Frontiers in Plant Science | Functional and Applied Plant Genomics

Original Research

Published on 02 Jul 2025

Characterization of the complete chloroplast genome and comparative analysis of the phylogeny and codon usage bias of three Yunnan wild rice species

in Functional and Applied Plant Genomics

Rongxin Li
Bo Wang
Suqin Xiao
Ling Chen
Fuyou Yin
Jinlu Li
Cong Jiang
Dunyu Zhang
Qiaofang Zhong
Yun Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1555104

124 views

Original Research

Published on 02 Jul 2025

Unraveling yield heterosis in Chinese cabbage hybrid by comparative transcriptomic analysis and LHCB1 gene function analysis

in Functional and Applied Plant Genomics

Ruihua Wang
Min Han
Taili Han
Ligong Xu
Yuanyuan Li

Frontiers in Plant Science

doi 10.3389/fpls.2025.1627259

166 views

Original Research

Published on 01 Jul 2025

Integrated morphophysiological, transcriptomic, and metabolomic data uncover the molecular mechanism of environmental adaptation of Zanthoxylum armatum with different latitudinal gradients

in Functional and Applied Plant Genomics

Yuan Guo
Xueqian Fu
Chong Sun
Yifei Deng
Han Liu
Long Tong
Mi Kuang
Ning Tang
Wenying Yang
Xia Liu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1622956

236 views

Original Research

Accepted on 30 Jun 2025

Identification of Two New GRAS Transcription Factors and Expression Analysis of These Genes in Chenopodium quinoa

in Functional and Applied Plant Genomics

XINWEN HOU
WEIZHONG LIU

Frontiers in Plant Science

doi 10.3389/fpls.2025.1579338

Original Research

Accepted on 30 Jun 2025

GWAS Analysis of Fusarium Head Blight Resistance in a Nordic-Baltic Spring Wheat Panel

in Functional and Applied Plant Genomics

Shayan Syed
Andrius Aleliūnas
Rita Armoniene
Gintaras Brazauskas
Andrii Gorash

Frontiers in Plant Science

doi 10.3389/fpls.2025.1604296

Editorial

Accepted on 30 Jun 2025

Editorial: Omics Applications in Agriculture Systems: Unveiling Functionality and Practicality

in Functional and Applied Plant Genomics

Dinesh Adhikary
Joann Mudge
Thiruvarangan Ramaraj

Frontiers in Plant Science

doi 10.3389/fpls.2025.1642175

122 views

Editorial

Accepted on 30 Jun 2025

Editorial: Genomics-driven advances in crop productivity and stress resilience

in Functional and Applied Plant Genomics

Parimalan Rangan
Robert Henry
Ambika Baldev Gaikwad

Frontiers in Plant Science

doi 10.3389/fpls.2025.1645714

Original Research

Accepted on 30 Jun 2025

Association mapping and candidate gene identification for drought tolerance in sorghum

in Functional and Applied Plant Genomics

Huiting Min
Kang Wang
Tiantian Wang
Xinxiu Cheng
Ephrem Habyarimana
Yongfei Wang
Die Hu
Yi-Hong Wang
Lihua Wang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1629615

116 views

Original Research

Published on 30 Jun 2025

Mapping QTLs for Pyricularia leaf spot, nematode resistance, and yield related traits in pearl millet [Cenchrus americanus (L.) Morrone]

in Functional and Applied Plant Genomics

Sairam Vutla
Joseph E. Knoll
Anvesh Sankuratri
Risha G. Nayak
Limei Liu
Peng W. Chee
Raghupathy Karthikeyan
Bashasab Fakrudin
Mahendar Thudi
Patricia Timper

Frontiers in Plant Science

doi 10.3389/fpls.2025.1588485

441 views

Original Research

Published on 30 Jun 2025

Mitochondrial genome assembly and comparative analysis of decaploid Camellia hainanica

in Functional and Applied Plant Genomics

Shihui Zhang
Yuyan Zhang
Sheng Luo
Jie Gao
Haiyan Hu
Jinping Liu
Wenqiang Wu
Jian Wang
Xiaolong Huang
Hangui Lai

Frontiers in Plant Science

doi 10.3389/fpls.2025.1556379

323 views

Editorial

Published on 27 Jun 2025

Editorial: Genetic resources and conservation strategies for neotropical plant biodiversity

in Functional and Applied Plant Genomics

Enéas Ricardo Konzen
Miklos Maximiliano Bajay
Jorge Carlos Berny Mier y Teran
Marcos Vinícius Bohrer Monteiro Siqueira

Frontiers in Plant Science

doi 10.3389/fpls.2025.1629546

360 views

Original Research

Accepted on 26 Jun 2025

SaGP: identifying plant saline-alkali tolerance genes based on machine learning techniques

in Functional and Applied Plant Genomics

Baixue Qiao
Wentao Gao
Xudong Zhang
Min Du
Xuanrui Liu
Shaozi Pang
Chunxue Yang
Jiang Wang
Yuming Zhao
Linan Xie

Frontiers in Plant Science

doi 10.3389/fpls.2025.1629794

115 views

Original Research

Accepted on 26 Jun 2025

Gh_FBL43 regulates the resistance of Gossypium hirsutum to Verticillium wilt through jasmonic acid and flavonoid-related pathways

in Functional and Applied Plant Genomics

Jieyin Zhao
Xuening Su
GAO Wenju
Tingwei Wang
Yuxiang Wang
Quanjia Chen
Yanying Qu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1620947

109 views

Original Research

Published on 25 Jun 2025

Improving Soybean Seed Sucrose Content using TILLING by Sequencing Analyses of The Soybean Sucrose Synthase Gene Family

in Functional and Applied Plant Genomics

Dounya Knizia
Erdem Anil
Yasser Salhi
Haiying Shi
Abdelhalim El Baze
My Abdelmajid Kassem
Naoufal Lakhssassi
Henry T. Nguyen
Khalid Meksem

Frontiers in Plant Science

doi 10.3389/fpls.2025.1606321

508 views

Original Research

Published on 25 Jun 2025

Identification of DNA N6-methyladenine modifications in the rice genome with a fine-tuned large language model

in Functional and Applied Plant Genomics

Yichi Zhang
Hao Chen
Shicheng Xiang
Zhibin Lv

Frontiers in Plant Science

doi 10.3389/fpls.2025.1626539

294 views

Original Research

Accepted on 23 Jun 2025

Conservation and Valorization of Italian Potato Biodiversity Through Genotype-By-Sequencing (GBS)

in Functional and Applied Plant Genomics

Matteo Martina
Roberto Natale
Edoardo Vergnano
Anna Milani
Stefano Biricolti
Luisa Andrenelli
Ezio Portis

Frontiers in Plant Science

doi 10.3389/fpls.2025.1629306

142 views