Frontiers in Plant Science | Plant Bioinformatics

Original Research

Published on 07 Mar 2024

Full-length transcriptome sequencing provides insights into alternative splicing under cold stress in peanut

in Plant Bioinformatics

Xin Wang
Yue Liu
Lei Ouyang
Ruonan Yao
Tingting Yu
Liying Yan
Yuning Chen
Dongxin Huai
Xiaojing Zhou
Zhihui Wang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1362277

4,679 views
7 citations

Original Research

Published on 06 Mar 2024

High-throughput UAV-based rice panicle detection and genetic mapping of heading-date-related traits

in Plant Bioinformatics

Rulei Chen
Hengyun Lu
Yongchun Wang
Qilin Tian
Congcong Zhou
Ahong Wang
Qi Feng
Songfu Gong
Qiang Zhao
Bin Han

Frontiers in Plant Science

doi 10.3389/fpls.2024.1327507

5,027 views
10 citations

Original Research

Published on 05 Mar 2024

Identification of molecular markers and candidate regions associated with grain number per spike in Pubing3228 using SLAF-BSA

in Plant Bioinformatics

Jiansheng Wang
Erwei Wang
Shiping Cheng
Aichu Ma

Frontiers in Plant Science

doi 10.3389/fpls.2024.1361621

2,563 views
5 citations

Original Research

Published on 05 Mar 2024

Plant necrotrophic bacterial disease resistance phenotypes, QTL, and metabolites identified through integrated genetic mapping and metabolomics in Solanum species

in Plant Bioinformatics

Janak R. Joshi
Dev Paudel
Ethan Eddy
Amy O. Charkowski
Adam L. Heuberger

Frontiers in Plant Science

doi 10.3389/fpls.2024.1336513

3,340 views
3 citations

Original Research

Published on 05 Mar 2024

A de novo chromosome-scale assembly of the Lablab purpureus genome

in Plant Bioinformatics

Wirulda Pootakham
Prakit Somta
Wasitthee Kongkachana
Chaiwat Naktang
Chutima Sonthirod
Sonicha U-Thoomporn
Thippawan Yoocha
Poompat Phadphon
Sithichoke Tangphatsornruang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1347744

3,716 views
2 citations

Editorial

Published on 27 Feb 2024

Editorial: Advances on genomics and genetics of horticultural crops and their contribution to breeding efforts - volume II

in Plant Bioinformatics

Eleni Tani
Aliki Xanthopoulou
Christos Bazakos

Frontiers in Plant Science

doi 10.3389/fpls.2024.1385217

1,901 views

Original Research

Published on 21 Feb 2024

Soil and seed both influence bacterial diversity in the microbiome of the Cannabis sativa seedling endosphere

in Plant Bioinformatics

Christopher R. Dumigan
Michael K. Deyholos

Frontiers in Plant Science

doi 10.3389/fpls.2024.1326294

4,835 views
12 citations

Original Research

Published on 20 Feb 2024

Wolfberry genome database: integrated genomic datasets for studying molecular biology

in Plant Bioinformatics

You-Long Cao
You-Yi Chen
Yan-Long Li
Chung-I Li
Shao-Ting Lin
Bing-Ru Lee
Chun-Lin Hsieh
Yu-Yun Hsiao
Yun-Fang Fan
Qing Luo

Frontiers in Plant Science

doi 10.3389/fpls.2024.1310346

12,350 views
4 citations

Original Research

Published on 20 Feb 2024

Plant virus diversity in bee and pollen samples from apple (Malus domestica) and sweet cherry (Prunus avium) agroecosystems

in Plant Bioinformatics

Malek Smadi
Eunseo Lee
James Phelan
Aiming Wang
Guillaume J. Bilodeau
Stephen F. Pernal
M. Marta Guarna
Mike Rott
Jonathan S. Griffiths

Frontiers in Plant Science

doi 10.3389/fpls.2024.1335281

5,650 views
5 citations

Original Research

Published on 16 Feb 2024

Transcriptome and volatile compounds analyses of floral development provide insight into floral scent formation in Paeonia lactiflora ‘Wu Hua Long Yu’

in Plant Bioinformatics

Qian Zhao
Min Zhang
Lina Gu
Zihan Yang
Yuqing Li
Jianrang Luo
Yanlong Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1303156

4,453 views
19 citations

Original Research

Published on 15 Feb 2024

The effect of phytosulfokine alpha on haploid embryogenesis and gene expression of Brassica napus microspore cultures

in Plant Bioinformatics

Špela Mestinšek Mubi
Urban Kunej
Valentin Vogrinčič
Jernej Jakše
Jana Murovec

Frontiers in Plant Science

doi 10.3389/fpls.2024.1336519

4,727 views
10 citations

Original Research

Published on 12 Feb 2024

ZjHXK5 and ZjHXK6 negatively regulate the sugar metabolism of Ziziphus jujuba Mill.

in Plant Bioinformatics

Panpan Tong
Guanglian Liao
Dengyang Lu
Xiaofeng Zhou
Wang Zhang
Qiang Xu
Cuiyun Wu
Jiangbo Wang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1335120

3,400 views
4 citations

Editorial

Published on 09 Feb 2024

Editorial: Recent advances in big data, machine, and deep learning for precision agriculture

in Plant Bioinformatics

Marcin Woźniak
Muhammad Fazal Ijaz

Frontiers in Plant Science

doi 10.3389/fpls.2024.1367538

5,054 views
13 citations

Original Research

Published on 07 Feb 2024

Enhancing transcriptome analysis in medicinal plants: multiple unigene sets in Astragalus membranaceus

in Plant Bioinformatics

Ji-Nam Kang
Mok Hur
Chang-Kug Kim
So-Hee Yang
Si-Myung Lee

Frontiers in Plant Science

doi 10.3389/fpls.2024.1301526

3,885 views
1 citation

Editorial

Published on 02 Feb 2024

Editorial: Multi-omics and computational biology in horticultural plants: from genotype to phenotype, volume II

in Plant Bioinformatics

Yunpeng Cao
Xiaoxu Li
Hui Song
Muhammad Abdullah
Muhammad Aamir Manzoor

Frontiers in Plant Science

doi 10.3389/fpls.2024.1368909

3,234 views
3 citations

Mini Review

Published on 02 Feb 2024

Unraveling crop enzymatic browning through integrated omics

in Plant Bioinformatics

Chunkai Wang
Lin Meng
Guochao Zhang
Xiujun Yang
Bingwen Pang
Junjie Cheng
Bing He
Fushan Sun

Frontiers in Plant Science

doi 10.3389/fpls.2024.1342639

9,018 views
22 citations

Original Research

Published on 01 Feb 2024

The functional decline of tomato plants infected by Candidatus Liberbacter solanacearum: an RNA-seq transcriptomic analysis

in Plant Bioinformatics

Jiacheng Chuan
Jingbai Nie
William Rodney Cooper
Wen Chen
Lawrence Hale
Xiang Li

Frontiers in Plant Science

doi 10.3389/fpls.2024.1325254

3,573 views

Original Research

Published on 25 Jan 2024

Comprehensive phenomic and genomic studies of the species, Pectobacterium cacticida and proposal for reclassification as Alcorniella cacticida comb. nov

in Plant Bioinformatics

Joanna Jonca
Minna Pirhonen
Michal Mateusz Waleron
Jan Gawor
Agnieszka Mrozik
Magdalena Smoktunowicz
Krzysztof Waleron
Malgorzata Waleron

Frontiers in Plant Science

doi 10.3389/fpls.2024.1323790

4,340 views
4 citations

Editorial

Published on 24 Jan 2024

Editorial: Molecular ecology of plant sexual reproduction

in Plant Bioinformatics

Yuan-Wen Duan
Ming-Xun Ren
Yan-Bing Gong
Bin Tian
Juli Caujapé-Castells

Frontiers in Plant Science

doi 10.3389/fpls.2024.1362777

2,181 views

Methods

Published on 23 Jan 2024

SGR-YOLO: a method for detecting seed germination rate in wild rice

in Plant Bioinformatics

Qiong Yao
Xiaoming Zheng
Guomin Zhou
Jianhua Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2023.1305081

5,792 views
25 citations

Original Research

Published on 18 Jan 2024

Comparison of the transcriptome and metabolome of wheat (Triticum aestivum L.) proteins content during grain formation provides insight

in Plant Bioinformatics

Jia Shi
Lihong Wang
Zhong Wang
Jianfeng Li
Hongzhi Zhang
Xin Gao
Chunsheng Wang
Jianqiang Xia
Zhun Zhao
Zhenlong Wang

Frontiers in Plant Science

doi 10.3389/fpls.2023.1309678

3,540 views
2 citations

Original Research

Published on 17 Jan 2024

KASP-IEva: an intelligent typing evaluation model for KASP primers

in Plant Bioinformatics

Xiaojing Chen
Longyu Huang
Jingchao Fan
Shen Yan
Guomin Zhou
Jianhua Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2023.1293599

3,381 views
6 citations

Original Research

Published on 15 Jan 2024

Influence of plant species, mycorrhizal inoculant, and soil phosphorus level on arbuscular mycorrhizal communities in onion and carrot roots

in Plant Bioinformatics

Umbrin Ilyas
Lindsey J. du Toit
Mehrdad Hajibabaei
Mary Ruth McDonald

Frontiers in Plant Science

doi 10.3389/fpls.2023.1324626

4,730 views
10 citations

Original Research

Published on 10 Jan 2024

Genome-wide identification and expression profiles analysis of the authentic response regulator gene family in licorice

in Plant Bioinformatics

Yanping Shi
Guohua Ding
Haitao Shen
Zihan Li
Hongbin Li
Guanghui Xiao

Frontiers in Plant Science

doi 10.3389/fpls.2023.1309802

3,172 views
5 citations

798 articles

articles

Full-length transcriptome sequencing provides insights into alternative splicing under cold stress in peanut

High-throughput UAV-based rice panicle detection and genetic mapping of heading-date-related traits

Identification of molecular markers and candidate regions associated with grain number per spike in Pubing3228 using SLAF-BSA

Plant necrotrophic bacterial disease resistance phenotypes, QTL, and metabolites identified through integrated genetic mapping and metabolomics in Solanum species

A de novo chromosome-scale assembly of the Lablab purpureus genome

Editorial: Advances on genomics and genetics of horticultural crops and their contribution to breeding efforts - volume II

Soil and seed both influence bacterial diversity in the microbiome of the Cannabis sativa seedling endosphere

Wolfberry genome database: integrated genomic datasets for studying molecular biology

Plant virus diversity in bee and pollen samples from apple (Malus domestica) and sweet cherry (Prunus avium) agroecosystems

Transcriptome and volatile compounds analyses of floral development provide insight into floral scent formation in Paeonia lactiflora ‘Wu Hua Long Yu’

The effect of phytosulfokine alpha on haploid embryogenesis and gene expression of Brassica napus microspore cultures

ZjHXK5 and ZjHXK6 negatively regulate the sugar metabolism of Ziziphus jujuba Mill.

Editorial: Recent advances in big data, machine, and deep learning for precision agriculture

Enhancing transcriptome analysis in medicinal plants: multiple unigene sets in Astragalus membranaceus

Editorial: Multi-omics and computational biology in horticultural plants: from genotype to phenotype, volume II

Unraveling crop enzymatic browning through integrated omics

The functional decline of tomato plants infected by Candidatus Liberbacter solanacearum: an RNA-seq transcriptomic analysis

Comprehensive phenomic and genomic studies of the species, Pectobacterium cacticida and proposal for reclassification as Alcorniella cacticida comb. nov

Editorial: Molecular ecology of plant sexual reproduction

SGR-YOLO: a method for detecting seed germination rate in wild rice

Comparison of the transcriptome and metabolome of wheat (Triticum aestivum L.) proteins content during grain formation provides insight

KASP-IEva: an intelligent typing evaluation model for KASP primers

Influence of plant species, mycorrhizal inoculant, and soil phosphorus level on arbuscular mycorrhizal communities in onion and carrot roots

Genome-wide identification and expression profiles analysis of the authentic response regulator gene family in licorice