerdts

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1659695

2,216 views

Original Research

Published on 18 Sep 2025

Investigating impacts from topsoil stockpile height on soil microbial communities

Ashley Fischer
Jay P. Singh
Jonathan Van Hamme
Eric Bottos
Lauchlan H. Fraser

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1607677

1,322 views

Original Research

Published on 15 Sep 2025

The co-application of arbuscular mycorrhizal fungus and Trichoderma on anthracnose disease in common vetch

Jia He
Faxi Li
Rongchun Zheng
Meiting Bai
Ping Wang
Tingyu Duan

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1654549

912 views
1 citation

Editorial

Published on 15 Sep 2025

Editorial: Live Biotherapeutic Products: where are we?

Glenn Tillotson

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1664282

1,354 views
1 citation

69 Publications

volumes

Community assembly following disturbance in batch anaerobic digesters displays highly reproducible secondary succession and a shifting stochastic-deterministic balance

Editorial: Gut microbiota modulation to mitigate stress-induced functional changes

Bile acids and gut microbiota: interactions and impacts on polycystic ovary syndrome

The gut–brain connection: microbes’ influence on mental health and psychological disorders

Multilevel selection theory informs context-dependent mycorrhizal functioning

Microbial dysbiosis in melasma through community profiling

Impact of DNA extraction techniques and sequencing approaches on microbial community profiling accuracy

Understanding the role of oral and vaginal microbiomes in HPV-related cervical, head, and neck cancers: knowledge gaps and feasibility in Sub-Saharan Africa

Identification of microbial communities associated with Phymatotrichopsis omnivora sclerotia in two Texas fields

From leaves to microbes: How diet and season shape the fecal microbiome of captive Coquerel´s Sifakas (Propithecus coquereli)

Corrosion inhibition of an aluminum alloy by environmentally derived microbial biofilms

Integrated omics analysis of PGPR and AMF effects on soil microbiota and root metabolites in Isatis indigotica

Active fungal infections alter the respiratory microbiome profiles of Mayo Clinic Arizona patients

The EDEN ISS mobile test facility microbiome changes by cleaning and continued use

Analysis of microbiome high-dimensional experimental design data using generalized linear models and ANOVA simultaneous component analysis

Interplay between host genetics and gut microbiome composition in the Japanese population

Resistome and microbiome profiling of bovine milk following antimicrobial dry cow therapy: insights from short- and long-read metagenomic sequencing

Serial nitrogen-phosphate co-limitation controls the primary productivity in the transitional waters of northern South China Sea and the Pearl River Estuary

Implications of cyclophosphamide, methotrexate, and 5-fluorouracil chemotherapy on hippocampal-dependent cognition and gut microbiome

Diverse cultivation strategies are necessary to capture microbial diversity in High Arctic lake sediment

Olivine and dissolved alkalinity trigger different bacterial community shifts in water and oyster gills: insights from a mesocosm experiment

Investigating impacts from topsoil stockpile height on soil microbial communities

The co-application of arbuscular mycorrhizal fungus and Trichoderma on anthracnose disease in common vetch

Editorial: Live Biotherapeutic Products: where are we?