Frontiers in Plant Science | Plant Systems and Synthetic Biology

Original Research

Published on 24 Mar 2022

Cytochrome P450 Monooxygenase/Cytochrome P450 Reductase Bi-Enzymatic System Isolated From Ilex asprella for Regio-Specific Oxidation of Pentacyclic Triterpenoids

in Plant Systems and Synthetic Biology

Le Li
Shumin Lin
Yuanyuan Chen
Yaqin Wang
Luhua Xiao
Xiaofang Ye
Lei Sun
Ruoting Zhan
Hui Xu

Frontiers in Plant Science

doi 10.3389/fpls.2022.831401

4,959 views
10 citations

Editorial

Published on 21 Mar 2022

Editorial: A Systems View of Plant Cellular Communication

in Plant Systems and Synthetic Biology

Dario Di Silvestre
Luca Tadini
Andrea Trotta
Luis Valledor
Ghasem Hosseini Salekdeh
Jesus V. Jorrin Novo

Frontiers in Plant Science

doi 10.3389/fpls.2022.875046

1,809 views
1 citation

Original Research

Published on 09 Mar 2022

Comparison of Metabolome and Transcriptome of Flavonoid Biosynthesis in Two Colors of Coreopsis tinctoria Nutt.

in Plant Systems and Synthetic Biology

Hong Jiang
Zhiyuan Li
Xiumei Jiang
Yong Qin

Frontiers in Plant Science

doi 10.3389/fpls.2022.810422

4,570 views
9 citations

Original Research

Published on 17 Feb 2022

Elucidation of Triacylglycerol Overproduction in the C4 Bioenergy Crop Sorghum bicolor by Constraint-Based Analysis

in Plant Systems and Synthetic Biology

Teresa J. Clark
Jorg Schwender

Frontiers in Plant Science

doi 10.3389/fpls.2022.787265

4,638 views
11 citations

Original Research

Published on 16 Feb 2022

Design and Analysis of Native Photorespiration Gene Motifs of Promoter Untranslated Region Combinations Under Short Term Abiotic Stress Conditions

in Plant Systems and Synthetic Biology

Debarati Basu
Paul F. South

Frontiers in Plant Science

doi 10.3389/fpls.2022.828729

6,370 views
5 citations

Editorial

Published on 21 Jan 2022

Editorial: Resolving the Complexity of Plant Genomes and Transcriptomes With Long Reads

in Plant Systems and Synthetic Biology

Agnieszka Zmienko
Pawel Wojciechowski
Marek Figlerowicz

Frontiers in Plant Science

doi 10.3389/fpls.2021.832257

2,444 views
2 citations

Original Research

Published on 04 Jan 2022

A Mathematical Model for Characterizing the Biomass and the Physiological/Biochemical Indicators of Salvia miltiorrhiza Based on Growth-Defense Tradeoff

in Plant Systems and Synthetic Biology

Ke Wang
Zhu-Yun Yan
Yuntong Ma
Bo Li
Wei Wang
Luming Qi
Hongmei Jia
Na Li
Zhun Wang

Frontiers in Plant Science

doi 10.3389/fpls.2021.793574

3,103 views
4 citations

Original Research

Published on 04 Jan 2022

Multiplexed Genome Editing via an RNA Polymerase II Promoter-Driven sgRNA Array in the Diatom Phaeodactylum tricornutum: Insights Into the Role of StLDP

in Plant Systems and Synthetic Biology

Yogesh Taparia
Achintya Kumar Dolui
Sammy Boussiba
Inna Khozin-Goldberg

Frontiers in Plant Science

doi 10.3389/fpls.2021.784780

7,128 views
22 citations

Original Research

Published on 14 Dec 2021

De novo Whole-Genome Assembly of Moringa oleifera Helps Identify Genes Regulating Drought Stress Tolerance

in Plant Systems and Synthetic Biology

P Sushree Shyamli
Seema Pradhan
Mitrabinda Panda
Ajay Parida

Frontiers in Plant Science

doi 10.3389/fpls.2021.766999

8,479 views
29 citations

Methods

Published on 01 Dec 2021

ecc_finder: A Robust and Accurate Tool for Detecting Extrachromosomal Circular DNA From Sequencing Data

in Plant Systems and Synthetic Biology

Panpan Zhang
Haoran Peng
Christel Llauro
Etienne Bucher
Marie Mirouze

Frontiers in Plant Science

doi 10.3389/fpls.2021.743742

14,037 views
60 citations

Review

Published on 29 Nov 2021

Plant Copper Metalloenzymes As Prospects for New Metabolism Involving Aromatic Compounds

in Plant Systems and Synthetic Biology

Lisa S. Mydy
Desnor N. Chigumba
Roland D. Kersten

Frontiers in Plant Science

doi 10.3389/fpls.2021.692108

10,235 views
30 citations

Original Research

Published on 22 Nov 2021

Centromere-Specific Retrotransposons and Very-Long-Chain Fatty Acid Biosynthesis in the Genome of Yellowhorn (Xanthoceras sorbifolium, Sapindaceae), an Oil-Producing Tree With Significant Drought Resistance

in Plant Systems and Synthetic Biology

Hui Liu
Xue-Mei Yan
Xin-rui Wang
Dong-Xu Zhang
Qingyuan Zhou
Tian-Le Shi
Kai-Hua Jia
Xue-Chan Tian
Shan-Shan Zhou
Ren-Gang Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2021.766389

7,551 views
13 citations

Review

Published on 28 Oct 2021

Anthocyanins: From Mechanisms of Regulation in Plants to Health Benefits in Foods

in Plant Systems and Synthetic Biology

Francesca Cappellini
Alessandra Marinelli
Marta Toccaceli
Chiara Tonelli
Katia Petroni

Frontiers in Plant Science

doi 10.3389/fpls.2021.748049

20,507 views
144 citations

Original Research

Published on 04 Oct 2021

Probing Light-Dependent Regulation of the Calvin Cycle Using a Multi-Omics Approach

in Plant Systems and Synthetic Biology

Nathaphon Yu King Hing
Uma K. Aryal
John A. Morgan

Frontiers in Plant Science

doi 10.3389/fpls.2021.733122

7,556 views
10 citations

Editorial

Published on 24 Sep 2021

Editorial: Mobile Elements and Plant Genome Evolution, Comparative Analyzes and Computational Tools

in Plant Systems and Synthetic Biology

Ruslan Kalendar
Francois Sabot
Fernando Rodriguez
Gennady I. Karlov
Lucia Natali
Karine Alix

Frontiers in Plant Science

doi 10.3389/fpls.2021.735134

4,747 views
17 citations

Original Research

Published on 08 Sep 2021

Genome Assembly and Sex-Determining Region of Male and Female Populus × sibirica

in Plant Systems and Synthetic Biology

Nataliya V. Melnikova
Elena N. Pushkova
Ekaterina M. Dvorianinova
Artemy D. Beniaminov
Roman O. Novakovskiy
Liubov V. Povkhova
Nadezhda L. Bolsheva
Anastasiya V. Snezhkina
Anna V. Kudryavtseva
George S. Krasnov

Frontiers in Plant Science

doi 10.3389/fpls.2021.625416

6,682 views
15 citations

Review

Published on 03 Sep 2021

Data Management and Modeling in Plant Biology

in Plant Systems and Synthetic Biology

Maria Krantz
David Zimmer
Stephan O. Adler
Anastasia Kitashova
Edda Klipp
Timo Mühlhaus
Thomas Nägele

Frontiers in Plant Science

doi 10.3389/fpls.2021.717958

8,201 views
15 citations

Original Research

Published on 31 Aug 2021

Network Inference of Transcriptional Regulation in Germinating Low Phytic Acid Soybean Seeds

in Plant Systems and Synthetic Biology

Lindsay C. DeMers
Victor Raboy
Song Li
M. A. Saghai Maroof

Frontiers in Plant Science

doi 10.3389/fpls.2021.708286

4,559 views
9 citations

Review

Published on 24 Aug 2021

Utilizing Plant Synthetic Biology to Improve Human Health and Wellness

in Plant Systems and Synthetic Biology

Collin R. Barnum
Benjamin J. Endelman
Patrick M. Shih

Frontiers in Plant Science

doi 10.3389/fpls.2021.691462

20,380 views
32 citations

Original Research

Published on 19 Aug 2021

Arabidopsis-Based Dual-Layered Biological Network Analysis Elucidates Fully Modulated Pathways Related to Sugarcane Resistance on Biotrophic Pathogen Infection

in Plant Systems and Synthetic Biology

Hugo V. S. Rody
Luis E. A. Camargo
Silvana Creste
Marie-Anne Van Sluys
Loren H. Rieseberg
Claudia B. Monteiro-Vitorello

Frontiers in Plant Science

doi 10.3389/fpls.2021.707904

3,797 views
4 citations

Perspective

Published on 05 Aug 2021

Enhancing Our Understanding of Plant Cell-to-Cell Interactions Using Single-Cell Omics

in Plant Systems and Synthetic Biology

Sandra Thibivilliers
Marc Libault

Frontiers in Plant Science

doi 10.3389/fpls.2021.696811

6,362 views
18 citations

Original Research

Published on 26 Jul 2021

Complex Networks of Prion-Like Proteins Reveal Cross Talk Between Stress and Memory Pathways in Plants

in Plant Systems and Synthetic Biology

Sampurna Garai
Citu
Sneh L. Singla-Pareek
Sudhir K. Sopory
Charanpreet Kaur
Gitanjali Yadav

Frontiers in Plant Science

doi 10.3389/fpls.2021.707286

10,258 views
21 citations

Original Research

Published on 07 Jul 2021

The Wild Sugarcane and Sorghum Kinomes: Insights Into Expansion, Diversification, and Expression Patterns

in Plant Systems and Synthetic Biology

Alexandre Hild Aono
Ricardo José Gonzaga Pimenta
Ana Letycia Basso Garcia
Fernando Henrique Correr
Guilherme Kenichi Hosaka
Marishani Marin Carrasco
Cláudio Benício Cardoso-Silva
Melina Cristina Mancini
Danilo Augusto Sforça
Lucas Borges dos Santos

Frontiers in Plant Science

doi 10.3389/fpls.2021.668623

6,724 views
33 citations

Perspective

Published on 23 Jun 2021

RNA Viral Vectors for Accelerating Plant Synthetic Biology

in Plant Systems and Synthetic Biology

Arjun Khakhar
Daniel F. Voytas

Frontiers in Plant Science

doi 10.3389/fpls.2021.668580

11,019 views
29 citations

248 articles

articles

Cytochrome P450 Monooxygenase/Cytochrome P450 Reductase Bi-Enzymatic System Isolated From Ilex asprella for Regio-Specific Oxidation of Pentacyclic Triterpenoids

Editorial: A Systems View of Plant Cellular Communication

Comparison of Metabolome and Transcriptome of Flavonoid Biosynthesis in Two Colors of Coreopsis tinctoria Nutt.

Elucidation of Triacylglycerol Overproduction in the C4 Bioenergy Crop Sorghum bicolor by Constraint-Based Analysis

Design and Analysis of Native Photorespiration Gene Motifs of Promoter Untranslated Region Combinations Under Short Term Abiotic Stress Conditions

Editorial: Resolving the Complexity of Plant Genomes and Transcriptomes With Long Reads

A Mathematical Model for Characterizing the Biomass and the Physiological/Biochemical Indicators of Salvia miltiorrhiza Based on Growth-Defense Tradeoff

Multiplexed Genome Editing via an RNA Polymerase II Promoter-Driven sgRNA Array in the Diatom Phaeodactylum tricornutum: Insights Into the Role of StLDP

De novo Whole-Genome Assembly of Moringa oleifera Helps Identify Genes Regulating Drought Stress Tolerance

ecc_finder: A Robust and Accurate Tool for Detecting Extrachromosomal Circular DNA From Sequencing Data

Plant Copper Metalloenzymes As Prospects for New Metabolism Involving Aromatic Compounds

Centromere-Specific Retrotransposons and Very-Long-Chain Fatty Acid Biosynthesis in the Genome of Yellowhorn (Xanthoceras sorbifolium, Sapindaceae), an Oil-Producing Tree With Significant Drought Resistance

Anthocyanins: From Mechanisms of Regulation in Plants to Health Benefits in Foods

Probing Light-Dependent Regulation of the Calvin Cycle Using a Multi-Omics Approach

Editorial: Mobile Elements and Plant Genome Evolution, Comparative Analyzes and Computational Tools

Genome Assembly and Sex-Determining Region of Male and Female Populus × sibirica

Data Management and Modeling in Plant Biology

Network Inference of Transcriptional Regulation in Germinating Low Phytic Acid Soybean Seeds

Utilizing Plant Synthetic Biology to Improve Human Health and Wellness

Arabidopsis-Based Dual-Layered Biological Network Analysis Elucidates Fully Modulated Pathways Related to Sugarcane Resistance on Biotrophic Pathogen Infection

Enhancing Our Understanding of Plant Cell-to-Cell Interactions Using Single-Cell Omics

Complex Networks of Prion-Like Proteins Reveal Cross Talk Between Stress and Memory Pathways in Plants

The Wild Sugarcane and Sorghum Kinomes: Insights Into Expansion, Diversification, and Expression Patterns

RNA Viral Vectors for Accelerating Plant Synthetic Biology