Frontiers in Molecular Biosciences

Original Research

Published on 24 Oct 2022

Microbiota independent effects of oligosaccharides on Caco-2 cells -A semi-targeted metabolomics approach using DI-FT-ICR-MS coupled with pathway enrichment analysis

Julia Jensen-Kroll
Tobias Demetrowitsch
Ingrid Clawin-Rädecker
Martin Klempt
Silvio Waschina
Karin Schwarz

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.968643

4,262 views
12 citations

Original Research

Published on 24 Oct 2022

Gut microbiota diversity and specific composition during immunotherapy in responders with non-small cell lung cancer

Fumihiro Shoji
Masafumi Yamaguchi
Masaki Okamoto
Shinkichi Takamori
Koji Yamazaki
Tatsuro Okamoto
Yoshihiko Maehara

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1040424

6,777 views
32 citations

Original Research

Published on 24 Oct 2022

Engineered bacterial host for genetic encoding of physiologically stable protein nitration

Nikolaj G. Koch
Tobias Baumann
Jessica H. Nickling
Anna Dziegielewski
Nediljko Budisa

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.992748

5,253 views
14 citations

Editorial

Published on 24 Oct 2022

Editorial: Methods in structural biology: Cryo-EM

Olga S. Sokolova

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1041373

2,248 views
1 citation

Methods

Published on 24 Oct 2022

SpiDec: Computing binodals and interfacial tension of biomolecular condensates from simulations of spinodal decomposition

Konstantinos Mazarakos
Ramesh Prasad
Huan-Xiang Zhou

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1021939

3,335 views
9 citations

Original Research

Published on 24 Oct 2022

Phenotype-based drug screening: An in vivo strategy to classify and identify the chemical compounds modulating zebrafish M-cell regeneration

Ankita Kumari
Xin-An Zeng
Abdul Rahaman
Muhammad Adil Farooq
Yanyan Huang
Mahafooj Alee
Runyu Yao
Murtaza Ali
Ibrahim Khalifa
Omnia Badr

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.984461

3,691 views
1 citation

Original Research

Published on 24 Oct 2022

The periplasmic chaperone Skp prevents misfolding of the secretory lipase A from Pseudomonas aeruginosa

Athanasios Papadopoulos
Max Busch
Jens Reiners
Eymen Hachani
Miriam Baeumers
Julia Berger
Lutz Schmitt
Karl-Erich Jaeger
Filip Kovacic
Sander H. J. Smits

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1026724

5,612 views
11 citations

Original Research

Published on 21 Oct 2022

Manganese oxidation counteracts the deleterious effect of low temperatures on biofilm formation in Pseudomonas sp. MOB-449

Lucila Ciancio Casalini
Ainelen Piazza
Fiorella Masotti
Betiana S. Garavaglia
Jorgelina Ottado
Natalia Gottig

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1015582

3,385 views
9 citations

Original Research

Published on 21 Oct 2022

Construction of m6A-based prognosis signature and prediction for immune and anti-angiogenic response

Xiang-Xu Wang
Li-Hong Wu
Qiong-Yi Dou
Liping Ai
Yajie Lu
Shi-Zhou Deng
Qing-Qing Liu
Hongchen Ji
Hong-Mei Zhang

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1034928

4,712 views
13 citations

Correction

Published on 21 Oct 2022

Corrigendum: ACE2 in the gut: The center of the 2019-nCoV infected pathology

Yuexin Guo
Boya Wang
Han Gao
Lei Gao
Rongxuan Hua
Jing-Dong Xu

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1063507

1,552 views

Original Research

Published on 21 Oct 2022

Gut microbiota-dependent adaptor molecule recruits DNA methyltransferase to the TLR4 gene in colonic epithelial cells to suppress inflammatory reactions

Hikari Narabayashi
Chiharu Koma
Kazuaki Nakata
Mion Ikegami
Yusuke Nakanishi
Jun Ogihara
Masato Tsuda
Akira Hosono
Shigemasa Hanazawa
Kyoko Takahashi

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1005136

4,294 views
13 citations

Correction

Published on 21 Oct 2022

Corrigendum: Peroxisome proliferator–activated receptor-α: A pivotal regulator of the gastrointestinal tract

Yue-Xin Guo
Bo-Ya Wang
Han Gao
Rong-Xuan Hua
Lei Gao
Cheng-Wei He
Ying Wang
Jing-Dong Xu

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1063551

1,481 views
2 citations

Opinion

Published on 21 Oct 2022

Radical-SAM dependent nucleotide dehydratase (SAND), rectification of the names of an ancient iron-sulfur enzyme using NC-IUBMB recommendations

Yuxuan Ji
Li Wei
Anqi Da
Holger Stark
Peter-Leon Hagedoorn
Simone Ciofi-Baffoni
Sally A. Cowley
Ricardo O. Louro
Smilja Todorovic
Maria Andrea Mroginski

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1032220

4,522 views
5 citations

Editorial

Published on 21 Oct 2022

Editorial: Systems modeling: Approaches and applications–Volume II

Daniel Garrido
Alberto J. M. Martín
Ernesto Pérez-Rueda

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1048727

2,052 views

Editorial

Published on 21 Oct 2022

Editorial: Insights in molecular diagnostics and therapeutics: 2021

Matteo Becatti
William C. Cho

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1014416

2,597 views

Original Research

Published on 21 Oct 2022

Reduced platelet mitochondrial respiration and oxidative phosphorylation in patients with post COVID-19 syndrome are regenerated after spa rehabilitation and targeted ubiquinol therapy

Zuzana Sumbalová
Jarmila Kucharská
Zuzana Rausová
Patrik Palacka
Eleonóra Kovalčíková
Timea Takácsová
Viliam Mojto
Plácido Navas
Guillermo Lopéz-Lluch
Anna Gvozdjáková

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1016352

5,586 views
18 citations

Original Research

Published on 21 Oct 2022

Improved chemical and isotopic labeling of biomembranes in Bacillus subtilis by leveraging CRISPRi inhibition of beta-ketoacyl-ACP synthase (fabF)

Jonathan D. Nickels
Kyle S. Bonifer
Rachel R. Tindall
Ahmad Yahya
Luoxi Tan
Changwoo Do
Brian H. Davison
James G. Elkins

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1011981

3,212 views
2 citations

Original Research

Published on 21 Oct 2022

Immuno-dominant dengue NS1 peptides as antigens for production of monoclonal antibodies

Erandi Munasinghe
Maheshi Athapaththu
Wimaladharma Abeyewickreme

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.935456

5,490 views
2 citations

Original Research

Published on 20 Oct 2022

Identifying tumor immunity-associated molecular features in liver hepatocellular carcinoma by multi-omics analysis

Qianyun Shen
Yin He
Jiajie Qian
Xiaosheng Wang

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.960457

4,968 views
8 citations

Original Research

Published on 20 Oct 2022

Prognostic value, immune signature and molecular mechanisms of the APOBEC family members APOBEC1, APOBEC3A, APOBEC3G and APOBEC3H in pancreatic adenocarcinoma

Yunjie Duan
Yongxing Du
Zongting Gu
Xiaohao Zheng
Chengfeng Wang

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1036287

4,024 views
8 citations

Original Research

Published on 20 Oct 2022

Identification and validation of a novel tumor driver gene signature for diagnosis and prognosis of head and neck squamous cell carcinoma

Shixian Liu
Weiwei Liu
Zhao Ding
Xue Yang
Yuan Jiang
Yu Wu
Yehai Liu
Jing Wu

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.912620

4,926 views
10 citations

Editorial

Published on 20 Oct 2022

Editorial: Analytical devices based on immobilized macromolecules for structural and activity/affinity studies in drug discovery

Caterina Temporini
Enrica Calleri
Manuela Bartolini
Marcela Cristina de Moraes

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.971076

1,691 views

Brief Research Report

Published on 20 Oct 2022

The diversity of protein-protein interaction interfaces within T=3 icosahedral viral capsids

Digvijay Lalwani Prakash
Shachi Gosavi

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.967877

4,173 views
1 citation

Mini Review

Published on 19 Oct 2022

ADAMTS6: Emerging roles in cardiovascular, musculoskeletal and cancer biology

Timothy J. Mead

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.1023511

4,715 views
15 citations

1,424 Publications

volumes

Microbiota independent effects of oligosaccharides on Caco-2 cells -A semi-targeted metabolomics approach using DI-FT-ICR-MS coupled with pathway enrichment analysis

Gut microbiota diversity and specific composition during immunotherapy in responders with non-small cell lung cancer

Engineered bacterial host for genetic encoding of physiologically stable protein nitration

Editorial: Methods in structural biology: Cryo-EM

SpiDec: Computing binodals and interfacial tension of biomolecular condensates from simulations of spinodal decomposition

Phenotype-based drug screening: An in vivo strategy to classify and identify the chemical compounds modulating zebrafish M-cell regeneration

The periplasmic chaperone Skp prevents misfolding of the secretory lipase A from Pseudomonas aeruginosa

Manganese oxidation counteracts the deleterious effect of low temperatures on biofilm formation in Pseudomonas sp. MOB-449

Construction of m6A-based prognosis signature and prediction for immune and anti-angiogenic response

Corrigendum: ACE2 in the gut: The center of the 2019-nCoV infected pathology

Gut microbiota-dependent adaptor molecule recruits DNA methyltransferase to the TLR4 gene in colonic epithelial cells to suppress inflammatory reactions

Corrigendum: Peroxisome proliferator–activated receptor-α: A pivotal regulator of the gastrointestinal tract

Radical-SAM dependent nucleotide dehydratase (SAND), rectification of the names of an ancient iron-sulfur enzyme using NC-IUBMB recommendations

Editorial: Systems modeling: Approaches and applications–Volume II

Editorial: Insights in molecular diagnostics and therapeutics: 2021

Reduced platelet mitochondrial respiration and oxidative phosphorylation in patients with post COVID-19 syndrome are regenerated after spa rehabilitation and targeted ubiquinol therapy

Improved chemical and isotopic labeling of biomembranes in Bacillus subtilis by leveraging CRISPRi inhibition of beta-ketoacyl-ACP synthase (fabF)

Immuno-dominant dengue NS1 peptides as antigens for production of monoclonal antibodies

Identifying tumor immunity-associated molecular features in liver hepatocellular carcinoma by multi-omics analysis

Prognostic value, immune signature and molecular mechanisms of the APOBEC family members APOBEC1, APOBEC3A, APOBEC3G and APOBEC3H in pancreatic adenocarcinoma

Identification and validation of a novel tumor driver gene signature for diagnosis and prognosis of head and neck squamous cell carcinoma

Editorial: Analytical devices based on immobilized macromolecules for structural and activity/affinity studies in drug discovery

The diversity of protein-protein interaction interfaces within T=3 icosahedral viral capsids

ADAMTS6: Emerging roles in cardiovascular, musculoskeletal and cancer biology