Frontiers in Plant Science | Plant Bioinformatics

Original Research

Published on 09 Sep 2025

Exploring the plastome diversity of fifteen centuries-old olive trees (Oleae europaea L.) from Jordan: insights and implications for conservation

in Plant Bioinformatics

Nunzio D’Agostino
Ivan Fruggiero
Alessandro Maisto
Francesca Taranto
Mazen A. Al-Kilani
Ayed M. Al-Abdallat

Frontiers in Plant Science

doi 10.3389/fpls.2025.1647776

2,052 views

Original Research

Published on 09 Sep 2025

Genome-wide identification of the COBRA-like gene family and expression pattern analysis under abiotic stresses of Sorghum bicolor (L.)

in Plant Bioinformatics

Shipeng Liu
Shuang Liang
Tingrui Jing
Xinyi Guo
Hairuo Wang
Quan Ma
Junshen Wang
Kai Wang
Xiaolong He
Haibing Zhao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1652613

2,019 views

Original Research

Published on 08 Sep 2025

Mechanistic insights into the diuretic activity of sugarcane leaf extract using untargeted metabolomics and bioinformatics

in Plant Bioinformatics

Xianglong Pan
Erwei Hao
Jinling Xie
Pei Ling Tang
Juan Wen
Zhengcai Du
Jiagang Deng
Xiaotao Hou

Frontiers in Plant Science

doi 10.3389/fpls.2025.1652526

2,710 views

Original Research

Published on 08 Sep 2025

Genome-wide analysis of RWP-RK transcription factor family reveals its roles in nitrogen response in rice (Oryza sativa)

in Plant Bioinformatics

Mei Du
Ziwen Guo
Siyu Gong
Liangwei Xu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1597029

2,236 views

Original Research

Published on 05 Sep 2025

Phylogenetic classification and genetic insights from the complete mitochondrial genome of Medicago ruthenica

in Plant Bioinformatics

Yonglei Tian
Zinian Wu
Chunyu Tian
Yanting Yang
Zhiyong Li

Frontiers in Plant Science

doi 10.3389/fpls.2025.1648505

2,863 views
1 citation

Original Research

Published on 02 Sep 2025

Integrated transcriptomic and metabolomic analyses elucidate the regulatory role of SlBEL11 in tomato fruit ripening

in Plant Bioinformatics

Xiufen Dong
Jie Lu
Yun Guo
Qihan Zhang
Qin Yang
Jingyi Peng
Li Tian

Frontiers in Plant Science

doi 10.3389/fpls.2025.1666515

2,254 views

Original Research

Published on 01 Sep 2025

Assessment of potential habitat suitability for kiwifruit (Actinidia spp) in Shaanxi Province under climate change scenarios

in Plant Bioinformatics

Zhen Niu
Dong Han
Zijie Niu
Petros A. Roussos
Tao Cheng
Jiyuan Xie
Geni Cao
Dandan Liu
Ning Jin
Dongyan Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1617802

2,183 views
1 citation

Original Research

Published on 01 Sep 2025

Genome-wide identification and expression analyses of the LRR-RLK gene family in Actinidia chinensis

in Plant Bioinformatics

Chang Li
Shengwei Ma
Yulong Tian
Xiaojuan Zheng

Frontiers in Plant Science

doi 10.3389/fpls.2025.1577679

2,306 views

Original Research

Published on 01 Sep 2025

Analysis of maize PAL pan gene family and expression pattern under lepidopteran insect stress

in Plant Bioinformatics

Tonghan Wang
Yaohui Zheng
Lu Sun
Minghui Guan
Ying Hu
Haibing Yu
Degong Wu
Junli Du

Frontiers in Plant Science

doi 10.3389/fpls.2025.1651563

2,400 views
1 citation

Original Research

Published on 28 Aug 2025

Structural and functional insights into NAD(P)H-quinone oxidoreductases in lavender: implications for abiotic stress tolerance and essential oil production

in Plant Bioinformatics

Dafeng Liu
Na Li
Huashui Deng
Daoqi Song
Minawaier Maimaiti
Ayidana Nuerbieke
Mingtai Yekepeng
Kailibinuer Aili

Frontiers in Plant Science

doi 10.3389/fpls.2025.1661227

2,363 views
2 citations

Brief Research Report

Published on 28 Aug 2025

The chloroplast genome elucidates the origin of mulberry in Central Asia

in Plant Bioinformatics

Caihui Wang
Yutian Yang
Lu Yang
Xue Ling
Zhikun Ma
Tongqian Zou
Jian Ma
Ming Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1592308

2,109 views

Original Research

Published on 28 Aug 2025

Global analysis of transcription factors using both the reference genome and the multi-transcriptome of Akebia trifoliata reveals a sophisticated functional strategy

in Plant Bioinformatics

Hao Yang
Jie Li
Shengfu Zhong
Huai Yang
Rui Han
Xiaoxiao Yi
Xueying Li
Peigao Luo

Frontiers in Plant Science

doi 10.3389/fpls.2025.1529326

2,016 views

Original Research

Published on 25 Aug 2025

YOLOv10-kiwi: a YOLOv10-based lightweight kiwifruit detection model in trellised orchards

in Plant Bioinformatics

Jie Ren
Wendong Wang
Yuan Tian
Jinrong He

Frontiers in Plant Science

doi 10.3389/fpls.2025.1616165

1,937 views
2 citations

Original Research

Published on 21 Aug 2025

Real-time and resource-efficient banana bunch detection and localization with YOLO-BRFB on edge devices

in Plant Bioinformatics

Shuo Wang
Lijiao Wei
Danran Zhang
Ling Chen
Weihua Huang
Dongjie Du
Kangmin Lin
Zhenhui Zheng
Jieli Duan

Frontiers in Plant Science

doi 10.3389/fpls.2025.1650012

2,142 views
1 citation

Original Research

Published on 19 Aug 2025

BioVizSeq: an R package for visualization the element on bio-sequences

in Plant Bioinformatics

Shiqi Zhao
Runqi Zhang
Maoqiu He
Bonian Shui
Yu Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1645004

1,449 views

Original Research

Published on 19 Aug 2025

Identification of chalcone isomerase gene family in Astragalus mongholicus revealed genes regulating isoflavone synthesis

in Plant Bioinformatics

Zhen Wang
Panpan Wang
Xinxin Wang
Lingyang Kong
Jianhao Wu
Weichao Ren
Xiubo Liu
Wei Ma

Frontiers in Plant Science

doi 10.3389/fpls.2025.1612434

1,929 views

Original Research

Published on 19 Aug 2025

Comparative genomics and synteny analysis of PP2C phosphatases in modern and wild sugarcane cultivars for insights into abiotic stress response

in Plant Bioinformatics

Shweta Kumari
R. K. Harshavardhini
Nandhini Murugan
S. Keerthana
Aispriya
Vinayaka
Anitha Ramaswamy
Jeyakumar Prabhakaran
Manimekalai Ramaswamy

Frontiers in Plant Science

doi 10.3389/fpls.2025.1596800

2,221 views
1 citation

Review

Published on 07 Aug 2025

WRKY transcription factors participate in abiotic stress responses mediated by sugar metabolism

in Plant Bioinformatics

XueYi Zhang
WanXia Liu
YiAn Yin
Jia Zheng
JianAn Li
XiaoFeng Tan
LingLi Wu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1646357

3,607 views
3 citations

Original Research

Published on 07 Aug 2025

CropPhenoX: high-throughput automatic extraction system for wheat seedling phenotypic traits based on software and hardware collaboration

in Plant Bioinformatics

Jinxing Wang
Baohua Yang
Pengfei Wang
Runchao Chen
Hongbo Zhi
Zhiyuan Duan

Frontiers in Plant Science

doi 10.3389/fpls.2025.1650229

2,317 views

Original Research

Published on 04 Aug 2025

Genome-wide identification and comprehensive characterization of the ADF gene family in Triticum monococcum L. subsp. aegilopoides with insights into structure, evolution and cold stress response

in Plant Bioinformatics

Xin Liu
Minghu Zhang
Jian Su
Lei Wu
Mang Shen
Qi Wang
Yamei Zhuang
Lianquan Zhang
Haosheng Li
Gang Chen

Frontiers in Plant Science

doi 10.3389/fpls.2025.1649202

2,341 views

Original Research

Published on 01 Aug 2025

Attention-enhanced hybrid deep learning model for robust mango leaf disease classification via ConvNeXt and vision transformer fusion

in Plant Bioinformatics

Ebru Ergün

Frontiers in Plant Science

doi 10.3389/fpls.2025.1638520

3,051 views
2 citations

Original Research

Published on 30 Jul 2025

Slim-sugarcane: a lightweight and high-precision method for sugarcane node detection and edge deployment in natural environments

in Plant Bioinformatics

Lijiao Wei
Shuo Wang
Xinwei Liang
Dongjie Du
Xinyi Huang
Ming Li
Yuangang Hua
Weihua Huang
Zhenhui Zheng

Frontiers in Plant Science

doi 10.3389/fpls.2025.1643967

1,896 views

Original Research

Published on 23 Jul 2025

Drought-induced transposon expression reveals complex drought response mechanisms in Brassica napus

in Plant Bioinformatics

Manyi Chen
Dan Luo
Hanzhao Kong
Yan Lv
Chunsheng Li
Yongguo Zhao
Qian Huang
Guangyuan Lu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1614169

2,772 views

Original Research

Published on 17 Jul 2025

Automatic detection of lucky bamboo nodes based on Improved YOLOv7

in Plant Bioinformatics

Jing Zhang
Ruoling Deng
Chengzhi Cai
Erpeng Zou
Haitao Liu
Mingxin Hou
Xinzhi Chen
Huamin Lin
Zhenye Wei

Frontiers in Plant Science

doi 10.3389/fpls.2025.1604514

2,422 views
1 citation

796 articles

articles

Exploring the plastome diversity of fifteen centuries-old olive trees (Oleae europaea L.) from Jordan: insights and implications for conservation

Genome-wide identification of the COBRA-like gene family and expression pattern analysis under abiotic stresses of Sorghum bicolor (L.)

Mechanistic insights into the diuretic activity of sugarcane leaf extract using untargeted metabolomics and bioinformatics

Genome-wide analysis of RWP-RK transcription factor family reveals its roles in nitrogen response in rice (Oryza sativa)

Phylogenetic classification and genetic insights from the complete mitochondrial genome of Medicago ruthenica

Integrated transcriptomic and metabolomic analyses elucidate the regulatory role of SlBEL11 in tomato fruit ripening

Assessment of potential habitat suitability for kiwifruit (Actinidia spp) in Shaanxi Province under climate change scenarios

Genome-wide identification and expression analyses of the LRR-RLK gene family in Actinidia chinensis

Analysis of maize PAL pan gene family and expression pattern under lepidopteran insect stress

Structural and functional insights into NAD(P)H-quinone oxidoreductases in lavender: implications for abiotic stress tolerance and essential oil production

The chloroplast genome elucidates the origin of mulberry in Central Asia

Global analysis of transcription factors using both the reference genome and the multi-transcriptome of Akebia trifoliata reveals a sophisticated functional strategy

YOLOv10-kiwi: a YOLOv10-based lightweight kiwifruit detection model in trellised orchards

Real-time and resource-efficient banana bunch detection and localization with YOLO-BRFB on edge devices

BioVizSeq: an R package for visualization the element on bio-sequences

Identification of chalcone isomerase gene family in Astragalus mongholicus revealed genes regulating isoflavone synthesis

Comparative genomics and synteny analysis of PP2C phosphatases in modern and wild sugarcane cultivars for insights into abiotic stress response

WRKY transcription factors participate in abiotic stress responses mediated by sugar metabolism

CropPhenoX: high-throughput automatic extraction system for wheat seedling phenotypic traits based on software and hardware collaboration

Genome-wide identification and comprehensive characterization of the ADF gene family in Triticum monococcum L. subsp. aegilopoides with insights into structure, evolution and cold stress response

Attention-enhanced hybrid deep learning model for robust mango leaf disease classification via ConvNeXt and vision transformer fusion

Slim-sugarcane: a lightweight and high-precision method for sugarcane node detection and edge deployment in natural environments

Drought-induced transposon expression reveals complex drought response mechanisms in Brassica napus

Automatic detection of lucky bamboo nodes based on Improved YOLOv7