Frontiers in Plant Science | Plant Genetics, Epigenetics and Chromosome Biology

Original Research

Published on 22 Mar 2024

Comparing genetic differentiation and variation using ISSR and SCoT among Juniper plant markers in Saudi Arabia

in Plant Genetics, Epigenetics and Chromosome Biology

Hatim M. Al-Yasi
Rahmah Al-Qthanin

Frontiers in Plant Science

doi 10.3389/fpls.2024.1356917

4,107 views
12 citations

Original Research

Published on 21 Mar 2024

SPT6L, a newly discovered ancestral component of the plant RNA-directed DNA methylation pathway

in Plant Genetics, Epigenetics and Chromosome Biology

Vojtěch Čermák
Tomáš Kašpar
Lukáš Fischer

Frontiers in Plant Science

doi 10.3389/fpls.2024.1372880

3,712 views
1 citation

Original Research

Published on 21 Mar 2024

The MADS-box genes SOC1 and AGL24 antagonize XAL2 functions in Arabidopsis thaliana root development

in Plant Genetics, Epigenetics and Chromosome Biology

Claudio A. Castañón-Suárez
Maite Arrizubieta
Natalia Castelán-Muñoz
Diana Belén Sánchez-Rodríguez
Carolina Caballero-Cordero
Estephania Zluhan-Martínez
Sandra C. Patiño-Olvera
J.Arturo Arciniega-González
Berenice García-Ponce
María de la Paz Sánchez

Frontiers in Plant Science

doi 10.3389/fpls.2024.1331269

10,520 views
13 citations

Original Research

Published on 19 Feb 2024

Comparative transcriptomic analysis reveals the molecular mechanism underlying seedling heterosis and its relationship with hybrid contemporary seeds DNA methylation in soybean

in Plant Genetics, Epigenetics and Chromosome Biology

Xiaobo Ren
Liangyu Chen
Lin Deng
Qiuzhu Zhao
Dan Yao
Xueying Li
Weixuan Cong
Zhenyuan Zang
Dingyi Zhao
Miao Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1364284

3,739 views
5 citations

Original Research

Published on 08 Feb 2024

Regulatory mechanism of heat-active retrotransposons by the SET domain protein SUVH2

in Plant Genetics, Epigenetics and Chromosome Biology

Xiaoying Niu
Zhiyu Ge
Hidetaka Ito

Frontiers in Plant Science

doi 10.3389/fpls.2024.1355626

3,565 views
4 citations

Original Research

Published on 29 Jan 2024

TaRECQ4 contributes to maintain both homologous and homoeologous recombination during wheat meiosis

in Plant Genetics, Epigenetics and Chromosome Biology

Jeanne Bazile
Isabelle Nadaud
Pauline Lasserre-Zuber
Jonathan Kitt
Romain De Oliveira
Frédéric Choulet
Pierre Sourdille

Frontiers in Plant Science

doi 10.3389/fpls.2023.1342976

4,318 views
9 citations

Original Research

Published on 19 Jan 2024

Plasticity of parental CENH3 incorporation into the centromeres in wheat × barley F1 hybrids

in Plant Genetics, Epigenetics and Chromosome Biology

Edit Mihók
Dávid Polgári
Andrea Lenykó-Thegze
Diána Makai
Attila Fábián
Mohammad Ali
András Kis
Adél Sepsi
László Sági

Frontiers in Plant Science

doi 10.3389/fpls.2024.1324817

3,774 views
2 citations

Original Research

Published on 08 Jan 2024

Polyphenol oxidase genes in barley (Hordeum vulgare L.): functional activity with respect to black grain pigmentation

in Plant Genetics, Epigenetics and Chromosome Biology

Anastasiia Y. Glagoleva
Tat’jana V. Kukoeva
Elena K. Khlestkina
Olesya Y. Shoeva

Frontiers in Plant Science

doi 10.3389/fpls.2023.1320770

3,569 views
4 citations

Original Research

Published on 04 Jan 2024

Assessing the genetic integrity of sugarcane germplasm in the USDA-ARS National Plant Germplasm System collection using single-dose SNP markers

in Plant Genetics, Epigenetics and Chromosome Biology

Sunchung Park
Dapeng Zhang
Gul Shad Ali

Frontiers in Plant Science

doi 10.3389/fpls.2023.1337736

4,536 views
9 citations

Review

Published on 04 Jan 2024

Transposable elements: multifunctional players in the plant genome

in Plant Genetics, Epigenetics and Chromosome Biology

Asmaa H. Hassan
Morad M. Mokhtar
Achraf El Allali

Frontiers in Plant Science

doi 10.3389/fpls.2023.1330127

16,998 views
46 citations

Data Report

Published on 23 Nov 2023

The interactome of histone deacetylase HDA19 in dark-grown Arabidopsis seedlings

in Plant Genetics, Epigenetics and Chromosome Biology

Isabel Cristina Vélez-Bermúdez
Wolfgang Schmidt

Frontiers in Plant Science

doi 10.3389/fpls.2023.1296767

2,653 views
2 citations

Editorial

Published on 23 Nov 2023

Editorial: Exploring the genetic potential of Thinopyrum species in wheat and durum wheat improvement

in Plant Genetics, Epigenetics and Chromosome Biology

Edina Türkösi
Klaudia Kruppa
Mahmoud Said

Frontiers in Plant Science

doi 10.3389/fpls.2023.1332662

1,759 views
1 citation

Original Research

Published on 16 Nov 2023

Cold stress induces differential gene expression of retained homeologs in Camelina sativa cv Suneson

in Plant Genetics, Epigenetics and Chromosome Biology

Chao Fang
John P. Hamilton
Brieanne Vaillancourt
Yi-Wen Wang
Joshua C. Wood
Natalie C. Deans
Taylor Scroggs
Lemor Carlton
Kathrine Mailloux
David S. Douches

Frontiers in Plant Science

doi 10.3389/fpls.2023.1271625

4,653 views
12 citations

Original Research

Published on 15 Nov 2023

The unequal functional redundancy of Arabidopsis INCURVATA11 and CUPULIFORMIS2 is not dependent on genetic background

in Plant Genetics, Epigenetics and Chromosome Biology

Riad Nadi
Lucía Juan-Vicente
Eduardo Mateo-Bonmatí
José Luis Micol

Frontiers in Plant Science

doi 10.3389/fpls.2023.1239093

2,951 views
4 citations

Original Research

Published on 09 Nov 2023

Exploring the genetic landscape of nitrogen uptake in durum wheat: genome-wide characterization and expression profiling of NPF and NRT2 gene families

in Plant Genetics, Epigenetics and Chromosome Biology

Guglielmo Puccio
Rosolino Ingraffia
Dario Giambalvo
Alfonso S. Frenda
Alex Harkess
Francesco Sunseri
Francesco Mercati

Frontiers in Plant Science

doi 10.3389/fpls.2023.1302337

3,664 views
4 citations

Original Research

Published on 04 Sep 2023

Development of genomic resources for Rhodes grass (Chloris gayana), draft genome and annotated variant discovery

in Plant Genetics, Epigenetics and Chromosome Biology

Kellie Maybery-Reupert
Daniel Isenegger
Matthew Hayden
Noel Cogan

Frontiers in Plant Science

doi 10.3389/fpls.2023.1239290

3,785 views
7 citations

Original Research

Published on 14 Aug 2023

Long read transcriptome sequencing of a sugarcane hybrid and its progenitors, Saccharum officinarum and S. spontaneum

in Plant Genetics, Epigenetics and Chromosome Biology

Prathima Perumal Thirugnanasambandam
Avinash Singode
Lakshmi Pathy Thalambedu
Selvi Athiappan
Mohanraj Krishnasamy
Sobhakumari Valiya Purakkal
Hemaprabha Govind
Agnelo Furtado
Robert Henry

Frontiers in Plant Science

doi 10.3389/fpls.2023.1199748

3,967 views
4 citations

Original Research

Published on 02 Aug 2023

A first look at the ability to use genomic prediction for improving the ratooning ability of sugarcane

in Plant Genetics, Epigenetics and Chromosome Biology

Md. Sariful Islam
Keo Corak
Per McCord
Amanda M. Hulse-Kemp
Alexander E. Lipka

Frontiers in Plant Science

doi 10.3389/fpls.2023.1205999

3,295 views
11 citations

Original Research

Published on 14 Jul 2023

Major transcriptomic differences are induced by warmer temperature conditions experienced during asexual and sexual reproduction in Fragaria vesca ecotypes

in Plant Genetics, Epigenetics and Chromosome Biology

Yupeng Zhang
Marcos Viejo
Igor Yakovlev
Torstein Tengs
Paal Krokene
Timo Hytönen
Paul E. Grini
Carl Gunnar Fossdal

Frontiers in Plant Science

doi 10.3389/fpls.2023.1213311

3,531 views
5 citations

Original Research

Published on 28 Jun 2023

Development of Omni InDel and supporting database for maize

in Plant Genetics, Epigenetics and Chromosome Biology

Zhihao Liu
Yikun Zhao
Yunlong Zhang
Liwen Xu
Ling Zhou
Weiguang Yang
Han Zhao
Jiuran Zhao
Fengge Wang

Frontiers in Plant Science

doi 10.3389/fpls.2023.1216505

2,636 views
2 citations

Original Research

Published on 22 Jun 2023

Allelic expression of AhNSP2-B07 due to parent of origin affects peanut nodulation

in Plant Genetics, Epigenetics and Chromosome Biology

Zifan Zhao
Yichun Wang
Ze Peng
Ziliang Luo
Meixia Zhao
Jianping Wang

Frontiers in Plant Science

doi 10.3389/fpls.2023.1193465

3,378 views

Review

Published on 30 May 2023

Exploring the crop epigenome: a comparison of DNA methylation profiling techniques

in Plant Genetics, Epigenetics and Chromosome Biology

Dolores Rita Agius
Aliki Kapazoglou
Evangelia Avramidou
Miroslav Baranek
Elena Carneros
Elena Caro
Stefano Castiglione
Angela Cicatelli
Aleksandra Radanovic
Jean-Paul Ebejer

Frontiers in Plant Science

doi 10.3389/fpls.2023.1181039

15,078 views
40 citations

Original Research

Published on 26 Apr 2023

BOS1 is a basic helix–loop–helix transcription factor involved in regulating panicle development in rice

in Plant Genetics, Epigenetics and Chromosome Biology

Yanpeng Lv
Xinfeng Zhang
Yanjuan Hu
Shuang Liu
Yanbin Yin
Xiaoxue Wang

Frontiers in Plant Science

doi 10.3389/fpls.2023.1162828

3,931 views
8 citations

Original Research

Published on 17 Apr 2023

Domesticating Vigna stipulacea: Chromosome-Level genome assembly reveals VsPSAT1 as a candidate gene decreasing hard-seededness

in Plant Genetics, Epigenetics and Chromosome Biology

Yu Takahashi
Hiroaki Sakai
Hirotaka Ariga
Shota Teramoto
Takashi L. Shimada
Heesoo Eun
Chiaki Muto
Ken Naito
Norihiko Tomooka

Frontiers in Plant Science

doi 10.3389/fpls.2023.1119625

4,384 views
8 citations

112 articles

articles

Comparing genetic differentiation and variation using ISSR and SCoT among Juniper plant markers in Saudi Arabia

SPT6L, a newly discovered ancestral component of the plant RNA-directed DNA methylation pathway

The MADS-box genes SOC1 and AGL24 antagonize XAL2 functions in Arabidopsis thaliana root development

Comparative transcriptomic analysis reveals the molecular mechanism underlying seedling heterosis and its relationship with hybrid contemporary seeds DNA methylation in soybean

Regulatory mechanism of heat-active retrotransposons by the SET domain protein SUVH2

TaRECQ4 contributes to maintain both homologous and homoeologous recombination during wheat meiosis

Plasticity of parental CENH3 incorporation into the centromeres in wheat × barley F1 hybrids

Polyphenol oxidase genes in barley (Hordeum vulgare L.): functional activity with respect to black grain pigmentation

Assessing the genetic integrity of sugarcane germplasm in the USDA-ARS National Plant Germplasm System collection using single-dose SNP markers

Transposable elements: multifunctional players in the plant genome

The interactome of histone deacetylase HDA19 in dark-grown Arabidopsis seedlings

Editorial: Exploring the genetic potential of Thinopyrum species in wheat and durum wheat improvement

Cold stress induces differential gene expression of retained homeologs in Camelina sativa cv Suneson

The unequal functional redundancy of Arabidopsis INCURVATA11 and CUPULIFORMIS2 is not dependent on genetic background

Exploring the genetic landscape of nitrogen uptake in durum wheat: genome-wide characterization and expression profiling of NPF and NRT2 gene families

Development of genomic resources for Rhodes grass (Chloris gayana), draft genome and annotated variant discovery

Long read transcriptome sequencing of a sugarcane hybrid and its progenitors, Saccharum officinarum and S. spontaneum

A first look at the ability to use genomic prediction for improving the ratooning ability of sugarcane

Major transcriptomic differences are induced by warmer temperature conditions experienced during asexual and sexual reproduction in Fragaria vesca ecotypes

Development of Omni InDel and supporting database for maize

Allelic expression of AhNSP2-B07 due to parent of origin affects peanut nodulation

Exploring the crop epigenome: a comparison of DNA methylation profiling techniques

BOS1 is a basic helix–loop–helix transcription factor involved in regulating panicle development in rice

Domesticating Vigna stipulacea: Chromosome-Level genome assembly reveals VsPSAT1 as a candidate gene decreasing hard-seededness