Frontiers in Plant Science | Functional and Applied Plant Genomics

Original Research

Published on 18 Aug 2025

Comparative analysis of complete chloroplast genomes of Flemingia prostrata and Flemingia macrophylla, two commonly used medicinal plants in southern China

in Functional and Applied Plant Genomics

Fan Wei
Yang Lin
Danfeng Tang
Ying Liang
Shuangshuang Qin

Frontiers in Plant Science

doi 10.3389/fpls.2025.1591427

182 views

Original Research

Published on 14 Aug 2025

Metagenomic analysis of the effects of plant- and yeast-based formulations on the grapevine leaf microbiome of cv. ‘Touriga Franca’

in Functional and Applied Plant Genomics

Eliana Monteiro
Paula Baptista
Sofia Silva
Márcia Carvalho
Radek Bragança
Kieran J. Guinan
Neerakkal Sujeeth
Isabel Cortez
Berta Gonçalves
Isaura Castro

Frontiers in Plant Science

doi 10.3389/fpls.2025.1637143

389 views

Original Research

Accepted on 12 Aug 2025

Genome-wide Identification, Expression and Functional analysis of Glutathione S-transferase Family Members in Quercus dentata under Heavy Metal Stresses

in Functional and Applied Plant Genomics

Jingjing Sha
Xiangyue Wu
Ao Shen
Xin Pang
Wenbo Wang
Pingsheng Leng
Zenghui Hu
Yazhou Zhao
Xiangfeng He

Frontiers in Plant Science

doi 10.3389/fpls.2025.1641553

127 views

Original Research

Accepted on 11 Aug 2025

Comparative assessment of species identification methods for European Salicornia sources: A multifaceted approach employing morphology, nuclear DNA content, phylogenetic markers, RNA topology, and SSR fingerprinting

in Functional and Applied Plant Genomics

Andre Fussy
Samuele Austoni
Traud Winkelmann
Jutta Papenbrock

Frontiers in Plant Science

doi 10.3389/fpls.2025.1666009

Original Research

Accepted on 11 Aug 2025

MsDAD1 acts as a heat-induced "senescence brake" in alfalfa

in Functional and Applied Plant Genomics

Yuguang Song
Xinying Guo
Linyao Wang
Yingying Zheng
Ting Li
Wei Dong

Frontiers in Plant Science

doi 10.3389/fpls.2025.1664465

Original Research

Accepted on 11 Aug 2025

Uncovering dormancy stage predictors in Sweet Cherry through DNA methylation and machine learning integration

in Functional and Applied Plant Genomics

Gabriela M Saavedra
Poliana Povea
Claudio Urra
José Gaete-Loyola
Carlos Ernesto Maldonado
Andrea Miyasaka Almeida

Frontiers in Plant Science

doi 10.3389/fpls.2025.1659345

103 views

Data Report

Accepted on 11 Aug 2025

Complete Plastome of Elaeodendron glaucum (Rottb.) Pers.: Genomic Resources for Celastraceae Systematics

in Functional and Applied Plant Genomics

Dipta Sumeru Rinandio
Iin Pertiwi A Husaini
Mahat Magandhi
Irfan Martiansyah
Tri Yuni Indah Wulansari
Julisasi Tri Hadiah
Deden Girmansyah
Nanda Utami
Rugayah Rugayah
Arifin Surya Dwipa Irsyam

Frontiers in Plant Science

doi 10.3389/fpls.2025.1649473

Original Research

Published on 06 Aug 2025

Genome-wide identification and functional characterization of oleosin genes in peanut (Arachis hypogaea L.)

in Functional and Applied Plant Genomics

Meiling Hu
Jie Wu
Xiaomeng Xue
Li Huang
Nian Liu
Liying Yan
Yuning Chen
Xin Wang
Yanping Kang
Zhihui Wang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1623513

630 views

Review

Published on 05 Aug 2025

Beyond the genome: the role of functional markers in contemporary plant breeding

in Functional and Applied Plant Genomics

Tae-Chun Park
Pransiskudura Chamara Silva
Thomas Lübberstedt
M. Paul Scott

Frontiers in Plant Science

doi 10.3389/fpls.2025.1637299

1,037 views

Original Research

Accepted on 04 Aug 2025

Characterization and Expression Analysis of Transcription Factors in Spartina alterniflora Unveil Their Critical Roles in Salt Stress Resistance

in Functional and Applied Plant Genomics

Yuanyuan Jiang
Shoukun Chen
Shuqiang Gao
Jiahui Geng
Qin Shu
Shang Gao
Huihui Li

Frontiers in Plant Science

doi 10.3389/fpls.2025.1592211

120 views

Original Research

Accepted on 30 Jul 2025

Identification and Expression Analysis of the BnE2F/DP Gene Family in Brassica napus

in Functional and Applied Plant Genomics

Chun Fu
Shen Min
Wei Lijuan

Frontiers in Plant Science

doi 10.3389/fpls.2025.1641897

127 views

Original Research

Published on 30 Jul 2025

Genome-wide identification, characterization, and expression analysis of the SOS1 gene family in the medicinal plant Paeonia ostii under salt stress

in Functional and Applied Plant Genomics

Yahong Chen
Huabing Liang
Zhanchang Wang
Quaid Hussain
Xuexiong Zhang
Fazhi Chen
Xiaohua Wang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1614011

1,151 views

Data Report

Accepted on 28 Jul 2025

Chromosome-level assembly of the Glechoma longituba genome

in Functional and Applied Plant Genomics

Yang Dongdong
Gao Yubang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1597825

162 views

Original Research

Published on 25 Jul 2025

Association mapping and candidate gene identification for drought tolerance in sorghum

in Functional and Applied Plant Genomics

Huiting Min
Kang Wang
Tiantian Wang
Xinxiu Cheng
Ephrem Habyarimana
Yongfei Wang
Die Hu
Yi-Hong Wang
Lihua Wang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1629615

1,574 views

Correction

Published on 23 Jul 2025

Correction: Mitochondrial genome assembly and comparative analysis of decaploid Camellia hainanica

in Functional and Applied Plant Genomics

Shihui Zhang
Yuyan Zhang
Sheng Luo
Jie Gao
Haiyan Hu
Jinping Liu
Wenqiang Wu
Jian Wang
Xiaolong Huang
Hanggui Lai

Frontiers in Plant Science

doi 10.3389/fpls.2025.1658310

454 views

Original Research

Published on 23 Jul 2025

GWAS analysis of Fusarium head blight resistance in a Nordic-Baltic spring wheat panel

in Functional and Applied Plant Genomics

Shayan Syed
Andrius Aleliūnas
Rita Armonienė
Gintaras Brazauskas
Andrii Gorash

Frontiers in Plant Science

doi 10.3389/fpls.2025.1604296

1,126 views